Cherry Blossom

RSP11301
StrainSEEK Cannabis Certification Report

Accession Date:

October 17, 2019

General Information

Strain: Cherry Blossom
Sample: CE10
RSP ID: RSP11301
Grower: Yabba Cannaba
Accession Date: October 17, 2019
Gender: Female
Strain Seek Version: V2


What does this visualization mean?

Chemical Information*


Cannabinoid and Terpenoid information provided by our Partner Labs.

CANNABINOIDS

THC + THCA %: N/A
CBD + CBDA %: N/A
THCV + THCVA %: N/A
CBC + CBCA %: N/A
CBG + CBGA %: N/A
CBN + CBNA %: N/A

TERPENOIDS

  • α-Bisabolol %: N/A
    Borneol %: N/A
    Camphene %: N/A
    Carene %: N/A
    Caryophyllene oxide %: N/A
    β-Carophyllene %: N/A
    Fenchol %: N/A
    Geraniol %: N/A
    α-Humulene %: N/A
    Limonene %: N/A
    Linalool %: N/A
  • Myrcene %: N/A
    α-Phellandrene %: N/A
    Terpinolene %: N/A
    α-Terpineol %: N/A
    α-Terpinene %: N/A
    γ-Terpinene %: N/A
    Total Nerolidol %: N/A
    Total Ocimene %: N/A
    α-Pinene %: N/A
    β-Pinene %: N/A

Genetic Information

View this strain on the Phylotree
Percent Heterozygosity: 1.17
Download VCF file: Here
Download FastQ Files: Read 1 Read 2
Download BAM file: BAM index
Download Annotated Variants: ANNOTATED VCF index
Plant Type: Type III

Bt/Bd ALLELE COVERAGE

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CBCAS COVERAGE


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Y-RATIO DISTRIBUTION


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VARIANTS (THCAS, CBDAS, and CBCAS)

Gene HGVS.c HGVS.p Annotation Annotation Impact Contig Contig Pos Ref/Alt Var Freq
CBDASc.8G>Ap.Cys3Tyrmissense variantMODERATEcontig17722082234

IGV:Start|Jump

G/A

NGS:0.057

C90:0.000

0.057
CBDASc.221C>Gp.Thr74Sermissense variantMODERATEcontig17722082447

IGV:Start|Jump

C/G

NGS:0.136

C90:0.057

0.136
CBDASc.1420A>Cp.Lys474Glnmissense variantMODERATEcontig17722083646

IGV:Start|Jump

A/C

NGS:0.132

C90:0.813

0.132



VARIANTS (SELECT GENES OF INTEREST)

Gene HGVS.c HGVS.p Annotation Annotation Impact Contig Contig Pos Ref/Alt Var Freq
PKSG-4a

UNIPROT

c.493G>Ap.Gly165Sermissense variantMODERATEcontig7001937904

IGV:Start|Jump

G/A

NGS:0.103

C90:0.000

0.103
PKSG-4a

UNIPROT

c.1191_1193delTTAp.Tyr398deldisruptive inframe deletionMODERATEcontig7001938600

IGV:Start|Jump

AATT/A

NGS:0.167

C90:0.000

0.167
PKSG-2b

UNIPROT

c.1117A>Gp.Ile373Valmissense variantMODERATEcontig7001950521

IGV:Start|Jump

T/C

NGS:0.807

C90:0.981

0.807
PKSG-4b

UNIPROT

c.496A>Gp.Lys166Glumissense variantMODERATEcontig7002721177

IGV:Start|Jump

T/C

NGS:0.651

C90:0.684

0.651
PKSG-4b

UNIPROT

c.489delTp.Phe163fsframeshift variantHIGHcontig7002721183

IGV:Start|Jump

CA/C

NGS:0.792

C90:0.761

0.792
PKSG-4b

UNIPROT

c.485A>Gp.Lys162Argmissense variantMODERATEcontig7002721188

IGV:Start|Jump

T/C

NGS:0.643

C90:0.301

0.643
PKSG-4b

UNIPROT

c.352_355delACAGp.Thr118fsframeshift variantHIGHcontig7002721317

IGV:Start|Jump

CCTGT/C

NGS:0.529

C90:0.000

0.529
PKSG-4b

UNIPROT

c.324A>Cp.Glu108Aspmissense variantMODERATEcontig7002721349

IGV:Start|Jump

T/G

NGS:0.094

C90:0.000

0.094
PKSG-4b

UNIPROT

c.323A>Gp.Glu108Glymissense variantMODERATEcontig7002721350

IGV:Start|Jump

T/C

NGS:0.469

C90:0.000

0.469
HDS-2

UNIPROT

c.82_93delGTAACCGGAACTp.Val28_Thr31delconservative inframe deletionMODERATEcontig951989748

IGV:Start|Jump

CGTAACCGGAACT/C

NGS:0.805

C90:0.000

0.805
HDS-2

UNIPROT

c.127T>Gp.Ser43Alamissense variantMODERATEcontig951989794

IGV:Start|Jump

T/G

NGS:0.721

C90:0.000

0.721


NEAREST GENETIC RELATIVES TO Cherry Blossom:
# Relative Genetic Distance
1 RSP11272-Unknown- Cherry Wine - 005 5.69
2 RSP11268-Unknown- Cherry Wine - 001 6.38
3 RSP11322-Cherry Blossom 6.39
4 RSP11332-Cherry Blossom 6.61
5 RSP11321-Cherry Blossom 6.79
6 RSP11327-Cherry Blossom 6.8
7 RSP11309-Cherry Blossom 7.19
8 RSP10989-UP Sunrise 7.29
9 RSP11313-Cherry Blossom 7.43
10 RSP11320-Cherry Blossom 7.44
11 RSP11328-Cherry Blossom 7.73
12 RSP11331-Cherry Blossom 7.75
13 RSP11269-Unknown- Cherry Wine - 002 7.75
14 RSP11325-Cherry Blossom 7.81
15 RSP11300-Cherry Blossom 7.85
16 RSP11174-AVIDEKEL 2 0 7.91
17 RSP11323-Cherry Blossom 8.01
18 RSP11334-Cherry Blossom 8.01
19 RSP11010-Blue Dream 8.04
20 RSP11315-Cherry Blossom 8.06
NEAREST GENETIC RELATIVES TO BASE TREE:
# Relative Genetic Distance
1 RSP10989-UP Sunrise 7.6
2 RSP11129-Cbot-2019-001 9.18
3 RSP11143-Cherry 9.28
4 RSP11014-Durban Poison 10.35
5 RSP11033-Blue Dream 10.79
6 RSP11000-Liberty Haze 10.84
7 RSP11133-Cbot-2019-005 11.02
8 RSP11142-Cherry 11.18
9 RSP11100-RKM-2018-009 11.22
10 RSP10684-Blueberry Cheesecake 11.27
11 RSP11120-RKM-2018-028 11.27
12 RSP10997-Kimbo Slice 11.36
13 RSP11132-Cbot-2019-004 11.47
14 RSP10668-Ivory 11.47
15 RSP11048-Gold Cracker 11.5
16 RSP11097-RKM-2018-006 11.52
17 RSP10551-Sour Raspberry 11.56
18 RSP10755-Recon 11.9
19 RSP11002-CST 11.93
20 RSP10105-QUEEN JESUS 11.96
MOST GENETICALLY DISTANT STRAINS FROM Cherry Blossom:
# Strain Genetic Distance
1 RSP11114-RKM-2018-022 15.15
2 RSP11190-Red Eye OG 14.7
3 RSP11353-Rugburn OG 14.59
4 RSP11343-Sour D 14.56
5 RSP11104-RKM-2018-013 14.41
6 RSP11073-Pie Hoe 14.31
7 RSP11352-Star Dawg 14.29
8 RSP11225-New York City Deisel 14.28
9 RSP11341-Garlic 14.25
10 RSP11126-RKM-2018-034 14.2
11 RSP11093-RKM-2018-002 14.19
12 RSP11118-RKM-2018-026 14.17
13 RSP11265-Pure Power Plant 14.1
14 RSP11103-RKM-2018-012 14.02
15 RSP11208-CS 14.01
16 RSP11205-Feral 14.01
17 RSP10243-East Coast Sour Diesel 13.88
18 RSP11111-RKM-2018-019 13.87
19 RSP10837-Skywalker OG 13.76
20 RSP11241-501st OG 13.74
NEAREST GENETIC RELATIVES IN PHYLOS DATASET:
Phylos Strain Number of Overlapping SNPs Concordance
SRR8346573 65 45

Blockchain Registration Information:

Transaction ID: ae4b7e4f5365754e94f131a7da41881d91b0c0ffd5e501789471f10660d17e02
Stamping Certificate: PDF
SHASUM Hash: 5042b9d8da5406f37a92651ce0a77fc644fb69fa6c71c9aacaf45074422e9c7a