Arcata Trainwreck

RSP11176
StrainSEEK Cannabis Certification Report

Accession Date:

June 26, 2019

General Information

Strain: Arcata Trainwreck
Sample: Arcata Trainwreck _29NOV2016
RSP ID: RSP11176
Grower: NETA
Accession Date: June 26, 2019
Gender: Female
Strain Seek Version: V2


What does this visualization mean?

Chemical Information*


Cannabinoid and Terpenoid information provided by our Partner Labs.

CANNABINOIDS

THC + THCA %: 12.6
CBD + CBDA %: 0
THCV + THCVA %: 0
CBC + CBCA %: 0.1
CBG + CBGA %: 0.6
CBN + CBNA %: 0

TERPENOIDS

  • α-Bisabolol %: 0.002
    Borneol %: 0.002
    Camphene %: 0.003
    Carene %: 0.014
    Caryophyllene oxide %: N/A
    β-Carophyllene %: 0.086
    Fenchol %: 0.001
    Geraniol %: ND
    α-Humulene %: 0.025
    Limonene %: 0.045
    Linalool %: 0.006
  • Myrcene %: 0.05
    α-Phellandrene %: 0.011
    Terpinolene %: 0.198
    α-Terpineol %: 0.016
    α-Terpinene %: 0.012
    γ-Terpinene %: 0.01
    Total Nerolidol %: 0.005
    Total Ocimene %: 0.043
    α-Pinene %: 0.042
    β-Pinene %: 0.064

Genetic Information

View this strain on the Phylotree
Percent Heterozygosity: 1.99
Download VCF file: Here
Download FastQ Files: Read 1 Read 2
Download BAM file: BAM index
Download Annotated Variants: ANNOTATED VCF index
Plant Type: Type I

Bt/Bd ALLELE COVERAGE

What does this visualization mean?

CBCAS COVERAGE


What does this visualization mean?


VARIANTS (THCAS, CBDAS, and CBCAS)

Gene HGVS.c HGVS.p Annotation Annotation Impact Contig Contig Pos Ref/Alt Var Freq
CBCASc.1420C>Tp.Pro474Sermissense variantMODERATEcontig7563100726

IGV:Start|Jump

C/T

NGS:0.009

C90:0.000

0.009



VARIANTS (SELECT GENES OF INTEREST)

Gene HGVS.c HGVS.p Annotation Annotation Impact Contig Contig Pos Ref/Alt Var Freq
PKSA-3b

UNIPROT

c.298G>Ap.Ala100Thrmissense variantMODERATEcontig7052271640

IGV:Start|Jump

C/T

NGS:0.044

C90:0.177

0.044
EMF1-2

UNIPROT

c.3G>Tp.Met1?start lostHIGHcontig885103

IGV:Start|Jump

G/T

NGS:0.007

C90:0.000

0.007
EMF1-2

UNIPROT

c.349G>Ap.Asp117Asnmissense variantMODERATEcontig885449

IGV:Start|Jump

G/A

NGS:0.004

C90:0.000

0.004
EMF1-2

UNIPROT

c.572A>Gp.Asn191Sermissense variantMODERATEcontig885672

IGV:Start|Jump

A/G

NGS:0.004

C90:0.000

0.004
EMF1-2

UNIPROT

c.710A>Cp.His237Promissense variantMODERATEcontig885810

IGV:Start|Jump

A/C

NGS:0.090

C90:0.474

0.09
EMF1-2

UNIPROT

c.1148C>Tp.Ala383Valmissense variantMODERATEcontig8852034

IGV:Start|Jump

C/T

NGS:0.007

C90:0.000

0.007
EMF1-2

UNIPROT

c.1187T>Cp.Leu396Sermissense variantMODERATEcontig8852073

IGV:Start|Jump

T/C

NGS:0.026

C90:0.000

0.026
EMF1-2

UNIPROT

c.1189G>Ap.Ala397Thrmissense variantMODERATEcontig8852075

IGV:Start|Jump

G/A

NGS:0.007

C90:0.000

0.007
EMF1-2

UNIPROT

c.1199G>Ap.Arg400Lysmissense variantMODERATEcontig8852085

IGV:Start|Jump

G/A

NGS:0.007

C90:0.000

0.007
EMF1-2

UNIPROT

c.1332_1336delCCAGCp.Gln445fsframeshift variantHIGHcontig8852217

IGV:Start|Jump

GCCAGC/G

NGS:0.002

C90:0.000

0.002
EMF1-2

UNIPROT

c.1331G>Ap.Ser444Asnmissense variantMODERATEcontig8852217

IGV:Start|Jump

GCCAGC/ACCAGC

NGS:0.004

C90:0.000

0.004
EMF1-2

UNIPROT

c.1409G>Ap.Arg470Lysmissense variantMODERATEcontig8852295

IGV:Start|Jump

G/A

NGS:0.007

C90:0.000

0.007
EMF1-2

UNIPROT

c.1828A>Gp.Ile610Valmissense variantMODERATEcontig8852714

IGV:Start|Jump

A/G

NGS:0.007

C90:0.000

0.007
EMF1-2

UNIPROT

c.2008C>Tp.Pro670Sermissense variantMODERATEcontig8852894

IGV:Start|Jump

C/T

NGS:0.007

C90:0.000

0.007
EMF1-2

UNIPROT

c.2256A>Tp.Lys752Asnmissense variantMODERATEcontig8853142

IGV:Start|Jump

A/T

NGS:0.026

C90:0.000

0.026
EMF1-2

UNIPROT

c.2653A>Gp.Thr885Alamissense variantMODERATEcontig8853539

IGV:Start|Jump

A/G

NGS:0.007

C90:0.000

0.007
PHL-2

UNIPROT

c.44G>Ap.Arg15Lysmissense variantMODERATEcontig2621337613

IGV:Start|Jump

G/A

NGS:0.015

C90:0.167

0.015
PHL-2

UNIPROT

c.575T>Cp.Ile192Thrmissense variantMODERATEcontig2621339568

IGV:Start|Jump

T/C

NGS:0.009

C90:0.000

0.009
PHL-2

UNIPROT

c.932T>Cp.Leu311Promissense variantMODERATEcontig2621340210

IGV:Start|Jump

T/C

NGS:0.039

C90:0.268

0.039
PHL-2

UNIPROT

c.1057A>Gp.Arg353Glymissense variantMODERATEcontig2621340335

IGV:Start|Jump

A/G

NGS:0.096

C90:0.555

0.096
PHL-2

UNIPROT

c.1096G>Ap.Ala366Thrmissense variantMODERATEcontig2621340374

IGV:Start|Jump

G/A

NGS:0.090

C90:0.531

0.09
PHL-2

UNIPROT

c.1837G>Ap.Glu613Lysmissense variantMODERATEcontig2621341115

IGV:Start|Jump

G/A

NGS:0.009

C90:0.000

0.009
PHL-2

UNIPROT

c.2564T>Ap.Phe855Tyrmissense variantMODERATEcontig2621342607

IGV:Start|Jump

T/A

NGS:0.064

C90:0.732

0.064
PHL-2

UNIPROT

c.2578T>Ap.Leu860Ilemissense variantMODERATEcontig2621342621

IGV:Start|Jump

T/A

NGS:0.068

C90:0.746

0.068
PHL-2

UNIPROT

c.2624C>Tp.Ser875Phemissense variantMODERATEcontig2621342667

IGV:Start|Jump

C/T

NGS:0.042

C90:0.268

0.042
PHL-2

UNIPROT

c.2783G>Ap.Ser928Asnmissense variantMODERATEcontig2621342826

IGV:Start|Jump

G/A

NGS:0.107

C90:0.890

0.107
PHL-2

UNIPROT

c.2830A>Cp.Asn944Hismissense variantMODERATEcontig2621342873

IGV:Start|Jump

A/C

NGS:0.044

C90:0.000

0.044
PHL-2

UNIPROT

c.2834A>Gp.Asn945Sermissense variantMODERATEcontig2621342877

IGV:Start|Jump

A/G

NGS:0.004

C90:0.000

0.004
PHL-2

UNIPROT

c.2903_2905dupGCAp.Ser968dupdisruptive inframe insertionMODERATEcontig2621342939

IGV:Start|Jump

T/TGCA

NGS:0.018

C90:0.522

0.018
PHL-2

UNIPROT

c.2933G>Tp.Arg978Leumissense variantMODERATEcontig2621342976

IGV:Start|Jump

G/T

NGS:0.048

C90:0.297

0.048
PHL-2

UNIPROT

c.2936T>Gp.Val979Glymissense variantMODERATEcontig2621342979

IGV:Start|Jump

T/G

NGS:0.048

C90:0.000

0.048
PHL-2

UNIPROT

c.3209A>Gp.Gln1070Argmissense variantMODERATEcontig2621343252

IGV:Start|Jump

A/G

NGS:0.103

C90:0.885

0.103
PHL-2

UNIPROT

c.3379C>Gp.His1127Aspmissense variantMODERATEcontig2621343422

IGV:Start|Jump

C/G

NGS:0.004

C90:0.000

0.004
PHL-2

UNIPROT

c.3380A>Gp.His1127Argmissense variantMODERATEcontig2621343423

IGV:Start|Jump

A/G

NGS:0.004

C90:0.000

0.004
PHL-2

UNIPROT

c.3381T>Ap.His1127Glnmissense variantMODERATEcontig2621343424

IGV:Start|Jump

T/A

NGS:0.004

C90:0.000

0.004
PHL-2

UNIPROT

c.3457A>Gp.Thr1153Alamissense variantMODERATEcontig2621343500

IGV:Start|Jump

A/G

NGS:0.002

C90:0.000

0.002
PHL-2

UNIPROT

c.3467A>Gp.Gln1156Argmissense variantMODERATEcontig2621343510

IGV:Start|Jump

A/G

NGS:0.064

C90:0.713

0.064
PHL-2

UNIPROT

c.3556_3557delAAp.Lys1186fsframeshift variantHIGHcontig2621343598

IGV:Start|Jump

GAA/G

NGS:0.013

C90:0.096

0.013
PKSG-2a

UNIPROT

c.67T>Ap.Phe23Ilemissense variantMODERATEcontig7001945567

IGV:Start|Jump

A/T

NGS:0.825

C90:0.904

0.825
PKSG-2a

UNIPROT

c.31A>Tp.Thr11Sermissense variantMODERATEcontig7001945603

IGV:Start|Jump

T/A

NGS:0.763

C90:0.876

0.763
PKSG-2b

UNIPROT

c.1152T>Ap.Asn384Lysmissense variantMODERATEcontig7001950486

IGV:Start|Jump

A/T

NGS:0.715

C90:0.895

0.715
PKSG-2b

UNIPROT

c.1132C>Gp.Leu378Valmissense variantMODERATEcontig7001950506

IGV:Start|Jump

G/C

NGS:0.717

C90:0.000

0.717
PKSG-2b

UNIPROT

c.1117A>Gp.Ile373Valmissense variantMODERATEcontig7001950521

IGV:Start|Jump

T/C

NGS:0.807

C90:0.981

0.807
PKSG-2b

UNIPROT

c.774G>Ap.Met258Ilemissense variantMODERATEcontig7001950864

IGV:Start|Jump

C/T

NGS:0.366

C90:0.947

0.366
PKSG-2b

UNIPROT

c.718T>Ap.Phe240Ilemissense variantMODERATEcontig7001950920

IGV:Start|Jump

A/T

NGS:0.114

C90:0.000

0.114
PKSG-2b

UNIPROT

c.560C>Tp.Thr187Metmissense variantMODERATEcontig7001951078

IGV:Start|Jump

G/A

NGS:0.050

C90:0.000

0.05
PKSG-2b

UNIPROT

c.558G>Ap.Met186Ilemissense variantMODERATEcontig7001951080

IGV:Start|Jump

C/T

NGS:0.050

C90:0.000

0.05
PKSG-2b

UNIPROT

c.31A>Tp.Thr11Sermissense variantMODERATEcontig7001951851

IGV:Start|Jump

T/A

NGS:0.844

C90:0.880

0.844
PKSG-2b

UNIPROT

c.-2_1dupATAstart lost&conservative inframe insertionHIGHcontig7001951880

IGV:Start|Jump

A/ATAT

NGS:0.410

C90:0.000

0.41
PKSG-4b

UNIPROT

c.567T>Ap.Asn189Lysmissense variantMODERATEcontig7002715027

IGV:Start|Jump

A/T

NGS:0.002

C90:0.000

0.002
PKSG-4b

UNIPROT

c.535_545delATTGGAGTGGGp.Ile179fsframeshift variantHIGHcontig7002721127

IGV:Start|Jump

CCCCACTCCAAT/C

NGS:0.105

C90:0.000

0.105
PKSG-4b

UNIPROT

c.544G>Tp.Gly182Trpmissense variantMODERATEcontig7002721129

IGV:Start|Jump

C/A

NGS:0.055

C90:0.000

0.055
PKSG-4b

UNIPROT

c.541G>Cp.Val181Leumissense variantMODERATEcontig7002721132

IGV:Start|Jump

C/G

NGS:0.004

C90:0.000

0.004
PKSG-4b

UNIPROT

c.523C>Tp.His175Tyrmissense variantMODERATEcontig7002721150

IGV:Start|Jump

G/A

NGS:0.112

C90:0.325

0.112
PKSG-4b

UNIPROT

c.489delTp.Phe163fsframeshift variantHIGHcontig7002721183

IGV:Start|Jump

CA/C

NGS:0.792

C90:0.761

0.792
PKSG-4b

UNIPROT

c.352_355delACAGp.Thr118fsframeshift variantHIGHcontig7002721317

IGV:Start|Jump

CCTGT/C

NGS:0.529

C90:0.000

0.529
PKSG-4b

UNIPROT

c.353_354insCCp.Gly119fsframeshift variantHIGHcontig7002721319

IGV:Start|Jump

T/TGG

NGS:0.175

C90:0.000

0.175
PKSG-4b

UNIPROT

c.323A>Gp.Glu108Glymissense variantMODERATEcontig7002721350

IGV:Start|Jump

T/C

NGS:0.469

C90:0.000

0.469
PKSG-4b

UNIPROT

c.316+2T>Asplice donor variant&intron variantHIGHcontig7002723818

IGV:Start|Jump

A/T

NGS:0.070

C90:0.689

0.07
PKSG-4b

UNIPROT

c.229G>Ap.Gly77Sermissense variantMODERATEcontig7002724206

IGV:Start|Jump

C/T

NGS:0.042

C90:0.000

0.042
PKSG-4b

UNIPROT

c.216G>Cp.Leu72Phemissense variantMODERATEcontig7002724219

IGV:Start|Jump

C/G

NGS:0.044

C90:0.000

0.044
PKSG-4b

UNIPROT

c.206T>Cp.Leu69Sermissense variantMODERATEcontig7002724229

IGV:Start|Jump

A/G

NGS:0.044

C90:0.000

0.044
PKSG-4b

UNIPROT

c.143G>Ap.Arg48Glnmissense variantMODERATEcontig7002724292

IGV:Start|Jump

C/T

NGS:0.002

C90:0.000

0.002
AAE1-1

UNIPROT

c.1580A>Gp.Asn527Sermissense variantMODERATEcontig6063242691

IGV:Start|Jump

T/C

NGS:0.004

C90:0.000

0.004
AAE1-1

UNIPROT

c.1504G>Ap.Asp502Asnmissense variantMODERATEcontig6063242767

IGV:Start|Jump

C/T

NGS:0.004

C90:0.000

0.004
AAE1-1

UNIPROT

c.946G>Ap.Ala316Thrmissense variantMODERATEcontig6063243325

IGV:Start|Jump

C/T

NGS:0.004

C90:0.000

0.004
AAE1-1

UNIPROT

c.454A>Gp.Lys152Glumissense variantMODERATEcontig6063243817

IGV:Start|Jump

T/C

NGS:0.007

C90:0.000

0.007
DXR-2

UNIPROT

c.1319T>Cp.Ile440Thrmissense variantMODERATEcontig380285250

IGV:Start|Jump

A/G

NGS:0.480

C90:0.000

0.48
FAD2-2

UNIPROT

c.196T>Cp.Phe66Leumissense variantMODERATEcontig831803173

IGV:Start|Jump

A/G

NGS:0.033

C90:0.000

0.033
FAD2-2

UNIPROT

c.172G>Tp.Asp58Tyrmissense variantMODERATEcontig831803197

IGV:Start|Jump

C/A

NGS:0.070

C90:0.000

0.07
FAD2-2

UNIPROT

c.161T>Ap.Leu54Hismissense variantMODERATEcontig831803208

IGV:Start|Jump

A/T

NGS:0.156

C90:0.000

0.156
ELF3

UNIPROT

c.358G>Ap.Gly120Argmissense variantMODERATEcontig97242064

IGV:Start|Jump

G/A

NGS:0.099

C90:0.493

0.099
ELF3

UNIPROT

c.520A>Cp.Asn174Hismissense variantMODERATEcontig97242226

IGV:Start|Jump

A/C

NGS:0.094

C90:0.502

0.094
ELF3

UNIPROT

c.574A>Gp.Asn192Aspmissense variantMODERATEcontig97242280

IGV:Start|Jump

A/G

NGS:0.042

C90:0.579

0.042
ELF3

UNIPROT

c.772A>Gp.Ser258Glymissense variantMODERATEcontig97242478

IGV:Start|Jump

A/G

NGS:0.112

C90:0.000

0.112
ELF3

UNIPROT

c.812G>Cp.Gly271Alamissense variantMODERATEcontig97242518

IGV:Start|Jump

G/C

NGS:0.114

C90:0.938

0.114
ELF3

UNIPROT

c.1230-2_1230-1delAGsplice acceptor variant&intron variantHIGHcontig97243676

IGV:Start|Jump

TAG/T

NGS:0.088

C90:0.450

0.088
ELF3

UNIPROT

c.1466G>Ap.Ser489Asnmissense variantMODERATEcontig97244297

IGV:Start|Jump

G/A

NGS:0.123

C90:0.000

0.123
ELF3

UNIPROT

c.1630A>Gp.Thr544Alamissense variantMODERATEcontig97244461

IGV:Start|Jump

A/G

NGS:0.103

C90:0.545

0.103
ELF3

UNIPROT

c.1803_1805delTCAp.His601deldisruptive inframe deletionMODERATEcontig97244625

IGV:Start|Jump

ACAT/A

NGS:0.092

C90:0.000

0.092
ELF3

UNIPROT

c.1966C>Gp.Pro656Alamissense variantMODERATEcontig97244797

IGV:Start|Jump

C/G

NGS:0.123

C90:0.632

0.123
ELF3

UNIPROT

c.2141C>Gp.Pro714Argmissense variantMODERATEcontig97244972

IGV:Start|Jump

C/G

NGS:0.088

C90:0.335

0.088
ELF3

UNIPROT

c.2198G>Tp.Arg733Leumissense variantMODERATEcontig97245029

IGV:Start|Jump

G/T

NGS:0.125

C90:0.531

0.125
ELF3

UNIPROT

c.2216A>Gp.His739Argmissense variantMODERATEcontig97245047

IGV:Start|Jump

A/G

NGS:0.020

C90:0.182

0.02
aPT4

UNIPROT

c.35A>Cp.Gln12Promissense variantMODERATEcontig1212828691

IGV:Start|Jump

A/C

NGS:0.075

C90:0.000

0.075
aPT4

UNIPROT

c.80A>Gp.Lys27Argmissense variantMODERATEcontig1212828736

IGV:Start|Jump

A/G

NGS:0.061

C90:0.000

0.061
aPT4

UNIPROT

c.202T>Ap.Leu68Ilemissense variantMODERATEcontig1212828858

IGV:Start|Jump

T/A

NGS:0.068

C90:0.000

0.068
aPT4

UNIPROT

c.216A>Tp.Lys72Asnmissense variantMODERATEcontig1212828872

IGV:Start|Jump

A/T

NGS:0.075

C90:0.000

0.075
aPT4

UNIPROT

c.916C>Tp.His306Tyrmissense variant&splice region variantMODERATEcontig1212832711

IGV:Start|Jump

C/T

NGS:0.015

C90:0.000

0.015
aPT4

UNIPROT

c.1111C>Ap.Leu371Ilemissense variantMODERATEcontig1212833296

IGV:Start|Jump

C/A

NGS:0.044

C90:0.000

0.044
aPT4

UNIPROT

c.1168T>Cp.Tyr390Hismissense variantMODERATEcontig1212833503

IGV:Start|Jump

T/C

NGS:0.546

C90:0.000

0.546
aPT1

UNIPROT

c.160A>Cp.Thr54Promissense variantMODERATEcontig1212835867

IGV:Start|Jump

A/C

NGS:0.086

C90:0.048

0.086
aPT1

UNIPROT

c.406A>Gp.Ile136Valmissense variantMODERATEcontig1212839605

IGV:Start|Jump

A/G

NGS:0.579

C90:0.761

0.579
aPT1

UNIPROT

c.670T>Ap.Ser224Thrmissense variantMODERATEcontig1212840278

IGV:Start|Jump

T/A

NGS:0.077

C90:0.000

0.077
aPT1

UNIPROT

c.727G>Tp.Glu243*stop gainedHIGHcontig1212841362

IGV:Start|Jump

G/T

NGS:0.127

C90:0.100

0.127
aPT1

UNIPROT

c.864C>Gp.Asn288Lysmissense variantMODERATEcontig1212842407

IGV:Start|Jump

C/G

NGS:0.075

C90:0.062

0.075
HDS-2

UNIPROT

c.82_93delGTAACCGGAACTp.Val28_Thr31delconservative inframe deletionMODERATEcontig951989748

IGV:Start|Jump

CGTAACCGGAACT/C

NGS:0.805

C90:0.000

0.805
HDS-2

UNIPROT

c.127T>Gp.Ser43Alamissense variantMODERATEcontig951989794

IGV:Start|Jump

T/G

NGS:0.721

C90:0.000

0.721
AAE1-2

UNIPROT

c.331A>Gp.Asn111Aspmissense variantMODERATEcontig81209293

IGV:Start|Jump

A/G

NGS:0.123

C90:0.000

0.123
AAE1-2

UNIPROT

c.688G>Ap.Asp230Asnmissense variantMODERATEcontig81209650

IGV:Start|Jump

G/A

NGS:0.018

C90:0.000

0.018
AAE1-2

UNIPROT

c.1415G>Ap.Ser472Asnmissense variantMODERATEcontig81210377

IGV:Start|Jump

G/A

NGS:0.070

C90:0.000

0.07
AAE1-2

UNIPROT

c.1417A>Gp.Thr473Alamissense variantMODERATEcontig81210379

IGV:Start|Jump

A/G

NGS:0.070

C90:0.000

0.07
AAE1-2

UNIPROT

c.1434G>Tp.Glu478Aspmissense variantMODERATEcontig81210396

IGV:Start|Jump

G/T

NGS:0.075

C90:0.000

0.075
AAE1-2

UNIPROT

c.1541T>Cp.Val514Alamissense variantMODERATEcontig81210503

IGV:Start|Jump

T/C

NGS:0.050

C90:0.000

0.05
PHL-1

UNIPROT

c.2623A>Gp.Thr875Alamissense variantMODERATEcontig14391487174

IGV:Start|Jump

T/C

NGS:0.123

C90:0.000

0.123
PHL-1

UNIPROT

c.2551A>Gp.Thr851Alamissense variantMODERATEcontig14391487246

IGV:Start|Jump

T/C

NGS:0.116

C90:0.890

0.116
PHL-1

UNIPROT

c.1387A>Gp.Thr463Alamissense variantMODERATEcontig14391489811

IGV:Start|Jump

T/C

NGS:0.107

C90:0.904

0.107
TFL1

UNIPROT

c.314_315delCAp.Thr105fsframeshift variantHIGHcontig1636520601

IGV:Start|Jump

CTG/C

NGS:0.004

C90:0.057

0.004
HDS-1

UNIPROT

c.1618A>Gp.Ile540Valmissense variantMODERATEcontig1891885936

IGV:Start|Jump

T/C

NGS:0.099

C90:0.861

0.099
HDS-1

UNIPROT

c.1475C>Ap.Pro492Glnmissense variantMODERATEcontig1891886162

IGV:Start|Jump

G/T

NGS:0.011

C90:0.000

0.011
HDS-1

UNIPROT

c.1393G>Ap.Ala465Thrmissense variant&splice region variantMODERATEcontig1891886355

IGV:Start|Jump

C/T

NGS:0.009

C90:0.091

0.009
HDS-1

UNIPROT

c.1378G>Ap.Val460Ilemissense variantMODERATEcontig1891886370

IGV:Start|Jump

C/T

NGS:0.167

C90:0.000

0.167
HDS-1

UNIPROT

c.56C>Gp.Ala19Glymissense variantMODERATEcontig1891889336

IGV:Start|Jump

G/C

NGS:0.125

C90:0.943

0.125
HDS-1

UNIPROT

c.35G>Ap.Cys12Tyrmissense variantMODERATEcontig1891889357

IGV:Start|Jump

C/T

NGS:0.094

C90:0.646

0.094
HDS-1

UNIPROT

c.-108+1_-108+2insGsplice donor variant&intron variantHIGHcontig1891889975

IGV:Start|Jump

A/AC

NGS:0.217

C90:0.000

0.217
FAD2

UNIPROT

c.148G>Ap.Val50Ilemissense variantMODERATEcontig14601084112

IGV:Start|Jump

C/T

NGS:0.004

C90:0.000

0.004
FAD2

UNIPROT

c.94A>Gp.Thr32Alamissense variantMODERATEcontig14601084166

IGV:Start|Jump

T/C

NGS:0.015

C90:0.000

0.015
PIE1-2

UNIPROT

c.6773T>Cp.Leu2258Sermissense variantMODERATEcontig14601184314

IGV:Start|Jump

A/G

NGS:0.046

C90:0.675

0.046
PIE1-2

UNIPROT

c.6653A>Gp.Asn2218Sermissense variantMODERATEcontig14601184434

IGV:Start|Jump

T/C

NGS:0.059

C90:0.928

0.059
PIE1-2

UNIPROT

c.6636T>Gp.Asp2212Glumissense variantMODERATEcontig14601184451

IGV:Start|Jump

A/C

NGS:0.035

C90:0.885

0.035
PIE1-2

UNIPROT

c.6623C>Tp.Ala2208Valmissense variantMODERATEcontig14601184464

IGV:Start|Jump

G/A

NGS:0.044

C90:0.689

0.044
PIE1-2

UNIPROT

c.6149G>Ap.Arg2050Lysmissense variantMODERATEcontig14601185335

IGV:Start|Jump

C/T

NGS:0.011

C90:0.234

0.011
PIE1-2

UNIPROT

c.1872T>Ap.Asp624Glumissense variantMODERATEcontig14601190252

IGV:Start|Jump

A/T

NGS:0.086

C90:0.990

0.086
PIE1-2

UNIPROT

c.1630G>Cp.Ala544Promissense variantMODERATEcontig14601191600

IGV:Start|Jump

C/G

NGS:0.070

C90:0.933

0.07
PIE1-2

UNIPROT

c.1289A>Gp.Asp430Glymissense variantMODERATEcontig14601192109

IGV:Start|Jump

T/C

NGS: