Blueberry Cheesecake

RSP10672
StrainSEEK Cannabis Certification Report

Accession Date:

February 15, 2017

General Information

Strain: Blueberry Cheesecake
Sample: Blueberry Cheesecake #1 Mother _23JAN2017
RSP ID: RSP10672
Grower: NA
Accession Date: February 15, 2017
Gender: Female
Strain Seek Version: V2


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Chemical Information*


Cannabinoid and Terpenoid information provided by our Partner Labs.

CANNABINOIDS

THC + THCA %: N/A
CBD + CBDA %: N/A
THCV + THCVA %: N/A
CBC + CBCA %: N/A
CBG + CBGA %: N/A
CBN + CBNA %: N/A

TERPENOIDS

  • α-Bisabolol %: N/A
    Borneol %: N/A
    Camphene %: N/A
    Carene %: N/A
    Caryophyllene oxide %: N/A
    β-Carophyllene %: N/A
    Fenchol %: N/A
    Geraniol %: N/A
    α-Humulene %: N/A
    Limonene %: N/A
    Linalool %: N/A
  • Myrcene %: N/A
    α-Phellandrene %: N/A
    Terpinolene %: N/A
    α-Terpineol %: N/A
    α-Terpinene %: N/A
    γ-Terpinene %: N/A
    Total Nerolidol %: N/A
    Total Ocimene %: N/A
    α-Pinene %: N/A
    β-Pinene %: N/A

Genetic Information

View this strain on the Phylotree
Percent Heterozygosity: 1
Download VCF file: Here
Download FastQ Files: Read 1 Read 2
Download BAM file: BAM index
Download Annotated Variants: ANNOTATED VCF index
Plant Type: Type II

Bt/Bd ALLELE COVERAGE

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CBCAS COVERAGE


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Y-RATIO DISTRIBUTION


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VARIANTS (THCAS, CBDAS, and CBCAS)

Gene HGVS.c HGVS.p Annotation Annotation Impact Contig Contig Pos Ref/Alt Var Freq



VARIANTS (SELECT GENES OF INTEREST)

Gene HGVS.c HGVS.p Annotation Annotation Impact Contig Contig Pos Ref/Alt Var Freq
PKSG-2a

UNIPROT

c.67T>Ap.Phe23Ilemissense variantMODERATEcontig7001945567

IGV:Start|Jump

A/T

NGS:0.825

C90:0.904

0.825
PKSG-2b

UNIPROT

c.31A>Tp.Thr11Sermissense variantMODERATEcontig7001951851

IGV:Start|Jump

T/A

NGS:0.844

C90:0.880

0.844
PKSG-2b

UNIPROT

c.-2_1dupATAstart lost&conservative inframe insertionHIGHcontig7001951880

IGV:Start|Jump

A/ATAT

NGS:0.410

C90:0.000

0.41
PKSG-4b

UNIPROT

c.496A>Gp.Lys166Glumissense variantMODERATEcontig7002721177

IGV:Start|Jump

T/C

NGS:0.651

C90:0.684

0.651
PKSG-4b

UNIPROT

c.492G>Cp.Glu164Aspmissense variantMODERATEcontig7002721181

IGV:Start|Jump

C/G

NGS:0.048

C90:0.000

0.048
DXR-1

UNIPROT

c.139A>Gp.Arg47Glymissense variantMODERATEcontig380235296

IGV:Start|Jump

T/C

NGS:0.020

C90:0.000

0.02
HDS-2

UNIPROT

c.82_93delGTAACCGGAACTp.Val28_Thr31delconservative inframe deletionMODERATEcontig951989748

IGV:Start|Jump

CGTAACCGGAACT/C

NGS:0.805

C90:0.000

0.805


NEAREST GENETIC RELATIVES TO Blueberry Cheesecake:
# Relative Genetic Distance
1 RSP10671-Blueberry Cheesecake 0.05
2 RSP10670-Blueberry Cheesecake 0.07
3 RSP11076-JL 2 1.02
4 RSP11201-BlueBerry Cheesecake x JL Male 5.05
5 RSP10684-Blueberry Cheesecake 7.03
6 RSP11123-RKM-2018-031 7.11
7 RSP10763-Serious Happiness 7.33
8 RSP11004-Blue Dream 7.53
9 RSP10996-Durban Poison 1 7.66
10 RSP11339-Green Crack 7.74
11 RSP11002-CST 7.75
12 RSP10603-Black Jack 7.75
13 RSP11346-BLACK JACK 7.78
14 RSP11014-Durban Poison 7.8
15 RSP11013-Durban Poison 1 7.93
16 RSP11184-Domnesia 7.96
17 RSP11355-SHERBERT 7.99
18 RSP11349-CANNATONIC 8
19 RSP11153-JL 4th Gen 7 8.02
20 RSP10460-Cheese 8.05
NEAREST GENETIC RELATIVES TO BASE TREE:
# Relative Genetic Distance
1 RSP10684-Blueberry Cheesecake 7.29
2 RSP11123-RKM-2018-031 7.58
3 RSP11002-CST 8.14
4 RSP11014-Durban Poison 8.23
5 RSP10105-QUEEN JESUS 8.32
6 RSP11094-RKM-2018-003 8.5
7 RSP11000-Liberty Haze 8.57
8 RSP11121-RKM-2018-029 8.61
9 RSP11143-Cherry 8.67
10 RSP10989-UP Sunrise 8.72
11 RSP11119-RKM-2018-027 8.75
12 RSP11096-RKM-2018-005 8.84
13 RSP11111-RKM-2018-019 9
14 RSP11051-KYRG-11 9.1
15 RSP11129-Cbot-2019-001 9.1
16 RSP11112-RKM-2018-020 9.23
17 RSP11115-RKM-2018-023 9.31
18 RSP10659-Tisza 9.36
19 RSP10991-Golden Goat 2 9.45
20 RSP11048-Gold Cracker 9.48
NEAREST GENETIC RELATIVES IN PHYLOS DATASET:
Phylos Strain Number of Overlapping SNPs Concordance
SRR8347130 107 74
NEAREST GENETIC RELATIVES IN LYNCH DATASET:
Nearest Lynch Strain Number of Overlapping SNPs Concordance
SRR3495291 13 9

Blockchain Registration Information:

Transaction ID: 9f79a6a0a89da5360a01fb88736ece75c4fddb5e9fe0aa0534b8885ee905d057
Stamping Certificate: PDF
SHASUM Hash: 15600341991afa3a5ff82c49c58706b0badd0c661fa8f8fe6ffbca0f4fcc95c5