Cherry Blossom

RSP11300
StrainSEEK Cannabis Certification Report

Accession Date:

October 17, 2019

General Information

Strain: Cherry Blossom
Sample: CB8
RSP ID: RSP11300
Grower: Yabba Cannaba
Accession Date: October 17, 2019
Gender: Female
Strain Seek Version: V2


What does this visualization mean?

Chemical Information*


Cannabinoid and Terpenoid information provided by our Partner Labs.

CANNABINOIDS

THC + THCA %: N/A
CBD + CBDA %: N/A
THCV + THCVA %: N/A
CBC + CBCA %: N/A
CBG + CBGA %: N/A
CBN + CBNA %: N/A

TERPENOIDS

  • α-Bisabolol %: N/A
    Borneol %: N/A
    Camphene %: N/A
    Carene %: N/A
    Caryophyllene oxide %: N/A
    β-Carophyllene %: N/A
    Fenchol %: N/A
    Geraniol %: N/A
    α-Humulene %: N/A
    Limonene %: N/A
    Linalool %: N/A
  • Myrcene %: N/A
    α-Phellandrene %: N/A
    Terpinolene %: N/A
    α-Terpineol %: N/A
    α-Terpinene %: N/A
    γ-Terpinene %: N/A
    Total Nerolidol %: N/A
    Total Ocimene %: N/A
    α-Pinene %: N/A
    β-Pinene %: N/A

Genetic Information

View this strain on the Phylotree
Percent Heterozygosity: 1.44
Download VCF file: Here
Download FastQ Files: Read 1 Read 2
Download BAM file: BAM index
Download Annotated Variants: ANNOTATED VCF index
Plant Type: Type III

Bt/Bd ALLELE COVERAGE

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CBCAS COVERAGE


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Y-RATIO DISTRIBUTION


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VARIANTS (THCAS, CBDAS, and CBCAS)

Gene HGVS.c HGVS.p Annotation Annotation Impact Contig Contig Pos Ref/Alt Var Freq
CBDASc.221C>Gp.Thr74Sermissense variantMODERATEcontig17722082447

IGV:Start|Jump

C/G

NGS:0.136

C90:0.057

0.136
CBDASc.1420A>Cp.Lys474Glnmissense variantMODERATEcontig17722083646

IGV:Start|Jump

A/C

NGS:0.132

C90:0.813

0.132



VARIANTS (SELECT GENES OF INTEREST)

Gene HGVS.c HGVS.p Annotation Annotation Impact Contig Contig Pos Ref/Alt Var Freq
PKSG-4a

UNIPROT

c.493G>Ap.Gly165Sermissense variantMODERATEcontig7001937904

IGV:Start|Jump

G/A

NGS:0.103

C90:0.000

0.103
PKSG-4a

UNIPROT

c.1191_1193delTTAp.Tyr398deldisruptive inframe deletionMODERATEcontig7001938600

IGV:Start|Jump

AATT/A

NGS:0.167

C90:0.000

0.167
PKSG-2a

UNIPROT

c.1117A>Gp.Ile373Valmissense variantMODERATEcontig7001944273

IGV:Start|Jump

T/C

NGS:0.101

C90:0.967

0.101
PKSG-2b

UNIPROT

c.1117A>Gp.Ile373Valmissense variantMODERATEcontig7001950521

IGV:Start|Jump

T/C

NGS:0.807

C90:0.981

0.807
PKSG-4b

UNIPROT

c.496A>Gp.Lys166Glumissense variantMODERATEcontig7002721177

IGV:Start|Jump

T/C

NGS:0.651

C90:0.684

0.651
PKSG-4b

UNIPROT

c.489delTp.Phe163fsframeshift variantHIGHcontig7002721183

IGV:Start|Jump

CA/C

NGS:0.792

C90:0.761

0.792
PKSG-4b

UNIPROT

c.485A>Gp.Lys162Argmissense variantMODERATEcontig7002721188

IGV:Start|Jump

T/C

NGS:0.643

C90:0.301

0.643
PKSG-4b

UNIPROT

c.352_355delACAGp.Thr118fsframeshift variantHIGHcontig7002721317

IGV:Start|Jump

CCTGT/C

NGS:0.529

C90:0.000

0.529
PKSG-4b

UNIPROT

c.324A>Cp.Glu108Aspmissense variantMODERATEcontig7002721349

IGV:Start|Jump

T/G

NGS:0.094

C90:0.000

0.094
PKSG-4b

UNIPROT

c.323A>Gp.Glu108Glymissense variantMODERATEcontig7002721350

IGV:Start|Jump

T/C

NGS:0.469

C90:0.000

0.469
DXR-2

UNIPROT

c.1319T>Cp.Ile440Thrmissense variantMODERATEcontig380285250

IGV:Start|Jump

A/G

NGS:0.480

C90:0.000

0.48
FAD2-2

UNIPROT

c.110C>Tp.Ala37Valmissense variantMODERATEcontig831803259

IGV:Start|Jump

G/A

NGS:0.013

C90:0.000

0.013
FAD2-2

UNIPROT

c.47_57delTGAATCATACTp.Leu16fsframeshift variantHIGHcontig831803311

IGV:Start|Jump

GAGTATGATTCA/G

NGS:0.018

C90:0.000

0.018
HDS-2

UNIPROT

c.82_93delGTAACCGGAACTp.Val28_Thr31delconservative inframe deletionMODERATEcontig951989748

IGV:Start|Jump

CGTAACCGGAACT/C

NGS:0.805

C90:0.000

0.805
HDS-2

UNIPROT

c.127T>Gp.Ser43Alamissense variantMODERATEcontig951989794

IGV:Start|Jump

T/G

NGS:0.721

C90:0.000

0.721


NEAREST GENETIC RELATIVES TO Cherry Blossom:
# Relative Genetic Distance
1 RSP11320-Cherry Blossom 4.07
2 RSP11332-Cherry Blossom 4.48
3 RSP11319-Cherry Blossom 4.54
4 RSP11312-Cherry Blossom 4.98
5 RSP11272-Unknown- Cherry Wine - 005 6.03
6 RSP11309-Cherry Blossom 6.49
7 RSP11313-Cherry Blossom 6.67
8 RSP11270-Unknown- Cherry Wine - 003 6.86
9 RSP11269-Unknown- Cherry Wine - 002 7.26
10 RSP11311-Cherry Blossom 7.51
11 RSP11304-Cherry Blossom 7.68
12 RSP11301-Cherry Blossom 7.85
13 RSP11310-Cherry Blossom 7.89
14 RSP11184-Domnesia 7.93
15 RSP11361-FL30 7.94
16 RSP10941-Midnight 7.98
17 RSP11324-Cherry Blossom 8.04
18 RSP11131-Cbot-2019-003 8.04
19 RSP11141-2nd Gen Cherry 8.13
20 RSP11349-CANNATONIC 8.17
NEAREST GENETIC RELATIVES TO BASE TREE:
# Relative Genetic Distance
1 RSP10684-Blueberry Cheesecake 8.74
2 RSP11000-Liberty Haze 8.88
3 RSP11142-Cherry 9.08
4 RSP10989-UP Sunrise 9.18
5 RSP11014-Durban Poison 9.38
6 RSP11129-Cbot-2019-001 9.69
7 RSP11048-Gold Cracker 10.71
8 RSP11133-Cbot-2019-005 10.91
9 RSP11119-RKM-2018-027 11.01
10 RSP11123-RKM-2018-031 11.02
11 RSP10991-Golden Goat 2 11.2
12 RSP10105-QUEEN JESUS 11.2
13 RSP11132-Cbot-2019-004 11.22
14 RSP11097-RKM-2018-006 11.31
15 RSP10755-Recon 11.38
16 RSP10672-Blueberry Cheesecake 11.4
17 RSP11143-Cherry 11.52
18 RSP10997-Kimbo Slice 11.62
19 RSP11050-Hermaphrodite ResearchSample2 11.64
20 RSP11112-RKM-2018-020 11.67
MOST GENETICALLY DISTANT STRAINS FROM Cherry Blossom:
# Strain Genetic Distance
1 RSP11323-Cherry Blossom 14.99
2 RSP11265-Pure Power Plant 14.61
3 RSP11190-Red Eye OG 14.22
4 RSP11353-Rugburn OG 14.15
5 RSP11241-501st OG 14.06
6 RSP11075-JL yellow 14.06
7 RSP11341-Garlic 13.92
8 RSP11277-Queen Dream CBG 13.91
9 RSP11126-RKM-2018-034 13.91
10 RSP11242-MENDO BREATH 13.87
11 RSP11228-Bordello 13.85
12 RSP11093-RKM-2018-002 13.84
13 RSP10890-Feral 13.79
14 RSP10892-Feral 13.78
15 RSP11194-JL 4th Gen 2 13.78
16 RSP11118-RKM-2018-026 13.75
17 RSP11205-Feral 13.75
18 RSP11207-Carmaleonte 13.67
19 RSP11214-JL 3rd Gen Mother 13.66
20 RSP11266-Abacus 13.63
NEAREST GENETIC RELATIVES IN PHYLOS DATASET:
Phylos Strain Number of Overlapping SNPs Concordance
SRR4448252 66 44
NEAREST GENETIC RELATIVES IN LYNCH DATASET:
Nearest Lynch Strain Number of Overlapping SNPs Concordance
SRR3495212 6 6

Blockchain Registration Information:

Transaction ID: 1d6156b42bfc661d682ca3692bf814e04621f037fd1c431a295281bb67d0d82b
Stamping Certificate: PDF
SHASUM Hash: 71ffe3791ef647147372ef29d796df6e3e318f7e55f07e79f3e15cb106d9c94b