Carmagnola

RSP10977
StrainSEEK Cannabis Certification Report

Accession Date:

July 17, 2017

General Information

Strain: Carmagnola
Sample: Carm_24_3_CSU
RSP ID: RSP10977
Grower: John McKay-Colorado State University
Accession Date: July 17, 2017
Gender: Female
Strain Seek Version: V2


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Chemical Information*


Cannabinoid and Terpenoid information provided by our Partner Labs.

CANNABINOIDS

THC + THCA %: N/A
CBD + CBDA %: N/A
THCV + THCVA %: N/A
CBC + CBCA %: N/A
CBG + CBGA %: N/A
CBN + CBNA %: N/A

TERPENOIDS

  • α-Bisabolol %: N/A
    Borneol %: N/A
    Camphene %: N/A
    Carene %: N/A
    Caryophyllene oxide %: N/A
    β-Carophyllene %: N/A
    Fenchol %: N/A
    Geraniol %: N/A
    α-Humulene %: N/A
    Limonene %: N/A
    Linalool %: N/A
  • Myrcene %: N/A
    α-Phellandrene %: N/A
    Terpinolene %: N/A
    α-Terpineol %: N/A
    α-Terpinene %: N/A
    γ-Terpinene %: N/A
    Total Nerolidol %: N/A
    Total Ocimene %: N/A
    α-Pinene %: N/A
    β-Pinene %: N/A

Genetic Information

View this strain on the Phylotree
Percent Heterozygosity: 1.03
Download VCF file: Here
Download FastQ Files: Read 1 Read 2
Download BAM file: BAM index
Download Annotated Variants: ANNOTATED VCF index
Plant Type: Type III

Bt/Bd ALLELE COVERAGE

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CBCAS COVERAGE


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Y-RATIO DISTRIBUTION


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VARIANTS (THCAS, CBDAS, and CBCAS)

Gene HGVS.c HGVS.p Annotation Annotation Impact Contig Contig Pos Ref/Alt Var Freq

NEAREST GENETIC RELATIVES TO Carmagnola:
# Relative Genetic Distance
1 RSP11037-Carmagnola 0.05
2 RSP10980-Carmagnola 0.07
3 RSP11039-Carmagnola 0.08
4 RSP10982-Carmagnola 0.16
5 RSP10978-Carmagnola 4.39
6 RSP10976-Carmagnola 4.45
7 RSP10979-Carmagnola 4.53
8 RSP10655-Carmagnola 4.84
9 RSP11202-Carmagnola 5.11
10 RSP11208-CS 6.22
11 RSP10664-Futura 75 6.41
12 RSP10665-Santhica 27 6.48
13 RSP10658-Lovrin 6.51
14 RSP11046-Santhica27 6.57
15 RSP11204-Carmagnola USO 31 6.6
16 RSP10235-Diana 6.6
17 RSP10661-Fedora 17 6.62
18 RSP10983-USO 31 6.64
19 RSP10056-Santhica27 6.65
20 RSP11047-Santhica27 6.67
NEAREST GENETIC RELATIVES TO BASE TREE:
# Relative Genetic Distance
1 RSP11037-Carmagnola 0.06
2 RSP10979-Carmagnola 4.72
3 RSP10664-Futura 75 6.42
4 RSP11047-Santhica27 6.49
5 RSP10658-Lovrin 6.59
6 RSP11044-Tisza 6.66
7 RSP10667-Tygra 6.74
8 RSP10659-Tisza 6.87
9 RSP10661-Fedora 17 6.88
10 RSP10981-USO 31 6.93
11 RSP10890-Feral 7.16
12 RSP10668-Ivory 7.26
13 RSP10241-Monoica 7.39
14 RSP11051-KYRG-11 7.52
15 RSP11054-Kyrgyz Gold 7.75
16 RSP10653-Jiangji 7.98
17 RSP10997-Kimbo Slice 8.4
18 RSP10755-Recon 8.97
19 RSP11121-RKM-2018-029 9.56
20 RSP11050-Hermaphrodite ResearchSample2 9.65
NEAREST GENETIC RELATIVES IN PHYLOS DATASET:
Phylos Strain Number of Overlapping SNPs Concordance
SRR4448780 46 31

Blockchain Registration Information:

Transaction ID: 5b14580ae1338b3def43914f9a20c5e94eaea1fd472a50e8fac95c90237de3a6
Stamping Certificate: PDF
SHASUM Hash: f6c4d0a2025c08ef2914d756352aabc2f7ec07a05e0c2cbf2884f8d7b01497a2