Black Jack

RSP10603
StrainSEEK Cannabis Certification Report

Accession Date:

January 31, 2017

General Information

Strain: Black Jack
Sample: F20161210-01-4
RSP ID: RSP10603
Grower: Gravitas
Accession Date: January 31, 2017
Gender: -
Strain Seek Version: V2


What does this visualization mean?

Chemical Information*


Cannabinoid and Terpenoid information provided by our Partner Labs.

CANNABINOIDS

THC + THCA %: N/A
CBD + CBDA %: N/A
THCV + THCVA %: N/A
CBC + CBCA %: N/A
CBG + CBGA %: N/A
CBN + CBNA %: N/A

TERPENOIDS

  • α-Bisabolol %: N/A
    Borneol %: N/A
    Camphene %: N/A
    Carene %: N/A
    Caryophyllene oxide %: N/A
    β-Carophyllene %: N/A
    Fenchol %: N/A
    Geraniol %: N/A
    α-Humulene %: N/A
    Limonene %: N/A
    Linalool %: N/A
  • Myrcene %: N/A
    α-Phellandrene %: N/A
    Terpinolene %: N/A
    α-Terpineol %: N/A
    α-Terpinene %: N/A
    γ-Terpinene %: N/A
    Total Nerolidol %: N/A
    Total Ocimene %: N/A
    α-Pinene %: N/A
    β-Pinene %: N/A

Genetic Information

View this strain on the Phylotree
Percent Heterozygosity: 1.61
Download VCF file: Here
Download FastQ Files: Read 1 Read 2
Download BAM file: BAM index
Download Annotated Variants: ANNOTATED VCF index
Plant Type: Type I

Bt/Bd ALLELE COVERAGE

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CBCAS COVERAGE


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Y-RATIO DISTRIBUTION


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VARIANTS (THCAS, CBDAS, and CBCAS)

Gene HGVS.c HGVS.p Annotation Annotation Impact Contig Contig Pos Ref/Alt Var Freq



VARIANTS (SELECT GENES OF INTEREST)

Gene HGVS.c HGVS.p Annotation Annotation Impact Contig Contig Pos Ref/Alt Var Freq
PKSG-2a

UNIPROT

c.67T>Ap.Phe23Ilemissense variantMODERATEcontig7001945567

IGV:Start|Jump

A/T

NGS:0.825

C90:0.904

0.825
PKSG-2a

UNIPROT

c.31A>Tp.Thr11Sermissense variantMODERATEcontig7001945603

IGV:Start|Jump

T/A

NGS:0.763

C90:0.876

0.763
PKSG-2b

UNIPROT

c.31A>Tp.Thr11Sermissense variantMODERATEcontig7001951851

IGV:Start|Jump

T/A

NGS:0.844

C90:0.880

0.844
PKSG-2b

UNIPROT

c.-2_1dupATAstart lost&conservative inframe insertionHIGHcontig7001951880

IGV:Start|Jump

A/ATAT

NGS:0.410

C90:0.000

0.41
PKSG-4b

UNIPROT

c.496A>Gp.Lys166Glumissense variantMODERATEcontig7002721177

IGV:Start|Jump

T/C

NGS:0.651

C90:0.684

0.651
aPT4

UNIPROT

c.775delTp.Tyr259fsframeshift variantHIGHcontig1212831380

IGV:Start|Jump

AT/A

NGS:0.224

C90:0.000

0.224
aPT1

UNIPROT

c.406A>Gp.Ile136Valmissense variantMODERATEcontig1212839605

IGV:Start|Jump

A/G

NGS:0.579

C90:0.761

0.579
aPT1

UNIPROT

c.629C>Tp.Thr210Ilemissense variantMODERATEcontig1212840237

IGV:Start|Jump

C/T

NGS:0.561

C90:0.598

0.561


NEAREST GENETIC RELATIVES TO Black Jack:
# Relative Genetic Distance
1 RSP11108-RKM-2018-016 0.12
2 RSP11117-RKM-2018-025 0.12
3 RSP11346-BLACK JACK 0.17
4 RSP11119-RKM-2018-027 1.17
5 RSP10996-Durban Poison 1 3.89
6 RSP11014-Durban Poison 3.89
7 RSP11013-Durban Poison 1 4.03
8 RSP11179-Saint Jack 4.1
9 RSP11041-Gold Cracker 4.12
10 RSP10998-Durban Poison 4.14
11 RSP11048-Gold Cracker 4.15
12 RSP10460-Cheese 4.59
13 RSP10763-Serious Happiness 4.7
14 RSP11243-Doug's Varin 4.74
15 RSP11011-Super Blue Dream 4.78
16 RSP11226-Durban Poison 4.93
17 RSP11007-Blue Dream 5.12
18 RSP11004-Blue Dream 5.18
19 RSP10995-Tangerine Haze 5.2
20 RSP10989-UP Sunrise 5.32
NEAREST GENETIC RELATIVES TO BASE TREE:
# Relative Genetic Distance
1 RSP11119-RKM-2018-027 1.15
2 RSP11014-Durban Poison 3.89
3 RSP11048-Gold Cracker 4.17
4 RSP10989-UP Sunrise 5.53
5 RSP11000-Liberty Haze 5.76
6 RSP11034-Italian Kiss 6.03
7 RSP10684-Blueberry Cheesecake 6.03
8 RSP11094-RKM-2018-003 6.05
9 RSP11112-RKM-2018-020 6.25
10 RSP11033-Blue Dream 6.3
11 RSP11123-RKM-2018-031 6.42
12 RSP11002-CST 6.43
13 RSP10991-Golden Goat 2 6.56
14 RSP11097-RKM-2018-006 6.56
15 RSP11115-RKM-2018-023 6.64
16 RSP11049-Hermaphrodite Research Sample1 6.92
17 RSP11110-RKM-2018-018 7.15
18 RSP11100-RKM-2018-009 7.25
19 RSP10755-Recon 7.32
20 RSP11132-Cbot-2019-004 7.42
NEAREST GENETIC RELATIVES IN PHYLOS DATASET:
Phylos Strain Number of Overlapping SNPs Concordance
SRR8349002 76 71
NEAREST GENETIC RELATIVES IN LYNCH DATASET:
Nearest Lynch Strain Number of Overlapping SNPs Concordance
SRR3495298 10 10

Blockchain Registration Information:

Transaction ID: fcfbfc7aa918246bd9fe26a44c7bed1f569a572d0d845fc3f31dd09247e5c1d9
Stamping Certificate: PDF
SHASUM Hash: 284f2810cf26cc4733ed01a9378b130578a04d022185d61e142d193ce8ef3664