Carmagnola

RSP10980
StrainSEEK Cannabis Certification Report

Accession Date:

July 17, 2017

General Information

Strain: Carmagnola
Sample: Carm_24_1_CSU
RSP ID: RSP10980
Grower: John McKay-Colorado State University
Accession Date: July 17, 2017
Gender: Female
Strain Seek Version: V2


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Chemical Information*


Cannabinoid and Terpenoid information provided by our Partner Labs.

CANNABINOIDS

THC + THCA %: N/A
CBD + CBDA %: N/A
THCV + THCVA %: N/A
CBC + CBCA %: N/A
CBG + CBGA %: N/A
CBN + CBNA %: N/A

TERPENOIDS

  • α-Bisabolol %: N/A
    Borneol %: N/A
    Camphene %: N/A
    Carene %: N/A
    Caryophyllene oxide %: N/A
    β-Carophyllene %: N/A
    Fenchol %: N/A
    Geraniol %: N/A
    α-Humulene %: N/A
    Limonene %: N/A
    Linalool %: N/A
  • Myrcene %: N/A
    α-Phellandrene %: N/A
    Terpinolene %: N/A
    α-Terpineol %: N/A
    α-Terpinene %: N/A
    γ-Terpinene %: N/A
    Total Nerolidol %: N/A
    Total Ocimene %: N/A
    α-Pinene %: N/A
    β-Pinene %: N/A

Genetic Information

View this strain on the Phylotree
Percent Heterozygosity: 1.01
Download VCF file: Here
Download FastQ Files: Read 1 Read 2
Download BAM file: BAM index
Download Annotated Variants: ANNOTATED VCF index
Plant Type: Type III

Bt/Bd ALLELE COVERAGE

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CBCAS COVERAGE


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Y-RATIO DISTRIBUTION


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VARIANTS (THCAS, CBDAS, and CBCAS)

Gene HGVS.c HGVS.p Annotation Annotation Impact Contig Contig Pos Ref/Alt Var Freq


NEAREST GENETIC RELATIVES TO Carmagnola:
# Relative Genetic Distance
1 RSP10977-Carmagnola 0.07
2 RSP11037-Carmagnola 0.08
3 RSP11039-Carmagnola 0.1
4 RSP10982-Carmagnola 0.11
5 RSP10978-Carmagnola 4.36
6 RSP10976-Carmagnola 4.6
7 RSP10979-Carmagnola 4.8
8 RSP10655-Carmagnola 4.85
9 RSP11202-Carmagnola 5.02
10 RSP11208-CS 5.98
11 RSP11204-Carmagnola USO 31 6.45
12 RSP10056-Santhica27 6.48
13 RSP10235-Diana 6.55
14 RSP10658-Lovrin 6.65
15 RSP11046-Santhica27 6.7
16 RSP10664-Futura 75 6.7
17 RSP11047-Santhica27 6.74
18 RSP10665-Santhica 27 6.78
19 RSP10661-Fedora 17 6.79
20 RSP11044-Tisza 6.88
NEAREST GENETIC RELATIVES TO BASE TREE:
# Relative Genetic Distance
1 RSP11037-Carmagnola 0.09
2 RSP10979-Carmagnola 5.01
3 RSP10658-Lovrin 6.55
4 RSP11047-Santhica27 6.66
5 RSP10664-Futura 75 6.78
6 RSP10667-Tygra 6.79
7 RSP11044-Tisza 6.9
8 RSP10661-Fedora 17 6.97
9 RSP10659-Tisza 7.13
10 RSP10981-USO 31 7.14
11 RSP10890-Feral 7.25
12 RSP10668-Ivory 7.32
13 RSP11051-KYRG-11 7.34
14 RSP10241-Monoica 7.61
15 RSP11054-Kyrgyz Gold 7.8
16 RSP10653-Jiangji 8.18
17 RSP10997-Kimbo Slice 8.84
18 RSP10755-Recon 8.92
19 RSP11000-Liberty Haze 9.51
20 RSP11121-RKM-2018-029 9.72
NEAREST GENETIC RELATIVES IN PHYLOS DATASET:
Phylos Strain Number of Overlapping SNPs Concordance
SRR4448780 49 34

Blockchain Registration Information:

Transaction ID: cc1c3534b46af787f9f34db17ac54601aa067eaca99be12867060c929adb34ca
Stamping Certificate: PDF
SHASUM Hash: 2b0cb42b290f310c468e3883d331fe534a7da378dc269a20738a5013f8ecb983