Carmagnola

RSP11039
StrainSEEK Cannabis Certification Report

Accession Date:

November 20, 2017

General Information

Strain: Carmagnola
Sample: Carm_24_2_CSU
RSP ID: RSP11039
Grower: John McKay-Colorado State University
Accession Date: November 20, 2017
Gender: Female
Strain Seek Version: V2


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Chemical Information*


Cannabinoid and Terpenoid information provided by our Partner Labs.

CANNABINOIDS

THC + THCA %: N/A
CBD + CBDA %: N/A
THCV + THCVA %: N/A
CBC + CBCA %: N/A
CBG + CBGA %: N/A
CBN + CBNA %: N/A

TERPENOIDS

  • α-Bisabolol %: N/A
    Borneol %: N/A
    Camphene %: N/A
    Carene %: N/A
    Caryophyllene oxide %: N/A
    β-Carophyllene %: N/A
    Fenchol %: N/A
    Geraniol %: N/A
    α-Humulene %: N/A
    Limonene %: N/A
    Linalool %: N/A
  • Myrcene %: N/A
    α-Phellandrene %: N/A
    Terpinolene %: N/A
    α-Terpineol %: N/A
    α-Terpinene %: N/A
    γ-Terpinene %: N/A
    Total Nerolidol %: N/A
    Total Ocimene %: N/A
    α-Pinene %: N/A
    β-Pinene %: N/A

Genetic Information

View this strain on the Phylotree
Percent Heterozygosity: 1.11
Download VCF file: Here
Download FastQ Files: Read 1 Read 2
Download BAM file: BAM index
Download Annotated Variants: ANNOTATED VCF index
Plant Type: Type III

Bt/Bd ALLELE COVERAGE

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CBCAS COVERAGE


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Y-RATIO DISTRIBUTION


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VARIANTS (THCAS, CBDAS, and CBCAS)

Gene HGVS.c HGVS.p Annotation Annotation Impact Contig Contig Pos Ref/Alt Var Freq


NEAREST GENETIC RELATIVES TO Carmagnola:
# Relative Genetic Distance
1 RSP11037-Carmagnola 0.07
2 RSP10977-Carmagnola 0.08
3 RSP10980-Carmagnola 0.1
4 RSP10982-Carmagnola 0.17
5 RSP10978-Carmagnola 4.18
6 RSP10976-Carmagnola 4.26
7 RSP10655-Carmagnola 4.54
8 RSP10979-Carmagnola 4.6
9 RSP11202-Carmagnola 4.91
10 RSP10665-Santhica 27 6.11
11 RSP11208-CS 6.13
12 RSP11204-Carmagnola USO 31 6.23
13 RSP10056-Santhica27 6.23
14 RSP11044-Tisza 6.29
15 RSP10235-Diana 6.31
16 RSP11046-Santhica27 6.38
17 RSP11045-Tisza 6.45
18 RSP10664-Futura 75 6.49
19 RSP10658-Lovrin 6.55
20 RSP11047-Santhica27 6.55
NEAREST GENETIC RELATIVES TO BASE TREE:
# Relative Genetic Distance
1 RSP11037-Carmagnola 0.1
2 RSP10979-Carmagnola 4.82
3 RSP11047-Santhica27 6.41
4 RSP11044-Tisza 6.42
5 RSP10664-Futura 75 6.53
6 RSP10658-Lovrin 6.63
7 RSP10667-Tygra 6.77
8 RSP10981-USO 31 6.84
9 RSP10659-Tisza 6.92
10 RSP10890-Feral 7
11 RSP10668-Ivory 7.06
12 RSP10661-Fedora 17 7.09
13 RSP11051-KYRG-11 7.21
14 RSP10241-Monoica 7.31
15 RSP10653-Jiangji 7.72
16 RSP11054-Kyrgyz Gold 7.76
17 RSP10997-Kimbo Slice 8.51
18 RSP10755-Recon 9.04
19 RSP11126-RKM-2018-034 9.24
20 RSP11000-Liberty Haze 9.25
NEAREST GENETIC RELATIVES IN PHYLOS DATASET:
Phylos Strain Number of Overlapping SNPs Concordance
SRR4448780 42 30

Blockchain Registration Information:

Transaction ID: 0e5a4cafb49fd5c8c222a7f021f897f3f64816309f8c21d536c78208d6806565
Stamping Certificate: PDF
SHASUM Hash: d252dea9d5075793e490595a13b92ed63d342803b3ab3f84bebef8ebafb03396