Blue Dream

RSP11342
StrainSEEK Cannabis Certification Report

Accession Date:

October 18, 2019

Summary

Blue Dream (RSP11342/Happy Valley) is a genetic Type I plant and its genetics appear common. The sample's closest relative in the database is Blue Dream (RSP11005/Native Roots) and it is a probable clone. The heterozygosity rate is 0.91% which is lower than average (15.9 percentile).

General Information

Strain: Blue Dream
RSP ID: RSP11342
Grower: Happy Valley
Accession Date: October 18, 2019
Gender: Female
Strain Seek Version: V2


What does this visualization mean?

Chemical Information*


Cannabinoid and Terpenoid information provided by our Partner Labs.

CANNABINOIDS

THC + THCA %: N/A
CBD + CBDA %: N/A
THCV + THCVA %: N/A
CBC + CBCA %: N/A
CBG + CBGA %: N/A
CBN + CBNA %: N/A

TERPENOIDS

  • α-Bisabolol %: N/A
    Borneol %: N/A
    Camphene %: N/A
    Carene %: N/A
    Caryophyllene oxide %: N/A
    β-Carophyllene %: N/A
    Fenchol %: N/A
    Geraniol %: N/A
    α-Humulene %: N/A
    Limonene %: N/A
    Linalool %: N/A
  • Myrcene %: N/A
    α-Phellandrene %: N/A
    Terpinolene %: N/A
    α-Terpineol %: N/A
    α-Terpinene %: N/A
    γ-Terpinene %: N/A
    Total Nerolidol %: N/A
    Total Ocimene %: N/A
    α-Pinene %: N/A
    β-Pinene %: N/A

Genetic Information

View this strain on the Phylotree
Percent Heterozygosity: 0.91
Download VCF file: Here
Download FastQ Files: Read 1 Read 2
Download BAM file: BAM index
Download Annotated Variants: ANNOTATED VCF index
Plant Type: Type I

Bt/Bd ALLELE COVERAGE

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CBCAS COVERAGE


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Y-RATIO DISTRIBUTION


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VARIANTS (THCAS, CBDAS, and CBCAS)

Gene HGVS.c HGVS.p Annotation Annotation Impact Contig Contig Pos Ref/Alt Var Freq
THCASc.187A>Cp.Ile63Leumissense variantMODERATEcontig7414417641

IGV:Start|Jump

T/G

NGS:0.059

C90:0.679

0.059



VARIANTS (SELECT GENES OF INTEREST)

Gene HGVS.c HGVS.p Annotation Annotation Impact Contig Contig Pos Ref/Alt Var Freq
PKSG-2a

UNIPROT

c.67T>Ap.Phe23Ilemissense variantMODERATEcontig7001945567

IGV:Start|Jump

A/T

NGS:0.825

C90:0.904

0.825
PKSG-2a

UNIPROT

c.31A>Tp.Thr11Sermissense variantMODERATEcontig7001945603

IGV:Start|Jump

T/A

NGS:0.763

C90:0.876

0.763
PKSG-2b

UNIPROT

c.1152T>Ap.Asn384Lysmissense variantMODERATEcontig7001950486

IGV:Start|Jump

A/T

NGS:0.715

C90:0.895

0.715
PKSG-2b

UNIPROT

c.1132C>Gp.Leu378Valmissense variantMODERATEcontig7001950506

IGV:Start|Jump

G/C

NGS:0.717

C90:0.000

0.717
PKSG-2b

UNIPROT

c.1117A>Gp.Ile373Valmissense variantMODERATEcontig7001950521

IGV:Start|Jump

T/C

NGS:0.807

C90:0.981

0.807
PKSG-2b

UNIPROT

c.31A>Tp.Thr11Sermissense variantMODERATEcontig7001951851

IGV:Start|Jump

T/A

NGS:0.844

C90:0.880

0.844
PKSG-2b

UNIPROT

c.-2_1dupATAstart lost&conservative inframe insertionHIGHcontig7001951880

IGV:Start|Jump

A/ATAT

NGS:0.410

C90:0.000

0.41
PKSG-4b

UNIPROT

c.489delTp.Phe163fsframeshift variantHIGHcontig7002721183

IGV:Start|Jump

CA/C

NGS:0.792

C90:0.761

0.792
PKSG-4b

UNIPROT

c.353_354insCCp.Gly119fsframeshift variantHIGHcontig7002721319

IGV:Start|Jump

T/TGG

NGS:0.175

C90:0.000

0.175
aPT4

UNIPROT

c.35A>Cp.Gln12Promissense variantMODERATEcontig1212828691

IGV:Start|Jump

A/C

NGS:0.075

C90:0.000

0.075
aPT4

UNIPROT

c.97T>Cp.Tyr33Hismissense variantMODERATEcontig1212828753

IGV:Start|Jump

T/C

NGS:0.439

C90:0.000

0.439
aPT4

UNIPROT

c.153A>Cp.Lys51Asnmissense variantMODERATEcontig1212828809

IGV:Start|Jump

A/C

NGS:0.375

C90:0.000

0.375
aPT4

UNIPROT

c.775delTp.Tyr259fsframeshift variantHIGHcontig1212831380

IGV:Start|Jump

AT/A

NGS:0.224

C90:0.000

0.224
aPT4

UNIPROT

c.1168T>Cp.Tyr390Hismissense variantMODERATEcontig1212833503

IGV:Start|Jump

T/C

NGS:0.546

C90:0.000

0.546
aPT1

UNIPROT

c.406A>Gp.Ile136Valmissense variantMODERATEcontig1212839605

IGV:Start|Jump

A/G

NGS:0.579

C90:0.761

0.579
aPT1

UNIPROT

c.629C>Tp.Thr210Ilemissense variantMODERATEcontig1212840237

IGV:Start|Jump

C/T

NGS:0.561

C90:0.598

0.561
HDS-2

UNIPROT

c.82_93delGTAACCGGAACTp.Val28_Thr31delconservative inframe deletionMODERATEcontig951989748

IGV:Start|Jump

CGTAACCGGAACT/C

NGS:0.805

C90:0.000

0.805
HDS-2

UNIPROT

c.127T>Gp.Ser43Alamissense variantMODERATEcontig951989794

IGV:Start|Jump

T/G

NGS:0.721

C90:0.000

0.721


NEAREST GENETIC RELATIVES TO Blue Dream:
# Relative Genetic Distance
1 RSP11005-Blue Dream 0
2 RSP11008-Blue Dream 0
3 RSP11227-Blue Dream 0.02
4 RSP11032-Blue Dream 0.05
5 RSP11031-Snoops Dream 0.06
6 RSP11003-Snoops Dream 0.06
7 RSP11033-Blue Dream 0.06
8 RSP11012-Blue Dream 0.07
9 RSP11011-Super Blue Dream 0.09
10 RSP11017-Blue Dream 0.09
11 RSP11007-Blue Dream 0.1
12 RSP11009-Blue Dream 0.12
13 RSP11004-Blue Dream 0.14
14 RSP11006-Blue Dream 0.15
15 RSP11010-Blue Dream 0.34
16 RSP10989-UP Sunrise 5.14
17 RSP10940-OR 5.36
18 RSP10763-Serious Happiness 5.4
19 RSP10990-Italian Kiss 5.51
20 RSP11034-Italian Kiss 5.62
NEAREST GENETIC RELATIVES TO BASE TREE:
# Relative Genetic Distance
1 RSP11033-Blue Dream 0.06
2 RSP10991-Golden Goat 2 5.34
3 RSP10989-UP Sunrise 5.45
4 RSP11034-Italian Kiss 5.78
5 RSP11048-Gold Cracker 5.92
6 RSP11100-RKM-2018-009 6.12
7 RSP11002-CST 6.25
8 RSP11119-RKM-2018-027 6.37
9 RSP11049-Hermaphrodite Research Sample1 6.61
10 RSP11110-RKM-2018-018 6.9
11 RSP10551-Sour Raspberry 7.01
12 RSP11097-RKM-2018-006 7.09
13 RSP11014-Durban Poison 7.19
14 RSP11121-RKM-2018-029 7.43
15 RSP11094-RKM-2018-003 7.47
16 RSP11125-RKM-2018-033 7.56
17 RSP11075-JL yellow 7.61
18 RSP10684-Blueberry Cheesecake 7.64
19 RSP11124-RKM-2018-032 7.69
20 RSP11112-RKM-2018-020 7.74
NEAREST GENETIC RELATIVES IN PHYLOS DATASET:
Phylos Strain Number of Overlapping SNPs Concordance
SRR4448372 66 65
NEAREST GENETIC RELATIVES IN LYNCH DATASET:
Nearest Lynch Strain Number of Overlapping SNPs Concordance
SRR3495273 7 7

Blockchain Registration Information:

Transaction ID: c456ab2e1e5c9a60bf4cf3bf3ca8a18c125a3139ef28354a9b2b52ca69d1bcd8
Stamping Certificate: PDF
SHASUM Hash: b4897c20a37189cece3dc1e19846756e1bc4abde41e9529cd2c21b7d46f39029