Carmagnola | Kannapedia

General Information

Strain: Carmagnola
Sample: Carmagnola 5
RSP ID: RSP10655
Grower: CSU
Accession Date: February 15, 2017
Gender: Female
Strain Seek Version: V2

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Chemical Information*

Cannabinoid and Terpenoid information provided by our Partner Labs.

CANNABINOIDS

THC + THCA %: N/A
CBD + CBDA %: N/A
THCV + THCVA %: N/A
CBC + CBCA %: N/A
CBG + CBGA %: N/A
CBN + CBNA %: N/A

TERPENOIDS

α-Bisabolol %: N/A
Borneol %: N/A
Camphene %: N/A
Carene %: N/A
Caryophyllene oxide %: N/A
β-Carophyllene %: N/A
Fenchol %: N/A
Geraniol %: N/A
α-Humulene %: N/A
Limonene %: N/A
Linalool %: N/A
Myrcene %: N/A
α-Phellandrene %: N/A
Terpinolene %: N/A
α-Terpineol %: N/A
α-Terpinene %: N/A
γ-Terpinene %: N/A
Total Nerolidol %: N/A
Total Ocimene %: N/A
α-Pinene %: N/A
β-Pinene %: N/A

Genetic Information

View this strain on the Phylotree
Percent Heterozygosity: 1.15
Download VCF file: Here
Download FastQ Files: Read 1 Read 2
Download BAM file: BAM _index
Download Annotated Variants: ANNOTATED VCF _index
Plant Type: Type III

Bt/Bd ALLELE COVERAGE

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CBCAS COVERAGE

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Y-RATIO DISTRIBUTION

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VARIANTS (THCAS, CBDAS, and CBCAS)

Gene	HGVS.c	HGVS.p	Annotation	Annotation Impact	Contig	Contig Pos	Ref/Alt	Var Freq
CBDAS	c.221C>G	p.Thr74Ser	missense variant	MODERATE	contig1772	2082447	C/G	NGS:0.136 C90:0.057	0.136

NEAREST GENETIC RELATIVES TO Carmagnola:

#	Relative	Genetic Distance
1	RSP10978-Carmagnola	3.75
2	RSP10976-Carmagnola	3.94
3	RSP10979-Carmagnola	4.03
4	RSP11202-Carmagnola	4.2
5	RSP11039-Carmagnola	4.54
6	RSP10982-Carmagnola	4.59
7	RSP11037-Carmagnola	4.68
8	RSP10977-Carmagnola	4.84
9	RSP10980-Carmagnola	4.85
10	RSP11208-CS	5.47
11	RSP11204-Carmagnola USO 31	5.82
12	RSP10661-Fedora 17	6.64
13	RSP10658-Lovrin	6.66
14	RSP10235-Diana	6.7
15	RSP10665-Santhica 27	6.71
16	RSP11044-Tisza	6.86
17	RSP11045-Tisza	6.86
18	RSP10659-Tisza	7.01
19	RSP10056-Santhica27	7.12
20	RSP10241-Monoica	7.15

NEAREST GENETIC RELATIVES TO BASE TREE:

#	Relative	Genetic Distance
1	RSP10979-Carmagnola	3.92
2	RSP11037-Carmagnola	4.82
3	RSP10661-Fedora 17	6.61
4	RSP10658-Lovrin	6.68
5	RSP11044-Tisza	6.69
6	RSP10659-Tisza	6.76
7	RSP10664-Futura 75	6.93
8	RSP10668-Ivory	7.07
9	RSP10241-Monoica	7.07
10	RSP10667-Tygra	7.09
11	RSP11047-Santhica27	7.1
12	RSP10890-Feral	7.26
13	RSP11051-KYRG-11	7.34
14	RSP10981-USO 31	7.46
15	RSP11054-Kyrgyz Gold	7.62
16	RSP10653-Jiangji	8.46
17	RSP11050-Hermaphrodite ResearchSample2	9.11
18	RSP10680-Blueberry Cheesecake	9.31
19	RSP10684-Blueberry Cheesecake	9.32
20	RSP10755-Recon	9.33

MOST GENETICALLY DISTANT STRAINS FROM Carmagnola:

#	Strain	Genetic Distance
1	RSP11323-Cherry Blossom	13.51
2	RSP11301-Cherry Blossom	13.16
3	RSP11311-Cherry Blossom	13.03
4	RSP11312-Cherry Blossom	12.87
5	RSP11298-Cherry Blossom	12.79
6	RSP11318-Cherry Blossom	12.76
7	RSP11300-Cherry Blossom	12.63
8	RSP11334-Cherry Blossom	12.58
9	RSP11308-Cherry Blossom	12.5
10	RSP11309-Cherry Blossom	12.46
11	RSP11335-Cherry Blossom	12.43
12	RSP11328-Cherry Blossom	12.39
13	RSP11165-Escape Velocity	12.38
14	RSP11268-Unknown- Cherry Wine - 001	12.37
15	RSP11325-Cherry Blossom	12.31
16	RSP11270-Unknown- Cherry Wine - 003	12.27
17	RSP10938-Avidekel	12.13
18	RSP11269-Unknown- Cherry Wine - 002	12.12
19	RSP11174-AVIDEKEL 2 0	12.11
20	RSP11278-Queen Dream	12.11

NEAREST GENETIC RELATIVES IN PHYLOS DATASET:

Phylos Strain	Number of Overlapping SNPs	Concordance
SRR4448780	49	31

Blockchain Registration Information:

Transaction ID: 3c875efc7f37d0078da39ff968da5740cdf3354dbcf71082f45820c042e2ab9b
Stamping Certificate: PDF
SHASUM Hash: 8de9d897b1390995e1d386d799d1bebd7ab1273be858c0ac78a8fc79e8487319