Italian Kiss

RSP11034
StrainSEEK Cannabis Certification Report

Accession Date:

November 20, 2017

General Information

Strain: Italian Kiss
Sample: Italian Kiss #1
RSP ID: RSP11034
Grower: Italian Grower
Accession Date: November 20, 2017
Gender: Female
Strain Seek Version: V2


What does this visualization mean?

Chemical Information*


Cannabinoid and Terpenoid information provided by our Partner Labs.

CANNABINOIDS

THC + THCA %: N/A
CBD + CBDA %: N/A
THCV + THCVA %: N/A
CBC + CBCA %: N/A
CBG + CBGA %: N/A
CBN + CBNA %: N/A

TERPENOIDS

  • α-Bisabolol %: N/A
    Borneol %: N/A
    Camphene %: N/A
    Carene %: N/A
    Caryophyllene oxide %: N/A
    β-Carophyllene %: N/A
    Fenchol %: N/A
    Geraniol %: N/A
    α-Humulene %: N/A
    Limonene %: N/A
    Linalool %: N/A
  • Myrcene %: N/A
    α-Phellandrene %: N/A
    Terpinolene %: N/A
    α-Terpineol %: N/A
    α-Terpinene %: N/A
    γ-Terpinene %: N/A
    Total Nerolidol %: N/A
    Total Ocimene %: N/A
    α-Pinene %: N/A
    β-Pinene %: N/A

Genetic Information

View this strain on the Phylotree
Percent Heterozygosity: 0.73
Download VCF file: Here
Download FastQ Files: Read 1 Read 2
Download BAM file: BAM index
Download Annotated Variants: ANNOTATED VCF index
Plant Type: Type I

Bt/Bd ALLELE COVERAGE

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CBCAS COVERAGE


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Y-RATIO DISTRIBUTION


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VARIANTS (THCAS, CBDAS, and CBCAS)

Gene HGVS.c HGVS.p Annotation Annotation Impact Contig Contig Pos Ref/Alt Var Freq
THCASc.187A>Cp.Ile63Leumissense variantMODERATEcontig7414417641

IGV:Start|Jump

T/G

NGS:0.059

C90:0.679

0.059



VARIANTS (SELECT GENES OF INTEREST)

Gene HGVS.c HGVS.p Annotation Annotation Impact Contig Contig Pos Ref/Alt Var Freq
PKSG-2a

UNIPROT

c.67T>Ap.Phe23Ilemissense variantMODERATEcontig7001945567

IGV:Start|Jump

A/T

NGS:0.825

C90:0.904

0.825
PKSG-2a

UNIPROT

c.31A>Tp.Thr11Sermissense variantMODERATEcontig7001945603

IGV:Start|Jump

T/A

NGS:0.763

C90:0.876

0.763
PKSG-2b

UNIPROT

c.1152T>Ap.Asn384Lysmissense variantMODERATEcontig7001950486

IGV:Start|Jump

A/T

NGS:0.715

C90:0.895

0.715
PKSG-2b

UNIPROT

c.1132C>Gp.Leu378Valmissense variantMODERATEcontig7001950506

IGV:Start|Jump

G/C

NGS:0.717

C90:0.000

0.717
PKSG-2b

UNIPROT

c.1117A>Gp.Ile373Valmissense variantMODERATEcontig7001950521

IGV:Start|Jump

T/C

NGS:0.807

C90:0.981

0.807
PKSG-2b

UNIPROT

c.948T>Gp.Asp316Glumissense variantMODERATEcontig7001950690

IGV:Start|Jump

A/C

NGS:0.456

C90:0.000

0.456
PKSG-2b

UNIPROT

c.945T>Gp.Ser315Argmissense variantMODERATEcontig7001950693

IGV:Start|Jump

A/C

NGS:0.454

C90:0.000

0.454
PKSG-2b

UNIPROT

c.944G>Ap.Ser315Asnmissense variantMODERATEcontig7001950694

IGV:Start|Jump

C/T

NGS:0.445

C90:0.000

0.445
PKSG-2b

UNIPROT

c.934C>Gp.His312Aspmissense variantMODERATEcontig7001950704

IGV:Start|Jump

G/C

NGS:0.410

C90:0.000

0.41
PKSG-2b

UNIPROT

c.31A>Tp.Thr11Sermissense variantMODERATEcontig7001951851

IGV:Start|Jump

T/A

NGS:0.844

C90:0.880

0.844
PKSG-2b

UNIPROT

c.-2_1dupATAstart lost&conservative inframe insertionHIGHcontig7001951880

IGV:Start|Jump

A/ATAT

NGS:0.410

C90:0.000

0.41
PKSG-4b

UNIPROT

c.496A>Gp.Lys166Glumissense variantMODERATEcontig7002721177

IGV:Start|Jump

T/C

NGS:0.651

C90:0.684

0.651
PKSG-4b

UNIPROT

c.489delTp.Phe163fsframeshift variantHIGHcontig7002721183

IGV:Start|Jump

CA/C

NGS:0.792

C90:0.761

0.792
PKSG-4b

UNIPROT

c.485A>Gp.Lys162Argmissense variantMODERATEcontig7002721188

IGV:Start|Jump

T/C

NGS:0.643

C90:0.301

0.643
PKSG-4b

UNIPROT

c.431T>Gp.Val144Glymissense variantMODERATEcontig7002721242

IGV:Start|Jump

A/C

NGS:0.575

C90:0.679

0.575
PKSG-4b

UNIPROT

c.419A>Gp.Asp140Glymissense variantMODERATEcontig7002721254

IGV:Start|Jump

T/C

NGS:0.430

C90:0.440

0.43
aPT4

UNIPROT

c.626A>Gp.Asn209Sermissense variantMODERATEcontig1212830904

IGV:Start|Jump

A/G

NGS:0.035

C90:0.000

0.035
aPT4

UNIPROT

c.1168T>Cp.Tyr390Hismissense variantMODERATEcontig1212833503

IGV:Start|Jump

T/C

NGS:0.546

C90:0.000

0.546
aPT1

UNIPROT

c.160A>Cp.Thr54Promissense variantMODERATEcontig1212835867

IGV:Start|Jump

A/C

NGS:0.086

C90:0.048

0.086
aPT1

UNIPROT

c.406A>Gp.Ile136Valmissense variantMODERATEcontig1212839605

IGV:Start|Jump

A/G

NGS:0.579

C90:0.761

0.579
aPT1

UNIPROT

c.670T>Ap.Ser224Thrmissense variantMODERATEcontig1212840278

IGV:Start|Jump

T/A

NGS:0.077

C90:0.000

0.077
aPT1

UNIPROT

c.727G>Tp.Glu243*stop gainedHIGHcontig1212841362

IGV:Start|Jump

G/T

NGS:0.127

C90:0.100

0.127
aPT1

UNIPROT

c.864C>Gp.Asn288Lysmissense variantMODERATEcontig1212842407

IGV:Start|Jump

C/G

NGS:0.075

C90:0.062

0.075
HDS-2

UNIPROT

c.82_93delGTAACCGGAACTp.Val28_Thr31delconservative inframe deletionMODERATEcontig951989748

IGV:Start|Jump

CGTAACCGGAACT/C

NGS:0.805

C90:0.000

0.805


NEAREST GENETIC RELATIVES TO Italian Kiss:
# Relative Genetic Distance
1 RSP10990-Italian Kiss 0.1
2 RSP11102-RKM-2018-011 4.63
3 RSP10989-UP Sunrise 5.06
4 RSP10995-Tangerine Haze 5.38
5 RSP11004-Blue Dream 5.42
6 RSP11017-Blue Dream 5.44
7 RSP11007-Blue Dream 5.53
8 RSP11011-Super Blue Dream 5.59
9 RSP10940-OR 5.62
10 RSP11342-Blue Dream 5.62
11 RSP11010-Blue Dream 5.63
12 RSP11009-Blue Dream 5.65
13 RSP11006-Blue Dream 5.65
14 RSP11003-Snoops Dream 5.67
15 RSP10460-Cheese 5.68
16 RSP11094-RKM-2018-003 5.72
17 RSP11033-Blue Dream 5.79
18 RSP11005-Blue Dream 5.8
19 RSP11032-Blue Dream 5.82
20 RSP10603-Black Jack 5.82
NEAREST GENETIC RELATIVES TO BASE TREE:
# Relative Genetic Distance
1 RSP10989-UP Sunrise 5.47
2 RSP11094-RKM-2018-003 5.92
3 RSP11033-Blue Dream 5.96
4 RSP11119-RKM-2018-027 6.53
5 RSP11100-RKM-2018-009 6.64
6 RSP11097-RKM-2018-006 6.73
7 RSP11049-Hermaphrodite Research Sample1 6.78
8 RSP11112-RKM-2018-020 6.86
9 RSP11048-Gold Cracker 6.87
10 RSP11002-CST 6.97
11 RSP11110-RKM-2018-018 7.45
12 RSP11120-RKM-2018-028 7.56
13 RSP11134-Cbot-2019-006 7.6
14 RSP11115-RKM-2018-023 7.64
15 RSP10991-Golden Goat 2 7.66
16 RSP11014-Durban Poison 7.87
17 RSP10684-Blueberry Cheesecake 7.9
18 RSP11050-Hermaphrodite ResearchSample2 7.98
19 RSP10755-Recon 8.02
20 RSP11000-Liberty Haze 8.05
NEAREST GENETIC RELATIVES IN PHYLOS DATASET:
Phylos Strain Number of Overlapping SNPs Concordance
SRR4448527 120 83

Blockchain Registration Information:

Transaction ID: 8d5055fd6895af7b492b27daa4410a9db2ff0549759c8c1438ab5da7e4b372b0
Stamping Certificate: PDF
SHASUM Hash: e3f7cdaa9cb00f91416271deaa7c12db7668c004bff6bfe93cf9a2ed42403003