Summary
Rugburn OG (RSP11353/Happy Valley) is a genetic Type I plant and its genetics appear uncommon. The sample's closest relative in the database is 501st OG (RSP11241/Strong Agronomy) and it is a potential clone. The heterozygosity rate is 1.16% which is average (63.3 percentile).General Information
Chemical Information*
Cannabinoid and Terpenoid information provided by our Partner Labs.
CANNABINOIDS
THC + THCA %: N/A
CBD + CBDA %: N/A
THCV + THCVA %: N/A
CBC + CBCA %: N/A
CBG + CBGA %: N/A
CBN + CBNA %: N/A
TERPENOIDS
- α-Bisabolol %: N/A
Borneol %: N/A
Camphene %: N/A
Carene %: N/A
Caryophyllene oxide %: N/A
β-Carophyllene %: N/A
Fenchol %: N/A
Geraniol %: N/A
α-Humulene %: N/A
Limonene %: N/A
Linalool %: N/A
-
Myrcene %: N/A
α-Phellandrene %: N/A
Terpinolene %: N/A
α-Terpineol %: N/A
α-Terpinene %: N/A
γ-Terpinene %: N/A
Total Nerolidol %: N/A
Total Ocimene %: N/A
α-Pinene %: N/A
β-Pinene %: N/A
Genetic Information
View this strain on the Phylotree
Percent Heterozygosity: 1.16
Download VCF file: Here
Download FastQ Files: Read 1 Read 2
Download BAM file: BAM
Plant Type: Type I
Percent Heterozygosity: 1.16
Download VCF file: Here
Download FastQ Files: Read 1 Read 2
Download BAM file: BAM
Plant Type: Type I
CBCAS COVERAGE ![]() What does this visualization mean? |
Y-RATIO DISTRIBUTION ![]() What does this visualization mean? |
VARIANTS (THCAS, CBDAS, and CBCAS)
Gene | HGVS.c | HGVS.p | Annotation | Annotation Impact | Contig | Contig Pos | Ref/Alt | Var Freq | |
---|---|---|---|---|---|---|---|---|---|
THCAS | c.998C>G | p.Pro333Arg | missense variant | MODERATE | contig741 | 4416830 | G/C | NGS:0.182 C90:0.000 | 0.182 |
THCAS | c.749C>A | p.Ala250Asp | missense variant | MODERATE | contig741 | 4417079 | G/T | NGS:0.127 C90:0.632 | 0.127 |
NEAREST GENETIC RELATIVES TO Rugburn OG:
# | Relative | Genetic Distance |
---|---|---|
1 | RSP11241-501st OG | 2.08 | 2 | RSP10837-Skywalker OG | 2.24 | 3 | RSP11072-SFVxTK | 2.25 | 4 | RSP11190-Red Eye OG | 2.41 | 5 | RSP11104-RKM-2018-013 | 3.29 | 6 | RSP11103-RKM-2018-012 | 3.65 | 7 | RSP11265-Pure Power Plant | 4.33 | 8 | RSP11118-RKM-2018-026 | 4.38 | 9 | RSP11093-RKM-2018-002 | 5.05 | 10 | RSP11266-Abacus | 5.23 | 11 | RSP11352-Star Dawg | 5.25 | 12 | RSP11099-RKM-2018-008 | 5.3 | 13 | RSP11231-Gorilla Cookies | 5.45 | 14 | RSP11126-RKM-2018-034 | 5.51 | 15 | RSP11185-Chem 91 | 5.59 | 16 | RSP11167-Casco Kush | 5.59 | 17 | RSP11073-Pie Hoe | 5.61 | 18 | RSP11124-RKM-2018-032 | 5.72 | 19 | RSP11109-RKM-2018-017 | 5.72 | 20 | RSP11341-Garlic | 5.73 |
NEAREST GENETIC RELATIVES TO BASE TREE:
# | Relative | Genetic Distance |
---|---|---|
1 | RSP10837-Skywalker OG | 2.33 | 2 | RSP11118-RKM-2018-026 | 4.56 | 3 | RSP11093-RKM-2018-002 | 4.99 | 4 | RSP11126-RKM-2018-034 | 5.64 | 5 | RSP11124-RKM-2018-032 | 5.79 | 6 | RSP11073-Pie Hoe | 5.8 | 7 | RSP10988-The Gift | 5.88 | 8 | RSP11096-RKM-2018-005 | 6.23 | 9 | RSP11125-RKM-2018-033 | 6.44 | 10 | RSP11050-Hermaphrodite ResearchSample2 | 6.58 | 11 | RSP11112-RKM-2018-020 | 7.14 | 12 | RSP10684-Blueberry Cheesecake | 7.17 | 13 | RSP11128-Kush Hemp E1 | 7.8 | 14 | RSP11049-Hermaphrodite Research Sample1 | 7.83 | 15 | RSP10997-Kimbo Slice | 7.85 | 16 | RSP11100-RKM-2018-009 | 8.15 | 17 | RSP10680-Blueberry Cheesecake | 8.19 | 18 | RSP11000-Liberty Haze | 8.28 | 19 | RSP11014-Durban Poison | 8.33 | 20 | RSP11048-Gold Cracker | 8.34 |
MOST GENETICALLY DISTANT STRAINS FROM Rugburn OG:
# | Strain | Genetic Distance |
---|---|---|
1 | RSP11323-Cherry Blossom | 15.07 | 2 | RSP11268-Unknown- Cherry Wine - 001 | 15.03 | 3 | RSP11318-Cherry Blossom | 14.84 | 4 | RSP11301-Cherry Blossom | 14.59 | 5 | RSP11300-Cherry Blossom | 14.15 | 6 | RSP11269-Unknown- Cherry Wine - 002 | 14.07 | 7 | RSP11270-Unknown- Cherry Wine - 003 | 13.95 | 8 | RSP11312-Cherry Blossom | 13.86 | 9 | RSP11325-Cherry Blossom | 13.86 | 10 | RSP11315-Cherry Blossom | 13.8 | 11 | RSP11148-Wife | 13.64 | 12 | RSP11328-Cherry Blossom | 13.61 | 13 | RSP11306-Cherry Blossom | 13.58 | 14 | RSP10938-Avidekel | 13.35 | 15 | RSP11309-Cherry Blossom | 13.33 | 16 | RSP11331-Cherry Blossom | 13.33 | 17 | RSP11321-Cherry Blossom | 13.32 | 18 | RSP11298-Cherry Blossom | 13.3 | 19 | RSP11302-Cherry Blossom | 13.28 | 20 | RSP11329-Cherry Blossom | 13.23 |
NEAREST GENETIC RELATIVES IN PHYLOS DATASET:
Phylos Strain | Number of Overlapping SNPs | Concordance |
---|---|---|
SRR8346494 | 65 | 55 |
NEAREST GENETIC RELATIVES IN LYNCH DATASET:
Nearest Lynch Strain | Number of Overlapping SNPs | Concordance |
---|---|---|
SRR3495239 | 7 | 7 |
Blockchain Registration Information:
Transaction ID: b2accf8d08fb5937fceab9716edce9513768ea444628dab26aafce6292dadb01
Stamping Certificate: PDF
SHASUM Hash: 65b10d71e43a43d7ad0bd569c13488f30d4641f77c66691377fd65707808057b
Stamping Certificate: PDF
SHASUM Hash: 65b10d71e43a43d7ad0bd569c13488f30d4641f77c66691377fd65707808057b