General Information
Chemical Information*
Cannabinoid and Terpenoid information provided by our Partner Labs.
CANNABINOIDS
THC + THCA %: N/A
CBD + CBDA %: N/A
THCV + THCVA %: N/A
CBC + CBCA %: N/A
CBG + CBGA %: N/A
CBN + CBNA %: N/A
TERPENOIDS
- α-Bisabolol %: N/A
Borneol %: N/A
Camphene %: N/A
Carene %: N/A
Caryophyllene oxide %: N/A
β-Carophyllene %: N/A
Fenchol %: N/A
Geraniol %: N/A
α-Humulene %: N/A
Limonene %: N/A
Linalool %: N/A
-
Myrcene %: N/A
α-Phellandrene %: N/A
Terpinolene %: N/A
α-Terpineol %: N/A
α-Terpinene %: N/A
γ-Terpinene %: N/A
Total Nerolidol %: N/A
Total Ocimene %: N/A
α-Pinene %: N/A
β-Pinene %: N/A
Genetic Information
View this strain on the Phylotree
Download VCF file: Here
Download Annotated Variants: ANNOTATED VCF index
Plant Type: Type I
Download VCF file: Here
Download Annotated Variants: ANNOTATED VCF index
Plant Type: Type I
Bt/Bd ALLELE DETECTION ? CBDAS LOG-R RATIO ![]() What does this visualization mean? |
THCAS LOG-R RATIO ![]() What does this visualization mean? |
CBCAS LOG-R RATIO ![]() What does this visualization mean? |
PLANT SEX LOG-R RATIO ![]() What does this visualization mean? |
SUMMARY OF DELETIONS (THCAS, CBDAS, and CBCAS) AND PLANT SEX
Gene/Plant Sex | Correlation | Call |
---|---|---|
THCAS | 0.35 | INTACT |
CBDAS | 0.99 | DELETED |
CBCAS | 0.37 | INTACT | Plant Sex | 0.91 | Female |
VARIANTS (THCAS, CBDAS, and CBCAS)
Gene | HGVS.c | HGVS.p | Annotation | Annotation Impact | Contig | Contig Pos | Ref/Alt | Var Freq | |
---|---|---|---|---|---|---|---|---|---|
THCAS | c.424G>A | p.Val142Ile | missense variant | MODERATE | contig741 | 4417404 | C/T | NGS:0.000 C90:0.761 | |
THCAS | c.385G>A | p.Val129Ile | missense variant | MODERATE | contig741 | 4417443 | C/T | NGS:0.000 C90:0.947 | |
THCAS | c.355A>T | p.Met119Leu | missense variant | MODERATE | contig741 | 4417473 | T/A | NGS:0.000 C90:0.962 | |
THCAS | c.187A>C | p.Ile63Leu | missense variant | MODERATE | contig741 | 4417641 | T/G | NGS:0.059 C90:0.679 | 0.059 |
NEAREST GENETIC RELATIVES TO #4 Gina:
# | Relative | Genetic Distance |
---|---|---|
1 | RSP11650-Girl Scout Cookies | 1.74 | 2 | RSP11651-Girl Scout Cookies | 1.87 | 3 | RSP11649-Girl Scout Cookies | 1.97 | 4 | RSP11653-Girl Scout Cookies | 3.35 | 5 | RSP11579-JL Cross 78 | 3.61 | 6 | RSP11645-Unknown | 3.68 | 7 | RSP11459-Thank You Jerry | 3.78 | 8 | RSP11464-Wedding Cake x MAC | 3.81 | 9 | RSP11565-JL Cross 64 | 3.88 | 10 | RSP11539-JL Cross 38 | 3.9 | 11 | RSP11463-Deadhead OG | 3.95 | 12 | RSP11535-JL Cross 34 | 3.97 | 13 | RSP11181-Herijuana | 4.02 | 14 | RSP11578-JL Cross 77 | 4.06 | 15 | RSP11171-Alaska USA | 4.06 | 16 | RSP11541-JL Cross 40 | 4.1 | 17 | RSP11609-TI-9 | 4.11 | 18 | RSP11581-JL Cross 80 | 4.13 | 19 | RSP11655-Unknown | 4.13 | 20 | RSP11646-Pineapple Haze | 4.14 |
MOST GENETICALLY DISTANT STRAINS FROM #4 Gina:
# | Strain | Genetic Distance |
---|---|---|
1 | RSP11205-Feral | 7.4 | 2 | RSP11208-CS | 7.31 | 3 | RSP11210-Tiborszallasie | 7.18 | 4 | RSP11203-Fedora 17 | 7.15 | 5 | RSP11206-Feral | 7.08 | 6 | RSP11204-Carmagnola USO 31 | 6.97 | 7 | RSP11207-Carmaleonte | 6.92 | 8 | RSP11212-80E | 6.71 | 9 | RSP11209-Eletta Campana | 6.66 | 10 | RSP11213-80E | 6.58 | 11 | RSP11211-80E | 6.52 | 12 | RSP11394-Chematonic Cannatonic x Chemdawg | 6.3 | 13 | RSP11176-Arcata Trainwreck | 6.28 | 14 | RSP11268-Unknown- Cherry Wine - 001 | 6.13 | 15 | RSP11270-Unknown- Cherry Wine - 003 | 6.09 | 16 | RSP11269-Unknown- Cherry Wine - 002 | 6.05 | 17 | RSP11271-Unknown- Cherry Wine - 004 | 6.03 | 18 | RSP11603-Carmagnola garden | 5.88 | 19 | RSP11534-JL Cross 33 | 5.86 | 20 | RSP11272-Unknown- Cherry Wine - 005 | 5.79 |
NEAREST GENETIC RELATIVES IN PHYLOS DATASET:
Phylos Strain | Number of Overlapping SNPs | Concordance |
---|---|---|
SRR8349280 | 85 | 59 |
Blockchain Registration Information:
Transaction ID: fb8aa3a59dafc3ba15ffaefb04dc436cd9832348cc0cd48a21c7cd5a536f2b2d
Stamping Certificate: PDF
SHASUM Hash: 8461b42f56013e26b3f6e38758963ee133001d91bc871bd39089478abfefcc16
Stamping Certificate: PDF
SHASUM Hash: 8461b42f56013e26b3f6e38758963ee133001d91bc871bd39089478abfefcc16