Chem 91

RSP11185
StrainSEEK Cannabis Certification Report

Accession Date:

June 27, 2019

General Information

Strain: Chem 91
RSP ID: RSP11185
Grower: Slater Center
Accession Date: June 27, 2019
Gender: Female
Strain Seek Version: V2


What does this visualization mean?

Chemical Information*


Cannabinoid and Terpenoid information provided by our Partner Labs.

CANNABINOIDS

THC + THCA %: 23.61
CBD + CBDA %: 0.07
THCV + THCVA %: N/A
CBC + CBCA %: 0.01
CBG + CBGA %: 1.25
CBN + CBNA %: N/A

TERPENOIDS

  • α-Bisabolol %: N/A
    Borneol %: N/A
    Camphene %: N/A
    Carene %: N/A
    Caryophyllene oxide %: N/A
    β-Carophyllene %: 0.417
    Fenchol %: N/A
    Geraniol %: N/A
    α-Humulene %: 0.143
    Limonene %: 0.528
    Linalool %: 0.299
  • Myrcene %: 1.032
    α-Phellandrene %: N/A
    Terpinolene %: 0.022
    α-Terpineol %: 0.034
    α-Terpinene %: N/A
    γ-Terpinene %: N/A
    Total Nerolidol %: 0.214
    Total Ocimene %: N/A
    α-Pinene %: 0.041
    β-Pinene %: 0.077

Genetic Information

View this strain on the Phylotree
Percent Heterozygosity: 1.38
Download VCF file: Here
Download FastQ Files: Read 1 Read 2
Download BAM file: BAM index
Download Annotated Variants: ANNOTATED VCF index
Plant Type: Type I

Bt/Bd ALLELE COVERAGE

What does this visualization mean?


VARIANTS (SELECT GENES OF INTEREST)

Gene HGVS.c HGVS.p Annotation Annotation Impact Contig Contig Pos Ref/Alt Var Freq
EMF1-2

UNIPROT

c.710A>Cp.His237Promissense variantMODERATEcontig885810

IGV:Start|Jump

A/C

NGS:0.090

C90:0.474

0.09
PHL-2

UNIPROT

c.932T>Cp.Leu311Promissense variantMODERATEcontig2621340210

IGV:Start|Jump

T/C

NGS:0.039

C90:0.268

0.039
PHL-2

UNIPROT

c.1057A>Gp.Arg353Glymissense variantMODERATEcontig2621340335

IGV:Start|Jump

A/G

NGS:0.096

C90:0.555

0.096
PHL-2

UNIPROT

c.1096G>Ap.Ala366Thrmissense variantMODERATEcontig2621340374

IGV:Start|Jump

G/A

NGS:0.090

C90:0.531

0.09
PHL-2

UNIPROT

c.2564T>Ap.Phe855Tyrmissense variantMODERATEcontig2621342607

IGV:Start|Jump

T/A

NGS:0.064

C90:0.732

0.064
PHL-2

UNIPROT

c.2578T>Ap.Leu860Ilemissense variantMODERATEcontig2621342621

IGV:Start|Jump

T/A

NGS:0.068

C90:0.746

0.068
PHL-2

UNIPROT

c.2624C>Tp.Ser875Phemissense variantMODERATEcontig2621342667

IGV:Start|Jump

C/T

NGS:0.042

C90:0.268

0.042
PHL-2

UNIPROT

c.2783G>Ap.Ser928Asnmissense variantMODERATEcontig2621342826

IGV:Start|Jump

G/A

NGS:0.107

C90:0.890

0.107
PHL-2

UNIPROT

c.2830A>Cp.Asn944Hismissense variantMODERATEcontig2621342873

IGV:Start|Jump

A/C

NGS:0.044

C90:0.000

0.044
PHL-2

UNIPROT

c.2933G>Tp.Arg978Leumissense variantMODERATEcontig2621342976

IGV:Start|Jump

G/T

NGS:0.048

C90:0.297

0.048
PHL-2

UNIPROT

c.2936T>Gp.Val979Glymissense variantMODERATEcontig2621342979

IGV:Start|Jump

T/G

NGS:0.048

C90:0.000

0.048
PHL-2

UNIPROT

c.3209A>Gp.Gln1070Argmissense variantMODERATEcontig2621343252

IGV:Start|Jump

A/G

NGS:0.103

C90:0.885

0.103
PHL-2

UNIPROT

c.3467A>Gp.Gln1156Argmissense variantMODERATEcontig2621343510

IGV:Start|Jump

A/G

NGS:0.064

C90:0.713

0.064
PKSG-2a

UNIPROT

c.67T>Ap.Phe23Ilemissense variantMODERATEcontig7001945567

IGV:Start|Jump

A/T

NGS:0.825

C90:0.904

0.825
PKSG-2a

UNIPROT

c.31A>Tp.Thr11Sermissense variantMODERATEcontig7001945603

IGV:Start|Jump

T/A

NGS:0.763

C90:0.876

0.763
PKSG-2b

UNIPROT

c.1152T>Ap.Asn384Lysmissense variantMODERATEcontig7001950486

IGV:Start|Jump

A/T

NGS:0.715

C90:0.895

0.715
PKSG-2b

UNIPROT

c.1132C>Gp.Leu378Valmissense variantMODERATEcontig7001950506

IGV:Start|Jump

G/C

NGS:0.717

C90:0.000

0.717
PKSG-2b

UNIPROT

c.1117A>Gp.Ile373Valmissense variantMODERATEcontig7001950521

IGV:Start|Jump

T/C

NGS:0.807

C90:0.981

0.807
PKSG-2b

UNIPROT

c.948T>Gp.Asp316Glumissense variantMODERATEcontig7001950690

IGV:Start|Jump

A/C

NGS:0.456

C90:0.000

0.456
PKSG-2b

UNIPROT

c.945T>Gp.Ser315Argmissense variantMODERATEcontig7001950693

IGV:Start|Jump

A/C

NGS:0.454

C90:0.000

0.454
PKSG-2b

UNIPROT

c.944G>Ap.Ser315Asnmissense variantMODERATEcontig7001950694

IGV:Start|Jump

C/T

NGS:0.445

C90:0.000

0.445
PKSG-2b

UNIPROT

c.934C>Gp.His312Aspmissense variantMODERATEcontig7001950704

IGV:Start|Jump

G/C

NGS:0.410

C90:0.000

0.41
PKSG-2b

UNIPROT

c.774G>Ap.Met258Ilemissense variantMODERATEcontig7001950864

IGV:Start|Jump

C/T

NGS:0.366

C90:0.947

0.366
PKSG-2b

UNIPROT

c.718T>Ap.Phe240Ilemissense variantMODERATEcontig7001950920

IGV:Start|Jump

A/T

NGS:0.114

C90:0.000

0.114
PKSG-2b

UNIPROT

c.31A>Tp.Thr11Sermissense variantMODERATEcontig7001951851

IGV:Start|Jump

T/A

NGS:0.844

C90:0.880

0.844
PKSG-2b

UNIPROT

c.-2_1dupATAstart lost&conservative inframe insertionHIGHcontig7001951880

IGV:Start|Jump

A/ATAT

NGS:0.410

C90:0.000

0.41
PKSG-4b

UNIPROT

c.316+2T>Asplice donor variant&intron variantHIGHcontig7002723818

IGV:Start|Jump

A/T

NGS:0.070

C90:0.689

0.07
OAC-1

UNIPROT

c.260C>Gp.Ser87Cysmissense variantMODERATEcontig931118104

IGV:Start|Jump

G/C

NGS:0.053

C90:0.000

0.053
OAC-1

UNIPROT

c.220A>Gp.Ile74Valmissense variantMODERATEcontig931118144

IGV:Start|Jump

T/C

NGS:0.033

C90:0.670

0.033
FAD2-2

UNIPROT

c.172G>Tp.Asp58Tyrmissense variantMODERATEcontig831803197

IGV:Start|Jump

C/A

NGS:0.070

C90:0.000

0.07
FAD2-2

UNIPROT

c.161T>Ap.Leu54Hismissense variantMODERATEcontig831803208

IGV:Start|Jump

A/T

NGS:0.156

C90:0.000

0.156
ELF3

UNIPROT

c.358G>Ap.Gly120Argmissense variantMODERATEcontig97242064

IGV:Start|Jump

G/A

NGS:0.099

C90:0.493

0.099
ELF3

UNIPROT

c.520A>Cp.Asn174Hismissense variantMODERATEcontig97242226

IGV:Start|Jump

A/C

NGS:0.094

C90:0.502

0.094
ELF3

UNIPROT

c.772A>Gp.Ser258Glymissense variantMODERATEcontig97242478

IGV:Start|Jump

A/G

NGS:0.112

C90:0.000

0.112
ELF3

UNIPROT

c.812G>Cp.Gly271Alamissense variantMODERATEcontig97242518

IGV:Start|Jump

G/C

NGS:0.114

C90:0.938

0.114
ELF3

UNIPROT

c.1230-2_1230-1delAGsplice acceptor variant&intron variantHIGHcontig97243676

IGV:Start|Jump

TAG/T

NGS:0.088

C90:0.450

0.088
ELF3

UNIPROT

c.1466G>Ap.Ser489Asnmissense variantMODERATEcontig97244297

IGV:Start|Jump

G/A

NGS:0.123

C90:0.000

0.123
ELF3

UNIPROT

c.1630A>Gp.Thr544Alamissense variantMODERATEcontig97244461

IGV:Start|Jump

A/G

NGS:0.103

C90:0.545

0.103
ELF3

UNIPROT

c.1803_1805delTCAp.His601deldisruptive inframe deletionMODERATEcontig97244625

IGV:Start|Jump

ACAT/A

NGS:0.092

C90:0.000

0.092
ELF3

UNIPROT

c.1966C>Gp.Pro656Alamissense variantMODERATEcontig97244797

IGV:Start|Jump

C/G

NGS:0.123

C90:0.632

0.123
ELF3

UNIPROT

c.2141C>Gp.Pro714Argmissense variantMODERATEcontig97244972

IGV:Start|Jump

C/G

NGS:0.088

C90:0.335

0.088
ELF3

UNIPROT

c.2198G>Tp.Arg733Leumissense variantMODERATEcontig97245029

IGV:Start|Jump

G/T

NGS:0.125

C90:0.531

0.125
aPT4

UNIPROT

c.35A>Cp.Gln12Promissense variantMODERATEcontig1212828691

IGV:Start|Jump

A/C

NGS:0.075

C90:0.000

0.075
aPT4

UNIPROT

c.216A>Tp.Lys72Asnmissense variantMODERATEcontig1212828872

IGV:Start|Jump

A/T

NGS:0.075

C90:0.000

0.075
aPT4

UNIPROT

c.1111C>Ap.Leu371Ilemissense variantMODERATEcontig1212833296

IGV:Start|Jump

C/A

NGS:0.044

C90:0.000

0.044
aPT1

UNIPROT

c.406A>Gp.Ile136Valmissense variantMODERATEcontig1212839605

IGV:Start|Jump

A/G

NGS:0.579

C90:0.761

0.579
HDS-2

UNIPROT

c.82_93delGTAACCGGAACTp.Val28_Thr31delconservative inframe deletionMODERATEcontig951989748

IGV:Start|Jump

CGTAACCGGAACT/C

NGS:0.805

C90:0.000

0.805
HDS-2

UNIPROT

c.127T>Gp.Ser43Alamissense variantMODERATEcontig951989794

IGV:Start|Jump

T/G

NGS:0.721

C90:0.000

0.721
AAE1-2

UNIPROT

c.331A>Gp.Asn111Aspmissense variantMODERATEcontig81209293

IGV:Start|Jump

A/G

NGS:0.123

C90:0.000

0.123
AAE1-2

UNIPROT

c.1006A>Gp.Lys336Glumissense variantMODERATEcontig81209968

IGV:Start|Jump

A/G

NGS:0.116

C90:0.000

0.116
AAE1-2

UNIPROT

c.1118C>Gp.Thr373Sermissense variantMODERATEcontig81210080

IGV:Start|Jump

C/G

NGS:0.026

C90:0.000

0.026
AAE1-2

UNIPROT

c.1415G>Ap.Ser472Asnmissense variantMODERATEcontig81210377

IGV:Start|Jump

G/A

NGS:0.070

C90:0.000

0.07
AAE1-2

UNIPROT

c.1417A>Gp.Thr473Alamissense variantMODERATEcontig81210379

IGV:Start|Jump

A/G

NGS:0.070

C90:0.000

0.07
AAE1-2

UNIPROT

c.1434G>Tp.Glu478Aspmissense variantMODERATEcontig81210396

IGV:Start|Jump

G/T

NGS:0.075

C90:0.000

0.075
AAE1-2

UNIPROT

c.1541T>Cp.Val514Alamissense variantMODERATEcontig81210503

IGV:Start|Jump

T/C

NGS:0.050

C90:0.000

0.05
PHL-1

UNIPROT

c.2623A>Gp.Thr875Alamissense variantMODERATEcontig14391487174

IGV:Start|Jump

T/C

NGS:0.123

C90:0.000

0.123
PHL-1

UNIPROT

c.2551A>Gp.Thr851Alamissense variantMODERATEcontig14391487246

IGV:Start|Jump

T/C

NGS:0.116

C90:0.890

0.116
PHL-1

UNIPROT

c.1387A>Gp.Thr463Alamissense variantMODERATEcontig14391489811

IGV:Start|Jump

T/C

NGS:0.107

C90:0.904

0.107
TFL1

UNIPROT

c.302-1G>Asplice acceptor variant&intron variantHIGHcontig1636520616

IGV:Start|Jump

C/T

NGS:0.103

C90:0.794

0.103
FAD4

UNIPROT

c.121G>Tp.Val41Phemissense variantMODERATEcontig7841690873

IGV:Start|Jump

G/T

NGS:0.044

C90:0.000

0.044
FAD4

UNIPROT

c.220C>Gp.Arg74Glymissense variantMODERATEcontig7841690972

IGV:Start|Jump

C/G

NGS:0.026

C90:0.000

0.026
HDS-1

UNIPROT

c.1618A>Gp.Ile540Valmissense variantMODERATEcontig1891885936

IGV:Start|Jump

T/C

NGS:0.099

C90:0.861

0.099
HDS-1

UNIPROT

c.1378G>Ap.Val460Ilemissense variantMODERATEcontig1891886370

IGV:Start|Jump

C/T

NGS:0.167

C90:0.000

0.167
HDS-1

UNIPROT

c.56C>Gp.Ala19Glymissense variantMODERATEcontig1891889336

IGV:Start|Jump

G/C

NGS:0.125

C90:0.943

0.125
HDS-1

UNIPROT

c.35G>Ap.Cys12Tyrmissense variantMODERATEcontig1891889357

IGV:Start|Jump

C/T

NGS:0.094

C90:0.646

0.094
HDS-1

UNIPROT

c.-108+1_-108+2insGsplice donor variant&intron variantHIGHcontig1891889975

IGV:Start|Jump

A/AC

NGS:0.217

C90:0.000

0.217
PIE1-2

UNIPROT

c.6773T>Cp.Leu2258Sermissense variantMODERATEcontig14601184314

IGV:Start|Jump

A/G

NGS:0.046

C90:0.675

0.046
PIE1-2

UNIPROT

c.6055C>Tp.Leu2019Phemissense variantMODERATEcontig14601185429

IGV:Start|Jump

G/A

NGS:0.015

C90:0.469

0.015
PIE1-2

UNIPROT

c.1872T>Ap.Asp624Glumissense variantMODERATEcontig14601190252

IGV:Start|Jump

A/T

NGS:0.086

C90:0.990

0.086
PIE1-2

UNIPROT

c.1630G>Cp.Ala544Promissense variantMODERATEcontig14601191600

IGV:Start|Jump

C/G

NGS:0.070

C90:0.933

0.07
PIE1-2

UNIPROT

c.1289A>Gp.Asp430Glymissense variantMODERATEcontig14601192109

IGV:Start|Jump

T/C

NGS:0.079

C90:0.000

0.079
PIE1-2

UNIPROT

c.982G>Ap.Glu328Lysmissense variantMODERATEcontig14601192416

IGV:Start|Jump

C/T

NGS:0.050

C90:0.976

0.05
PIE1-2

UNIPROT

c.710C>Tp.Pro237Leumissense variantMODERATEcontig14601193804

IGV:Start|Jump

G/A

NGS:0.072

C90:0.866

0.072
PIE1-2

UNIPROT

c.706T>Cp.Tyr236Hismissense variantMODERATEcontig14601193808

IGV:Start|Jump

A/G

NGS:0.059

C90:0.737

0.059
PIE1-2

UNIPROT

c.637T>Ap.Ser213Thrmissense variantMODERATEcontig14601194421

IGV:Start|Jump

A/T

NGS:0.079

C90:0.885

0.079
EMF2

UNIPROT

c.1772A>Gp.Gln591Argmissense variantMODERATEcontig9543059929

IGV:Start|Jump

A/G

NGS:0.092

C90:0.876

0.092
FT

UNIPROT

c.13C>Gp.Leu5Valmissense variantMODERATEcontig15613124437

IGV:Start|Jump

C/G

NGS:0.031

C90:0.153

0.031
FT

UNIPROT

c.41_43dupATAp.Asn14dupdisruptive inframe insertionMODERATEcontig15613124441

IGV:Start|Jump

T/TTAA

NGS:0.020

C90:0.000

0.02
FT

UNIPROT

c.35_43dupATAATAATAp.Asn12_Asn14dupdisruptive inframe insertionMODERATEcontig15613124441

IGV:Start|Jump

T/TTAATAATAA

NGS:0.048

C90:0.000

0.048
AAE1-3

UNIPROT

c.722G>Ap.Arg241Lysmissense variantMODERATEcontig9761083132

IGV:Start|Jump

C/T

NGS:0.070

C90:0.000

0.07
AAE1-3

UNIPROT

c.659G>Ap.Arg220Glnmissense variantMODERATEcontig9761083195

IGV:Start|Jump

C/T

NGS:0.077

C90:0.000

0.077
AAE1-3

UNIPROT

c.634G>Cp.Gly212Argmissense variantMODERATEcontig9761083220

IGV:Start|Jump

C/G

NGS:0.116

C90:0.000

0.116
AAE1-3

UNIPROT

c.199A>Gp.Asn67Aspmissense variantMODERATEcontig9761083876

IGV:Start|Jump

T/C

NGS:0.079

C90:0.000

0.079
AAE1-3

UNIPROT

c.188A>Gp.Asn63Sermissense variantMODERATEcontig9761083887

IGV:Start|Jump

T/C

NGS:0.077

C90:0.000

0.077
PIE1-1

UNIPROT

c.100G>Ap.Glu34Lysmissense variantMODERATEcontig12252277786

IGV:Start|Jump

G/A

NGS:0.022

C90:0.478

0.022
PIE1-1

UNIPROT

c.773A>Gp.Asn258Sermissense variant&splice region variantMODERATEcontig12252279897

IGV:Start|Jump

A/G

NGS:0.033

C90:0.895

0.033
PIE1-1

UNIPROT

c.1222C>Gp.Gln408Glumissense variantMODERATEcontig12252281482

IGV:Start|Jump

C/G

NGS:0.096

C90:0.852

0.096
PIE1-1

UNIPROT

c.6725C>Tp.Ala2242Valmissense variantMODERATEcontig12252289290

IGV:Start|Jump

C/T

NGS:0.046

C90:0.737

0.046
GGR

UNIPROT

c.704A>Tp.His235Leumissense variantMODERATEcontig2282549696

IGV:Start|Jump

A/T

NGS:0.121

C90:0.000

0.121
PKSB-3

UNIPROT

c.1850_1852dupTGAp.Met617dupdisruptive inframe insertionMODERATEcontig933339945

IGV:Start|Jump

A/AGAT

NGS:0.031

C90:0.000

0.031


NEAREST GENETIC RELATIVES TO Chem 91:
# Relative Genetic Distance
1 RSP11343-Sour D 5.05
2 RSP11093-RKM-2018-002 5.26
3 RSP11103-RKM-2018-012 5.36
4 RSP11241-501st OG 5.36
5 RSP10243-East Coast Sour Diesel 5.57
6 RSP11353-Rugburn OG 5.59
7 RSP11352-Star Dawg 5.68
8 RSP11225-New York City Deisel 5.7
9 RSP11100-RKM-2018-009 6.38
10 RSP11191-Super Sour Diesel 6.38
11 RSP11104-RKM-2018-013 6.38
12 RSP11186-Mothers Milk 5 6.48
13 RSP11095-RKM-2018-004 6.67
14 RSP11109-RKM-2018-017 6.77
15 RSP11113-RKM-2018-021 6.84
16 RSP11124-RKM-2018-032 6.84
17 RSP11341-Garlic 6.85
18 RSP11096-RKM-2018-005 6.87
19 RSP11118-RKM-2018-026 6.99
20 RSP11183-Sour Tsunami x Cataract Ku 7.02
NEAREST GENETIC RELATIVES TO BASE TREE:
# Relative Genetic Distance
1 RSP11093-RKM-2018-002 5.27
2 RSP11100-RKM-2018-009 6.5
3 RSP11124-RKM-2018-032 6.81
4 RSP11096-RKM-2018-005 6.91
5 RSP10837-Skywalker OG 6.92
6 RSP11118-RKM-2018-026 7.19
7 RSP11049-Hermaphrodite Research Sample1 7.38
8 RSP11125-RKM-2018-033 8.09
9 RSP11050-Hermaphrodite ResearchSample2 8.17
10 RSP10551-Sour Raspberry 8.37
11 RSP10680-Blueberry Cheesecake 8.72
12 RSP10988-The Gift 8.8
13 RSP11112-RKM-2018-020 9.06
14 RSP10684-Blueberry Cheesecake 9.12
15 RSP11048-Gold Cracker 9.24
16 RSP11110-RKM-2018-018 9.36
17 RSP11126-RKM-2018-034 9.38
18 RSP10989-UP Sunrise 9.43
19 RSP11120-RKM-2018-028 9.48
20 RSP11014-Durban Poison 9.58
NEAREST GENETIC RELATIVES IN PHYLOS DATASET:
Phylos Strain Number of Overlapping SNPs Concordance
SRR4450138 10 8

Blockchain Registration Information:

Transaction ID: 42a7a2138d6a8f0115c3988aa290552eaed6487caa732db5a4a4beb5e5300cc7
Stamping Certificate: PDF
SHASUM Hash: 7c6bbcfbc8376810cc9ad424857f9c90b504097f74f62ea62649bb33542d1302