General Information
Chemical Information*
Cannabinoid and Terpenoid information provided by our Partner Labs.
CANNABINOIDS
THC + THCA %: N/A
CBD + CBDA %: N/A
THCV + THCVA %: N/A
CBC + CBCA %: N/A
CBG + CBGA %: N/A
CBN + CBNA %: N/A
TERPENOIDS
- α-Bisabolol %: N/A
Borneol %: N/A
Camphene %: N/A
Carene %: N/A
Caryophyllene oxide %: N/A
β-Carophyllene %: N/A
Fenchol %: N/A
Geraniol %: N/A
α-Humulene %: N/A
Limonene %: N/A
Linalool %: N/A
-
Myrcene %: N/A
α-Phellandrene %: N/A
Terpinolene %: N/A
α-Terpineol %: N/A
α-Terpinene %: N/A
γ-Terpinene %: N/A
Total Nerolidol %: N/A
Total Ocimene %: N/A
α-Pinene %: N/A
β-Pinene %: N/A
Genetic Information
View this strain on the Phylotree
Percent Heterozygosity: 1.34
Download VCF file: Here
Download FastQ Files: Read 1 Read 2
Download BAM file: BAM
Plant Type: Type I
Percent Heterozygosity: 1.34
Download VCF file: Here
Download FastQ Files: Read 1 Read 2
Download BAM file: BAM
Plant Type: Type I
CBCAS COVERAGE ![]() What does this visualization mean? |
Y-RATIO DISTRIBUTION ![]() What does this visualization mean? |
VARIANTS (THCAS, CBDAS, and CBCAS)
Gene | HGVS.c | HGVS.p | Annotation | Annotation Impact | Contig | Contig Pos | Ref/Alt | Var Freq | |
---|---|---|---|---|---|---|---|---|---|
THCAS | c.1229G>A | p.Gly410Glu | missense variant | MODERATE | contig741 | 4416599 | C/T | NGS:0.039 C90:0.000 | 0.039 |
THCAS | c.749C>A | p.Ala250Asp | missense variant | MODERATE | contig741 | 4417079 | G/T | NGS:0.127 C90:0.632 | 0.127 |
THCAS | c.373G>C | p.Val125Leu | missense variant | MODERATE | contig741 | 4417455 | C/G | NGS:0.050 C90:0.000 | 0.05 |
NEAREST GENETIC RELATIVES TO RKM-2018-023:
# | Relative | Genetic Distance |
---|---|---|
1 | RSP10942-Erez | 6.15 | 2 | RSP11171-Alaska USA | 6.2 | 3 | RSP11038-Skunk 18 | 6.37 | 4 | RSP11119-RKM-2018-027 | 6.43 | 5 | RSP11030-Skunk 18 | 6.46 | 6 | RSP10603-Black Jack | 6.5 | 7 | RSP10460-Cheese | 6.55 | 8 | RSP10996-Durban Poison 1 | 6.6 | 9 | RSP10763-Serious Happiness | 6.67 | 10 | RSP11346-BLACK JACK | 6.68 | 11 | RSP11116-RKM-2018-024 | 6.74 | 12 | RSP11014-Durban Poison | 6.77 | 13 | RSP11127-Jamaican Lions Ancestor | 6.82 | 14 | RSP11110-RKM-2018-018 | 6.87 | 15 | RSP10998-Durban Poison | 6.88 | 16 | RSP11000-Liberty Haze | 6.89 | 17 | RSP10946-Liberty Haze | 6.89 | 18 | RSP11098-RKM-2018-007 | 6.95 | 19 | RSP11041-Gold Cracker | 6.95 | 20 | RSP11347-Jacks Cleaner | 6.97 |
NEAREST GENETIC RELATIVES TO BASE TREE:
# | Relative | Genetic Distance |
---|---|---|
1 | RSP11038-Skunk 18 | 6.38 | 2 | RSP11119-RKM-2018-027 | 6.39 | 3 | RSP11000-Liberty Haze | 6.49 | 4 | RSP11014-Durban Poison | 6.74 | 5 | RSP11110-RKM-2018-018 | 6.84 | 6 | RSP11048-Gold Cracker | 7.05 | 7 | RSP10991-Golden Goat 2 | 7.08 | 8 | RSP11094-RKM-2018-003 | 7.09 | 9 | RSP11002-CST | 7.61 | 10 | RSP11034-Italian Kiss | 7.64 | 11 | RSP10684-Blueberry Cheesecake | 7.79 | 12 | RSP11121-RKM-2018-029 | 7.88 | 13 | RSP11033-Blue Dream | 7.89 | 14 | RSP11049-Hermaphrodite Research Sample1 | 7.91 | 15 | RSP11134-Cbot-2019-006 | 7.93 | 16 | RSP11120-RKM-2018-028 | 8.06 | 17 | RSP11035-Black Beauty | 8.06 | 18 | RSP10989-UP Sunrise | 8.07 | 19 | RSP11112-RKM-2018-020 | 8.24 | 20 | RSP11050-Hermaphrodite ResearchSample2 | 8.36 |
MOST GENETICALLY DISTANT STRAINS FROM RKM-2018-023:
# | Strain | Genetic Distance |
---|---|---|
1 | RSP11317-Cherry Blossom | 13.95 | 2 | RSP11333-Cherry Blossom | 13.74 | 3 | RSP11323-Cherry Blossom | 13.6 | 4 | RSP11314-Cherry Blossom | 13.56 | 5 | RSP11328-Cherry Blossom | 13.53 | 6 | RSP11311-Cherry Blossom | 13.4 | 7 | RSP11324-Cherry Blossom | 13.31 | 8 | RSP11334-Cherry Blossom | 13.12 | 9 | RSP11306-Cherry Blossom | 13.08 | 10 | RSP11268-Unknown- Cherry Wine - 001 | 13.04 | 11 | RSP11308-Cherry Blossom | 12.84 | 12 | RSP11335-Cherry Blossom | 12.79 | 13 | RSP11330-Cherry Blossom | 12.74 | 14 | RSP11329-Cherry Blossom | 12.74 | 15 | RSP11325-Cherry Blossom | 12.71 | 16 | RSP11303-Cherry Blossom CBG | 12.55 | 17 | RSP11133-Cbot-2019-005 | 12.53 | 18 | RSP11301-Cherry Blossom | 12.52 | 19 | RSP11213-80E | 12.51 | 20 | RSP11327-Cherry Blossom | 12.5 |
NEAREST GENETIC RELATIVES IN PHYLOS DATASET:
Phylos Strain | Number of Overlapping SNPs | Concordance |
---|---|---|
SRR8349125 | 94 | 61 |
NEAREST GENETIC RELATIVES IN LYNCH DATASET:
Nearest Lynch Strain | Number of Overlapping SNPs | Concordance |
---|---|---|
SRR3495216 | 11 | 9 |
Blockchain Registration Information:
Transaction ID: c39fac25b74381f4a7478b3127611ca4e7046b6e12817c75b9285f41bd0e4c77
Stamping Certificate: PDF
SHASUM Hash: 91c6309f67882a520d72c32a502719a323ff076e7b47f80334821d2cd2a7a221
Stamping Certificate: PDF
SHASUM Hash: 91c6309f67882a520d72c32a502719a323ff076e7b47f80334821d2cd2a7a221