Dog Patch

RSP11725
StrainSEEK Cannabis Certification Report

Accession Date:

December 10, 2020

Summary

Dog Patch (RSP11725/Happy Valley Ventures) is a genetic Type I plant and its genetics appear rare. The sample's closest relative in the database is Super Sour Diesel (RSP11191/Salmon Creek, CA) and it is a potential sibling. The heterozygosity rate is 0.94% which is average (34.3 percentile).

General Information

Strain: Dog Patch
RSP ID: RSP11725
Grower: Happy Valley Ventures
Accession Date: December 10, 2020
Gender: Female
Strain Seek Version: V2


What does this visualization mean?

Chemical Information*


Cannabinoid and Terpenoid information provided by our Partner Labs.

CANNABINOIDS

THC + THCA %: N/A
CBD + CBDA %: N/A
THCV + THCVA %: N/A
CBC + CBCA %: N/A
CBG + CBGA %: N/A
CBN + CBNA %: N/A

TERPENOIDS

  • α-Bisabolol %: N/A
    Borneol %: N/A
    Camphene %: N/A
    Carene %: N/A
    Caryophyllene oxide %: N/A
    β-Carophyllene %: N/A
    Fenchol %: N/A
    Geraniol %: N/A
    α-Humulene %: N/A
    Limonene %: N/A
    Linalool %: N/A
  • Myrcene %: N/A
    α-Phellandrene %: N/A
    Terpinolene %: N/A
    α-Terpineol %: N/A
    α-Terpinene %: N/A
    γ-Terpinene %: N/A
    Total Nerolidol %: N/A
    Total Ocimene %: N/A
    α-Pinene %: N/A
    β-Pinene %: N/A

Genetic Information

View this strain on the Phylotree
Percent Heterozygosity: 0.94
Download VCF file: Here
Download FastQ Files: Read 1 Read 2
Plant Type: Type I

Bt/Bd ALLELE COVERAGE

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CBCAS COVERAGE


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Y-RATIO DISTRIBUTION


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VARIANTS (THCAS, CBDAS, and CBCAS)

Gene HGVS.c HGVS.p Annotation Annotation Impact Contig Contig Pos Ref/Alt Var Freq



VARIANTS (SELECT GENES OF INTEREST)

Gene HGVS.c HGVS.p Annotation Annotation Impact Contig Contig Pos Ref/Alt Var Freq
PKSG-4a

UNIPROT

c.37C>Gp.Gln13Glumissense variantMODERATEcontig7001936734C/G

NGS:0.031

C90:0.000

0.031
PKSG-4a

UNIPROT

c.617A>Gp.Tyr206Cysmissense variantMODERATEcontig7001938028A/G

NGS:0.075

C90:0.000

0.075
PKSG-4a

UNIPROT

c.626_628delATAp.Asn209deldisruptive inframe deletionMODERATEcontig7001938032CAAT/C

NGS:0.075

C90:0.000

0.075
PKSG-4a

UNIPROT

c.1191_1193delTTAp.Tyr398deldisruptive inframe deletionMODERATEcontig7001938600AATT/A

NGS:0.167

C90:0.000

0.167
PKSG-2a

UNIPROT

c.1117A>Gp.Ile373Valmissense variantMODERATEcontig7001944273T/C

NGS:0.101

C90:0.967

0.101
PKSG-2a

UNIPROT

c.67T>Ap.Phe23Ilemissense variantMODERATEcontig7001945567A/T

NGS:0.825

C90:0.904

0.825
PKSG-2a

UNIPROT

c.31A>Tp.Thr11Sermissense variantMODERATEcontig7001945603T/A

NGS:0.763

C90:0.876

0.763
PKSG-2b

UNIPROT

c.1117A>Gp.Ile373Valmissense variantMODERATEcontig7001950521T/C

NGS:0.807

C90:0.981

0.807
PKSG-2b

UNIPROT

c.995C>Tp.Ser332Phemissense variantMODERATEcontig7001950643G/A

NGS:0.042

C90:0.000

0.042
PKSG-4b

UNIPROT

c.496A>Gp.Lys166Glumissense variantMODERATEcontig7002721177T/C

NGS:0.651

C90:0.684

0.651
PKSG-4b

UNIPROT

c.489delTp.Phe163fsframeshift variantHIGHcontig7002721183CA/C

NGS:0.792

C90:0.761

0.792
PKSG-4b

UNIPROT

c.485A>Gp.Lys162Argmissense variantMODERATEcontig7002721188T/C

NGS:0.643

C90:0.301

0.643
PKSG-4b

UNIPROT

c.431T>Gp.Val144Glymissense variantMODERATEcontig7002721242A/C

NGS:0.575

C90:0.679

0.575
PKSG-4b

UNIPROT

c.419A>Gp.Asp140Glymissense variantMODERATEcontig7002721254T/C

NGS:0.430

C90:0.440

0.43
PKSG-4b

UNIPROT

c.352_355delACAGp.Thr118fsframeshift variantHIGHcontig7002721317CCTGT/C

NGS:0.529

C90:0.000

0.529
PKSG-4b

UNIPROT

c.323A>Gp.Glu108Glymissense variantMODERATEcontig7002721350T/C

NGS:0.469

C90:0.000

0.469
DXR-2

UNIPROT

c.1319T>Cp.Ile440Thrmissense variantMODERATEcontig380285250A/G

NGS:0.480

C90:0.000

0.48
DXR-2

UNIPROT

c.431C>Gp.Ala144Glymissense variantMODERATEcontig380287760G/C

NGS:0.182

C90:0.550

0.182
FAD2-2

UNIPROT

c.172G>Tp.Asp58Tyrmissense variantMODERATEcontig831803197C/A

NGS:0.070

C90:0.000

0.07
FAD2-2

UNIPROT

c.161T>Ap.Leu54Hismissense variantMODERATEcontig831803208A/T

NGS:0.156

C90:0.000

0.156
aPT4

UNIPROT

c.216A>Tp.Lys72Asnmissense variantMODERATEcontig1212828872A/T

NGS:0.075

C90:0.000

0.075
aPT1

UNIPROT

c.406A>Gp.Ile136Valmissense variantMODERATEcontig1212839605A/G

NGS:0.579

C90:0.761

0.579
HDS-2

UNIPROT

c.82_93delGTAACCGGAACTp.Val28_Thr31delconservative inframe deletionMODERATEcontig951989748CGTAACCGGAACT/C

NGS:0.805

C90:0.000

0.805
HDS-2

UNIPROT

c.127T>Gp.Ser43Alamissense variantMODERATEcontig951989794T/G

NGS:0.721

C90:0.000

0.721
HDS-1

UNIPROT

c.1378G>Ap.Val460Ilemissense variantMODERATEcontig1891886370C/T

NGS:0.167

C90:0.000

0.167
HDS-1

UNIPROT

c.-108+1_-108+2insGsplice donor variant&intron variantHIGHcontig1891889975A/AC

NGS:0.217

C90:0.000

0.217


NEAREST GENETIC RELATIVES TO Dog Patch:
# Relative Genetic Distance
1 RSP11191-Super Sour Diesel 3.63
2 RSP11343-Sour D 4.66
3 RSP10243-East Coast Sour Diesel 4.86
4 RSP11225-New York City Deisel 4.9
5 RSP11352-Star Dawg 5.6
6 RSP11093-RKM-2018-002 5.77
7 RSP11095-RKM-2018-004 6.2
8 RSP11096-RKM-2018-005 6.34
9 RSP11459-Thank You Jerry 6.36
10 RSP11504-JL Cross 3 6.56
11 RSP11643-C Temple 6.79
12 RSP11109-RKM-2018-017 6.8
13 RSP11113-RKM-2018-021 6.82
14 RSP11124-RKM-2018-032 6.82
15 RSP11354-Dominion Skunk 6.9
16 RSP11461-GG 4 6.91
17 RSP11627-Dave Alaska 7.06
18 RSP10763-Serious Happiness 7.1
19 RSP11241-501st OG 7.11
20 RSP11265-Pure Power Plant 7.26
NEAREST GENETIC RELATIVES TO BASE TREE:
# Relative Genetic Distance
1 RSP11093-RKM-2018-002 6.07
2 RSP11096-RKM-2018-005 6.25
3 RSP11124-RKM-2018-032 6.88
4 RSP10684-Blueberry Cheesecake 7.44
5 RSP11126-RKM-2018-034 7.79
6 RSP11014-Durban Poison 8.35
7 RSP11125-RKM-2018-033 8.48
8 RSP11049-Hermaphrodite Research Sample1 8.7
9 RSP10837-Skywalker OG 8.92
10 RSP11100-RKM-2018-009 9.04
11 RSP11048-Gold Cracker 9.16
12 RSP11000-Liberty Haze 9.23
13 RSP11111-RKM-2018-019 9.35
14 RSP11121-RKM-2018-029 9.42
15 RSP10672-Blueberry Cheesecake 9.53
16 RSP11112-RKM-2018-020 9.58
17 RSP10105-QUEEN JESUS 9.59
18 RSP10680-Blueberry Cheesecake 9.64
19 RSP11118-RKM-2018-026 9.75
20 RSP11094-RKM-2018-003 9.85
NEAREST GENETIC RELATIVES IN PHYLOS DATASET:
Phylos Strain Number of Overlapping SNPs Concordance
SRR8349005 74 56
NEAREST GENETIC RELATIVES IN LYNCH DATASET:
Nearest Lynch Strain Number of Overlapping SNPs Concordance
SRR3495272 14 11

Blockchain Registration Information:

Transaction ID: 19eef9e3e40bfe51d99c595a1b18ef7b725c71154d626b6dfaa2802a314459fa
Stamping Certificate: PDF
SHASUM Hash: 491c3ea9fe4332bb0ad3e44ba952ce0e4857226147d31121d5318147d5a09721