C Temple

RSP11643
StrainSEEK Cannabis Certification Report

Accession Date:

September 18, 2020

Summary

C Temple (RSP11643/Happy Valley) is a genetic Type I plant and its genetics appear rare. The sample's closest relative in the database is Thank You Jerry (RSP11459/Happy Valley) and it is a potential sibling. The heterozygosity rate is 1.13% which is average (58.2 percentile).

General Information

Strain: C Temple
RSP ID: RSP11643
Grower: Happy Valley
Accession Date: September 18, 2020
Gender: Female
Strain Seek Version: V2


What does this visualization mean?

Chemical Information*


Cannabinoid and Terpenoid information provided by our Partner Labs.

CANNABINOIDS

THC + THCA %: N/A
CBD + CBDA %: N/A
THCV + THCVA %: N/A
CBC + CBCA %: N/A
CBG + CBGA %: N/A
CBN + CBNA %: N/A

TERPENOIDS

  • α-Bisabolol %: N/A
    Borneol %: N/A
    Camphene %: N/A
    Carene %: N/A
    Caryophyllene oxide %: N/A
    β-Carophyllene %: N/A
    Fenchol %: N/A
    Geraniol %: N/A
    α-Humulene %: N/A
    Limonene %: N/A
    Linalool %: N/A
  • Myrcene %: N/A
    α-Phellandrene %: N/A
    Terpinolene %: N/A
    α-Terpineol %: N/A
    α-Terpinene %: N/A
    γ-Terpinene %: N/A
    Total Nerolidol %: N/A
    Total Ocimene %: N/A
    α-Pinene %: N/A
    β-Pinene %: N/A

Genetic Information

View this strain on the Phylotree
Percent Heterozygosity: 1.13
Download VCF file: Here
Download FastQ Files: Read 1 Read 2
Download BAM file: BAM index
Download Annotated Variants: ANNOTATED VCF index
Plant Type: Type I

Bt/Bd ALLELE COVERAGE

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CBCAS COVERAGE


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Y-RATIO DISTRIBUTION


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VARIANTS (THCAS, CBDAS, and CBCAS)

Gene HGVS.c HGVS.p Annotation Annotation Impact Contig Contig Pos Ref/Alt Var Freq



VARIANTS (SELECT GENES OF INTEREST)

Gene HGVS.c HGVS.p Annotation Annotation Impact Contig Contig Pos Ref/Alt Var Freq
PKSG-2a

UNIPROT

c.67T>Ap.Phe23Ilemissense variantMODERATEcontig7001945567

IGV:Start|Jump

A/T

NGS:0.825

C90:0.904

0.825
PKSG-2a

UNIPROT

c.31A>Tp.Thr11Sermissense variantMODERATEcontig7001945603

IGV:Start|Jump

T/A

NGS:0.763

C90:0.876

0.763
PKSG-2b

UNIPROT

c.1152T>Ap.Asn384Lysmissense variantMODERATEcontig7001950486

IGV:Start|Jump

A/T

NGS:0.715

C90:0.895

0.715
PKSG-2b

UNIPROT

c.1132C>Gp.Leu378Valmissense variantMODERATEcontig7001950506

IGV:Start|Jump

G/C

NGS:0.717

C90:0.000

0.717
PKSG-2b

UNIPROT

c.1117A>Gp.Ile373Valmissense variantMODERATEcontig7001950521

IGV:Start|Jump

T/C

NGS:0.807

C90:0.981

0.807
PKSG-2b

UNIPROT

c.31A>Tp.Thr11Sermissense variantMODERATEcontig7001951851

IGV:Start|Jump

T/A

NGS:0.844

C90:0.880

0.844
PKSG-4b

UNIPROT

c.496A>Gp.Lys166Glumissense variantMODERATEcontig7002721177

IGV:Start|Jump

T/C

NGS:0.651

C90:0.684

0.651
PKSG-4b

UNIPROT

c.489delTp.Phe163fsframeshift variantHIGHcontig7002721183

IGV:Start|Jump

CA/C

NGS:0.792

C90:0.761

0.792
PKSG-4b

UNIPROT

c.485A>Gp.Lys162Argmissense variantMODERATEcontig7002721188

IGV:Start|Jump

T/C

NGS:0.643

C90:0.301

0.643
PKSG-4b

UNIPROT

c.431T>Gp.Val144Glymissense variantMODERATEcontig7002721242

IGV:Start|Jump

A/C

NGS:0.575

C90:0.679

0.575
PKSG-4b

UNIPROT

c.419A>Gp.Asp140Glymissense variantMODERATEcontig7002721254

IGV:Start|Jump

T/C

NGS:0.430

C90:0.440

0.43
aPT4

UNIPROT

c.235_236delGTp.Val79fsframeshift variantHIGHcontig1212829030

IGV:Start|Jump

ATG/A

NGS:0.417

C90:0.000

0.417
aPT4

UNIPROT

c.238delTp.Ser80fsframeshift variantHIGHcontig1212829034

IGV:Start|Jump

AT/A

NGS:0.421

C90:0.000

0.421
aPT4

UNIPROT

c.302A>Gp.Asn101Sermissense variantMODERATEcontig1212829099

IGV:Start|Jump

A/G

NGS:0.349

C90:0.000

0.349
aPT4

UNIPROT

c.1168T>Cp.Tyr390Hismissense variantMODERATEcontig1212833503

IGV:Start|Jump

T/C

NGS:0.546

C90:0.000

0.546
aPT1

UNIPROT

c.629C>Tp.Thr210Ilemissense variantMODERATEcontig1212840237

IGV:Start|Jump

C/T

NGS:0.561

C90:0.598

0.561
HDS-2

UNIPROT

c.82_93delGTAACCGGAACTp.Val28_Thr31delconservative inframe deletionMODERATEcontig951989748

IGV:Start|Jump

CGTAACCGGAACT/C

NGS:0.805

C90:0.000

0.805
HDS-2

UNIPROT

c.127T>Gp.Ser43Alamissense variantMODERATEcontig951989794

IGV:Start|Jump

T/G

NGS:0.721

C90:0.000

0.721


NEAREST GENETIC RELATIVES TO C Temple:
# Relative Genetic Distance
1 RSP11459-Thank You Jerry 5.45
2 RSP11366-Electra 6.28
3 RSP11126-RKM-2018-034 6.33
4 RSP11377-Rest 6.39
5 RSP10684-Blueberry Cheesecake 6.41
6 RSP11184-Domnesia 6.5
7 RSP11461-GG 4 6.67
8 RSP11243-Doug's Varin 6.73
9 RSP11109-RKM-2018-017 6.86
10 RSP11124-RKM-2018-032 6.88
11 RSP11113-RKM-2018-021 6.94
12 RSP11189-Tahoe OG 6.95
13 RSP11378-Lift 7.02
14 RSP11362-NSPM1 7.13
15 RSP11444-CBG- 40 7.14
16 RSP11364-Suver Haze 7.18
17 RSP11466-Trump x Trump 7.26
18 RSP11191-Super Sour Diesel 7.33
19 RSP10763-Serious Happiness 7.35
20 RSP11265-Pure Power Plant 7.46
NEAREST GENETIC RELATIVES TO BASE TREE:
# Relative Genetic Distance
1 RSP11126-RKM-2018-034 6.33
2 RSP11124-RKM-2018-032 6.99
3 RSP10684-Blueberry Cheesecake 7.12
4 RSP10988-The Gift 8.48
5 RSP11049-Hermaphrodite Research Sample1 8.51
6 RSP10837-Skywalker OG 8.6
7 RSP10680-Blueberry Cheesecake 8.61
8 RSP11118-RKM-2018-026 8.63
9 RSP11125-RKM-2018-033 8.74
10 RSP11112-RKM-2018-020 8.84
11 RSP11000-Liberty Haze 8.84
12 RSP11100-RKM-2018-009 8.85
13 RSP11014-Durban Poison 8.93
14 RSP11132-Cbot-2019-004 8.98
15 RSP11093-RKM-2018-002 8.98
16 RSP11110-RKM-2018-018 9.04
17 RSP10672-Blueberry Cheesecake 9.09
18 RSP10105-QUEEN JESUS 9.13
19 RSP11096-RKM-2018-005 9.19
20 RSP11073-Pie Hoe 9.19
NEAREST GENETIC RELATIVES IN PHYLOS DATASET:
Phylos Strain Number of Overlapping SNPs Concordance
SRR8349338 85 60

Blockchain Registration Information:

Transaction ID: 5ef2f73c71d308a7b31a727c5e2ec9217642392fcbd7140942c2f2cf60271ac7
Stamping Certificate: PDF
SHASUM Hash: b9b70a9cdc8853ac8f6a05513ce9440c7731c2c73f95e7448f02b15ded823343