General Information
Chemical Information*
Cannabinoid and Terpenoid information provided by our Partner Labs.
CANNABINOIDS
THC + THCA %: N/A
CBD + CBDA %: N/A
THCV + THCVA %: N/A
CBC + CBCA %: N/A
CBG + CBGA %: N/A
CBN + CBNA %: N/A
TERPENOIDS
- α-Bisabolol %: N/A
Borneol %: N/A
Camphene %: N/A
Carene %: N/A
Caryophyllene oxide %: N/A
β-Carophyllene %: N/A
Fenchol %: N/A
Geraniol %: N/A
α-Humulene %: N/A
Limonene %: N/A
Linalool %: N/A
-
Myrcene %: N/A
α-Phellandrene %: N/A
Terpinolene %: N/A
α-Terpineol %: N/A
α-Terpinene %: N/A
γ-Terpinene %: N/A
Total Nerolidol %: N/A
Total Ocimene %: N/A
α-Pinene %: N/A
β-Pinene %: N/A
Genetic Information
View this strain on the Phylotree
Percent Heterozygosity: 1.03
Download VCF file: Here
Download FastQ Files: Read 1 Read 2
Download BAM file: BAM index
Download Annotated Variants: ANNOTATED VCF index
Plant Type: Type III
Percent Heterozygosity: 1.03
Download VCF file: Here
Download FastQ Files: Read 1 Read 2
Download BAM file: BAM index
Download Annotated Variants: ANNOTATED VCF index
Plant Type: Type III
CBCAS COVERAGE ![]() What does this visualization mean? |
Y-RATIO DISTRIBUTION ![]() What does this visualization mean? |
VARIANTS (THCAS, CBDAS, and CBCAS)
Gene | HGVS.c | HGVS.p | Annotation | Annotation Impact | Contig | Contig Pos | Ref/Alt | Var Freq |
---|
NEAREST GENETIC RELATIVES TO Carmagnola:
# | Relative | Genetic Distance |
---|---|---|
1 | RSP11037-Carmagnola | 0.05 | 2 | RSP10980-Carmagnola | 0.07 | 3 | RSP11039-Carmagnola | 0.08 | 4 | RSP10982-Carmagnola | 0.16 | 5 | RSP10978-Carmagnola | 4.39 | 6 | RSP10976-Carmagnola | 4.45 | 7 | RSP10979-Carmagnola | 4.53 | 8 | RSP10655-Carmagnola | 4.84 | 9 | RSP11202-Carmagnola | 5.11 | 10 | RSP11208-CS | 6.22 | 11 | RSP10664-Futura 75 | 6.41 | 12 | RSP10665-Santhica 27 | 6.48 | 13 | RSP10658-Lovrin | 6.51 | 14 | RSP11046-Santhica27 | 6.57 | 15 | RSP11204-Carmagnola USO 31 | 6.6 | 16 | RSP10235-Diana | 6.6 | 17 | RSP10661-Fedora 17 | 6.62 | 18 | RSP10983-USO 31 | 6.64 | 19 | RSP10056-Santhica27 | 6.65 | 20 | RSP11047-Santhica27 | 6.67 |
NEAREST GENETIC RELATIVES TO BASE TREE:
# | Relative | Genetic Distance |
---|---|---|
1 | RSP11037-Carmagnola | 0.06 | 2 | RSP10979-Carmagnola | 4.72 | 3 | RSP10664-Futura 75 | 6.42 | 4 | RSP11047-Santhica27 | 6.49 | 5 | RSP10658-Lovrin | 6.59 | 6 | RSP11044-Tisza | 6.66 | 7 | RSP10667-Tygra | 6.74 | 8 | RSP10659-Tisza | 6.87 | 9 | RSP10661-Fedora 17 | 6.88 | 10 | RSP10981-USO 31 | 6.93 | 11 | RSP10890-Feral | 7.16 | 12 | RSP10668-Ivory | 7.26 | 13 | RSP10241-Monoica | 7.39 | 14 | RSP11051-KYRG-11 | 7.52 | 15 | RSP11054-Kyrgyz Gold | 7.75 | 16 | RSP10653-Jiangji | 7.98 | 17 | RSP10997-Kimbo Slice | 8.4 | 18 | RSP10755-Recon | 8.97 | 19 | RSP11121-RKM-2018-029 | 9.56 | 20 | RSP11050-Hermaphrodite ResearchSample2 | 9.65 |
MOST GENETICALLY DISTANT STRAINS FROM Carmagnola:
# | Strain | Genetic Distance |
---|---|---|
1 | RSP11323-Cherry Blossom | 13.37 | 2 | RSP11312-Cherry Blossom | 13.31 | 3 | RSP11318-Cherry Blossom | 13.3 | 4 | RSP11300-Cherry Blossom | 13.08 | 5 | RSP11328-Cherry Blossom | 12.77 | 6 | RSP11269-Unknown- Cherry Wine - 002 | 12.63 | 7 | RSP11268-Unknown- Cherry Wine - 001 | 12.63 | 8 | RSP11311-Cherry Blossom | 12.61 | 9 | RSP11331-Cherry Blossom | 12.53 | 10 | RSP10938-Avidekel | 12.47 | 11 | RSP11298-Cherry Blossom | 12.46 | 12 | RSP11334-Cherry Blossom | 12.45 | 13 | RSP11321-Cherry Blossom | 12.41 | 14 | RSP11301-Cherry Blossom | 12.36 | 15 | RSP11316-Cherry Blossom | 12.35 | 16 | RSP11319-Cherry Blossom | 12.28 | 17 | RSP11310-Cherry Blossom | 12.28 | 18 | RSP11174-AVIDEKEL 2 0 | 12.24 | 19 | RSP11270-Unknown- Cherry Wine - 003 | 12.19 | 20 | RSP11309-Cherry Blossom | 12.18 |
NEAREST GENETIC RELATIVES IN PHYLOS DATASET:
Phylos Strain | Number of Overlapping SNPs | Concordance |
---|---|---|
SRR4448780 | 46 | 31 |
Blockchain Registration Information:
Transaction ID: 5b14580ae1338b3def43914f9a20c5e94eaea1fd472a50e8fac95c90237de3a6
Stamping Certificate: PDF
SHASUM Hash: f6c4d0a2025c08ef2914d756352aabc2f7ec07a05e0c2cbf2884f8d7b01497a2
Stamping Certificate: PDF
SHASUM Hash: f6c4d0a2025c08ef2914d756352aabc2f7ec07a05e0c2cbf2884f8d7b01497a2