USO31 | Kannapedia

General Information

Strain: USO31
RSP ID: RSP10233
Grower: CSU
Accession Date: May 13, 2016
Gender: Female
Strain Seek Version: V2

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Chemical Information*

Cannabinoid and Terpenoid information provided by our Partner Labs.

CANNABINOIDS

THC + THCA %: N/A
CBD + CBDA %: N/A
THCV + THCVA %: N/A
CBC + CBCA %: N/A
CBG + CBGA %: N/A
CBN + CBNA %: N/A

TERPENOIDS

α-Bisabolol %: N/A
Borneol %: N/A
Camphene %: N/A
Carene %: N/A
Caryophyllene oxide %: N/A
β-Carophyllene %: N/A
Fenchol %: N/A
Geraniol %: N/A
α-Humulene %: N/A
Limonene %: N/A
Linalool %: N/A
Myrcene %: N/A
α-Phellandrene %: N/A
Terpinolene %: N/A
α-Terpineol %: N/A
α-Terpinene %: N/A
γ-Terpinene %: N/A
Total Nerolidol %: N/A
Total Ocimene %: N/A
α-Pinene %: N/A
β-Pinene %: N/A

Genetic Information

View this strain on the Phylotree
Percent Heterozygosity: 1.21
Download VCF file: Here
Download FastQ Files: Read 1 Read 2
Plant Type: Type III

Bt/Bd ALLELE COVERAGE

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CBCAS COVERAGE

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Y-RATIO DISTRIBUTION

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VARIANTS (THCAS, CBDAS, and CBCAS)

Gene	HGVS.c	HGVS.p	Annotation	Annotation Impact	Contig	Contig Pos	Ref/Alt
CBDAS	c.221C>G	p.Thr74Ser	missense_variant	MODERATE	contig1772	2082447	C/G
CBDAS	c.1278A>T	p.Ser426Ser	synonymous_variant	LOW	contig1772	2083504	A/T
CBDAS	c.1341T>C	p.Ser447Ser	synonymous_variant	LOW	contig1772	2083567	T/C

NEAREST GENETIC RELATIVES TO USO31:

#	Relative	Genetic Distance
1	RSP10983-USO 31	4.51
2	RSP10981-USO 31	4.75
3	RSP10658-Lovrin	4.87
4	RSP10665-Santhica 27	4.96
5	RSP10056-Santhica27	5.32
6	RSP11046-Santhica27	5.59
7	RSP10667-Tygra	5.67
8	RSP11047-Santhica27	5.79
9	RSP10241-Monoica	5.85
10	RSP10661-Fedora 17	5.88
11	RSP10664-Futura 75	5.93
12	RSP11203-Fedora 17	5.93
13	RSP11204-Carmagnola USO 31	5.99
14	RSP10668-Ivory	6.38
15	RSP10235-Diana	6.41
16	RSP11207-Carmaleonte	6.42
17	RSP10659-Tisza	6.62
18	RSP11053-KYRG-21	6.88
19	RSP10978-Carmagnola	6.89
20	RSP10976-Carmagnola	6.93

NEAREST GENETIC RELATIVES TO BASE TREE:

#	Relative	Genetic Distance
1	RSP10981-USO 31	4.96
2	RSP10658-Lovrin	5.28
3	RSP10241-Monoica	5.68
4	RSP10667-Tygra	5.85
5	RSP11047-Santhica27	5.88
6	RSP10664-Futura 75	5.91
7	RSP10661-Fedora 17	5.96
8	RSP10668-Ivory	6.1
9	RSP10659-Tisza	6.72
10	RSP11044-Tisza	7.05
11	RSP10979-Carmagnola	7.29
12	RSP11037-Carmagnola	7.49
13	RSP11054-Kyrgyz Gold	7.59
14	RSP11051-KYRG-11	7.7
15	RSP10653-Jiangji	7.83
16	RSP10890-Feral	7.9
17	RSP11121-RKM-2018-029	9.37
18	RSP10997-Kimbo Slice	9.69
19	RSP10755-Recon	9.7
20	RSP11126-RKM-2018-034	9.75

MOST GENETICALLY DISTANT STRAINS FROM USO31:

#	Strain	Genetic Distance
1	RSP11312-Cherry Blossom	14.05
2	RSP11318-Cherry Blossom	13.79
3	RSP11323-Cherry Blossom	13.78
4	RSP11300-Cherry Blossom	13.53
5	RSP11331-Cherry Blossom	13.52
6	RSP11311-Cherry Blossom	13.49
7	RSP11301-Cherry Blossom	13.47
8	RSP11315-Cherry Blossom	13.15
9	RSP11298-Cherry Blossom	13.05
10	RSP11325-Cherry Blossom	13.02
11	RSP11308-Cherry Blossom	13.02
12	RSP11319-Cherry Blossom	13
13	RSP11299-Cherry Blossom	12.99
14	RSP11322-Cherry Blossom	12.99
15	RSP11334-Cherry Blossom	12.98
16	RSP11306-Cherry Blossom	12.97
17	RSP11335-Cherry Blossom	12.95
18	RSP11327-Cherry Blossom	12.9
19	RSP11332-Cherry Blossom	12.89
20	RSP11316-Cherry Blossom	12.83

NEAREST GENETIC RELATIVES IN PHYLOS DATASET:

Nearest Phylos Strain	Number of Overlapping SNPs	Concordance
SRR4450090	123	88

NEAREST GENETIC RELATIVES IN LYNCH DATASET:

Nearest Lynch Strain	Number of Overlapping SNPs	Concordance
SRR3495194	11	10

Blockchain Registration Information:

Transaction ID: 3a666144f2508230dd6174634d65a30b35988ca82942d9c0401a4b90b09289eb
Stamping Certificate: PDF
SHASUM Hash: 0cd30ec577accaf5c07e0c2141ab2ee0f252ef8c4e97e75bb9205e0417de9c54