Pie Hoe

RSP11073
StrainSEEK Cannabis Certification Report

Accession Date:

May 15, 2018

General Information

Strain: Pie Hoe
RSP ID: RSP11073
Grower: Jungle Boys (kyle)
Accession Date: May 15, 2018
Gender: -
Strain Seek Version: V2


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Chemical Information*


Cannabinoid and Terpenoid information provided by our Partner Labs.

CANNABINOIDS

THC + THCA %: N/A
CBD + CBDA %: N/A
THCV + THCVA %: N/A
CBC + CBCA %: N/A
CBG + CBGA %: N/A
CBN + CBNA %: N/A

TERPENOIDS

  • α-Bisabolol %: N/A
    Borneol %: N/A
    Camphene %: N/A
    Carene %: N/A
    Caryophyllene oxide %: N/A
    β-Carophyllene %: N/A
    Fenchol %: N/A
    Geraniol %: N/A
    α-Humulene %: N/A
    Limonene %: N/A
    Linalool %: N/A
  • Myrcene %: N/A
    α-Phellandrene %: N/A
    Terpinolene %: N/A
    α-Terpineol %: N/A
    α-Terpinene %: N/A
    γ-Terpinene %: N/A
    Total Nerolidol %: N/A
    Total Ocimene %: N/A
    α-Pinene %: N/A
    β-Pinene %: N/A

Genetic Information

View this strain on the Phylotree
Percent Heterozygosity: 0.89
Download VCF file: Here
Download FastQ Files: Read 1 Read 2
Download BAM file: BAM index
Download Annotated Variants: ANNOTATED VCF index
Plant Type: Type I

Bt/Bd ALLELE COVERAGE

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CBCAS COVERAGE


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Y-RATIO DISTRIBUTION


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VARIANTS (THCAS, CBDAS, and CBCAS)

Gene HGVS.c HGVS.p Annotation Annotation Impact Contig Contig Pos Ref/Alt Var Freq



VARIANTS (SELECT GENES OF INTEREST)

Gene HGVS.c HGVS.p Annotation Annotation Impact Contig Contig Pos Ref/Alt Var Freq
PKSG-2a

UNIPROT

c.67T>Ap.Phe23Ilemissense variantMODERATEcontig7001945567

IGV:Start|Jump

A/T

NGS:0.825

C90:0.904

0.825
PKSG-2a

UNIPROT

c.31A>Tp.Thr11Sermissense variantMODERATEcontig7001945603

IGV:Start|Jump

T/A

NGS:0.763

C90:0.876

0.763
PKSG-2b

UNIPROT

c.1132C>Gp.Leu378Valmissense variantMODERATEcontig7001950506

IGV:Start|Jump

G/C

NGS:0.717

C90:0.000

0.717
PKSG-2b

UNIPROT

c.1117A>Gp.Ile373Valmissense variantMODERATEcontig7001950521

IGV:Start|Jump

T/C

NGS:0.807

C90:0.981

0.807
PKSG-2b

UNIPROT

c.31A>Tp.Thr11Sermissense variantMODERATEcontig7001951851

IGV:Start|Jump

T/A

NGS:0.844

C90:0.880

0.844
aPT4

UNIPROT

c.302A>Gp.Asn101Sermissense variantMODERATEcontig1212829099

IGV:Start|Jump

A/G

NGS:0.349

C90:0.000

0.349
aPT4

UNIPROT

c.775delTp.Tyr259fsframeshift variantHIGHcontig1212831380

IGV:Start|Jump

AT/A

NGS:0.224

C90:0.000

0.224
aPT1

UNIPROT

c.406A>Gp.Ile136Valmissense variantMODERATEcontig1212839605

IGV:Start|Jump

A/G

NGS:0.579

C90:0.761

0.579
aPT1

UNIPROT

c.629C>Tp.Thr210Ilemissense variantMODERATEcontig1212840237

IGV:Start|Jump

C/T

NGS:0.561

C90:0.598

0.561


NEAREST GENETIC RELATIVES TO Pie Hoe:
# Relative Genetic Distance
1 RSP10837-Skywalker OG 4.42
2 RSP11072-SFVxTK 4.52
3 RSP11104-RKM-2018-013 4.57
4 RSP11190-Red Eye OG 4.8
5 RSP11071-Sunday Driver 5.06
6 RSP11265-Pure Power Plant 5.41
7 RSP11353-Rugburn OG 5.61
8 RSP11050-Hermaphrodite ResearchSample2 5.69
9 RSP11126-RKM-2018-034 5.7
10 RSP11355-SHERBERT 5.94
11 RSP11118-RKM-2018-026 5.95
12 RSP11099-RKM-2018-008 5.96
13 RSP11043-Hermaphrodite ResearchSample2 6.05
14 RSP11341-Garlic 6.08
15 RSP10937-Eran Almog 6.14
16 RSP10684-Blueberry Cheesecake 6.29
17 RSP10988-The Gift 6.39
18 RSP11362-NSPM1 6.42
19 RSP11230-Jilly bean 6.5
20 RSP11167-Casco Kush 6.57
NEAREST GENETIC RELATIVES TO BASE TREE:
# Relative Genetic Distance
1 RSP10837-Skywalker OG 4.49
2 RSP11050-Hermaphrodite ResearchSample2 5.79
3 RSP11126-RKM-2018-034 5.83
4 RSP10988-The Gift 6.07
5 RSP11118-RKM-2018-026 6.09
6 RSP10684-Blueberry Cheesecake 6.45
7 RSP11000-Liberty Haze 6.95
8 RSP11124-RKM-2018-032 6.97
9 RSP10680-Blueberry Cheesecake 7.17
10 RSP11112-RKM-2018-020 7.19
11 RSP10997-Kimbo Slice 7.28
12 RSP11014-Durban Poison 7.34
13 RSP11093-RKM-2018-002 7.36
14 RSP11049-Hermaphrodite Research Sample1 7.56
15 RSP11128-Kush Hemp E1 7.77
16 RSP10755-Recon 7.89
17 RSP11038-Skunk 18 8.01
18 RSP11048-Gold Cracker 8.06
19 RSP11125-RKM-2018-033 8.14
20 RSP11096-RKM-2018-005 8.2
NEAREST GENETIC RELATIVES IN PHYLOS DATASET:
Phylos Strain Number of Overlapping SNPs Concordance
SRR8349406 116 70
NEAREST GENETIC RELATIVES IN LYNCH DATASET:
Nearest Lynch Strain Number of Overlapping SNPs Concordance
SRR3495176 8 8

Blockchain Registration Information:

Transaction ID: 1dcca5e99e4d9a400c7907d9d19759475fe8e6c41e769388f6e821c4c6ba1f7c
Stamping Certificate: PDF
SHASUM Hash: a115a8127cd64eb60916123f09549278fd37d0344f90f6eec602d7b2585ee68d