Cherry Blossom

RSP11304
StrainSEEK Cannabis Certification Report

Accession Date:

October 17, 2019

General Information

Strain: Cherry Blossom
Sample: CK9
RSP ID: RSP11304
Grower: Yabba Cannaba
Accession Date: October 17, 2019
Gender: Female
Strain Seek Version: V2


What does this visualization mean?

Chemical Information*


Cannabinoid and Terpenoid information provided by our Partner Labs.

CANNABINOIDS

THC + THCA %: N/A
CBD + CBDA %: N/A
THCV + THCVA %: N/A
CBC + CBCA %: N/A
CBG + CBGA %: N/A
CBN + CBNA %: N/A

TERPENOIDS

  • α-Bisabolol %: N/A
    Borneol %: N/A
    Camphene %: N/A
    Carene %: N/A
    Caryophyllene oxide %: N/A
    β-Carophyllene %: N/A
    Fenchol %: N/A
    Geraniol %: N/A
    α-Humulene %: N/A
    Limonene %: N/A
    Linalool %: N/A
  • Myrcene %: N/A
    α-Phellandrene %: N/A
    Terpinolene %: N/A
    α-Terpineol %: N/A
    α-Terpinene %: N/A
    γ-Terpinene %: N/A
    Total Nerolidol %: N/A
    Total Ocimene %: N/A
    α-Pinene %: N/A
    β-Pinene %: N/A

Genetic Information

View this strain on the Phylotree
Percent Heterozygosity: 1.68
Download VCF file: Here
Download FastQ Files: Read 1 Read 2
Download BAM file: BAM index
Download Annotated Variants: ANNOTATED VCF index
Plant Type: Type III

Bt/Bd ALLELE COVERAGE

What does this visualization mean?

CBCAS COVERAGE


What does this visualization mean?

Y-RATIO DISTRIBUTION


What does this visualization mean?


VARIANTS (THCAS, CBDAS, and CBCAS)

Gene HGVS.c HGVS.p Annotation Annotation Impact Contig Contig Pos Ref/Alt Var Freq
CBDASc.221C>Gp.Thr74Sermissense variantMODERATEcontig17722082447

IGV:Start|Jump

C/G

NGS:0.136

C90:0.057

0.136
CBDASc.1420A>Cp.Lys474Glnmissense variantMODERATEcontig17722083646

IGV:Start|Jump

A/C

NGS:0.132

C90:0.813

0.132



VARIANTS (SELECT GENES OF INTEREST)

Gene HGVS.c HGVS.p Annotation Annotation Impact Contig Contig Pos Ref/Alt Var Freq
PKSG-4a

UNIPROT

c.493G>Ap.Gly165Sermissense variantMODERATEcontig7001937904

IGV:Start|Jump

G/A

NGS:0.103

C90:0.000

0.103
PKSG-4a

UNIPROT

c.1191_1193delTTAp.Tyr398deldisruptive inframe deletionMODERATEcontig7001938600

IGV:Start|Jump

AATT/A

NGS:0.167

C90:0.000

0.167
PKSG-2a

UNIPROT

c.67T>Ap.Phe23Ilemissense variantMODERATEcontig7001945567

IGV:Start|Jump

A/T

NGS:0.825

C90:0.904

0.825
PKSG-2a

UNIPROT

c.31A>Tp.Thr11Sermissense variantMODERATEcontig7001945603

IGV:Start|Jump

T/A

NGS:0.763

C90:0.876

0.763
PKSG-2b

UNIPROT

c.1132C>Gp.Leu378Valmissense variantMODERATEcontig7001950506

IGV:Start|Jump

G/C

NGS:0.717

C90:0.000

0.717
PKSG-2b

UNIPROT

c.1117A>Gp.Ile373Valmissense variantMODERATEcontig7001950521

IGV:Start|Jump

T/C

NGS:0.807

C90:0.981

0.807
PKSG-2b

UNIPROT

c.31A>Tp.Thr11Sermissense variantMODERATEcontig7001951851

IGV:Start|Jump

T/A

NGS:0.844

C90:0.880

0.844
PKSG-4b

UNIPROT

c.496A>Gp.Lys166Glumissense variantMODERATEcontig7002721177

IGV:Start|Jump

T/C

NGS:0.651

C90:0.684

0.651
PKSG-4b

UNIPROT

c.489delTp.Phe163fsframeshift variantHIGHcontig7002721183

IGV:Start|Jump

CA/C

NGS:0.792

C90:0.761

0.792
PKSG-4b

UNIPROT

c.485A>Gp.Lys162Argmissense variantMODERATEcontig7002721188

IGV:Start|Jump

T/C

NGS:0.643

C90:0.301

0.643
PKSG-4b

UNIPROT

c.431T>Gp.Val144Glymissense variantMODERATEcontig7002721242

IGV:Start|Jump

A/C

NGS:0.575

C90:0.679

0.575
PKSG-4b

UNIPROT

c.419A>Gp.Asp140Glymissense variantMODERATEcontig7002721254

IGV:Start|Jump

T/C

NGS:0.430

C90:0.440

0.43
PKSG-4b

UNIPROT

c.352_355delACAGp.Thr118fsframeshift variantHIGHcontig7002721317

IGV:Start|Jump

CCTGT/C

NGS:0.529

C90:0.000

0.529
HDS-2

UNIPROT

c.82_93delGTAACCGGAACTp.Val28_Thr31delconservative inframe deletionMODERATEcontig951989748

IGV:Start|Jump

CGTAACCGGAACT/C

NGS:0.805

C90:0.000

0.805
HDS-2

UNIPROT

c.127T>Gp.Ser43Alamissense variantMODERATEcontig951989794

IGV:Start|Jump

T/G

NGS:0.721

C90:0.000

0.721


NEAREST GENETIC RELATIVES TO Cherry Blossom:
# Relative Genetic Distance
1 RSP11320-Cherry Blossom 4.11
2 RSP11145-Cherry Wine 4.17
3 RSP11332-Cherry Blossom 4.35
4 RSP11272-Unknown- Cherry Wine - 005 4.62
5 RSP11322-Cherry Blossom 4.67
6 RSP11327-Cherry Blossom 4.9
7 RSP11329-Cherry Blossom 4.96
8 RSP11305-Cherry Wine 4.97
9 RSP11307-Cherry Wine 5
10 RSP11299-Cherry Blossom 5.37
11 RSP11147-Otto 5.48
12 RSP11310-Cherry Blossom 5.51
13 RSP11326-Cherry Blossom 5.58
14 RSP11298-Cherry Blossom 5.64
15 RSP11313-Cherry Blossom 5.69
16 RSP11330-Cherry Blossom 5.7
17 RSP11306-Cherry Blossom 6.29
18 RSP11141-2nd Gen Cherry 6.3
19 RSP10941-Midnight 6.4
20 RSP10684-Blueberry Cheesecake 6.51
NEAREST GENETIC RELATIVES TO BASE TREE:
# Relative Genetic Distance
1 RSP10684-Blueberry Cheesecake 7.06
2 RSP11143-Cherry 8.29
3 RSP11000-Liberty Haze 8.57
4 RSP10989-UP Sunrise 8.7
5 RSP11014-Durban Poison 8.81
6 RSP11142-Cherry 9.15
7 RSP11129-Cbot-2019-001 9.49
8 RSP10755-Recon 9.75
9 RSP10105-QUEEN JESUS 9.8
10 RSP11123-RKM-2018-031 9.93
11 RSP10997-Kimbo Slice 10.04
12 RSP11002-CST 10.15
13 RSP11121-RKM-2018-029 10.18
14 RSP10667-Tygra 10.47
15 RSP11050-Hermaphrodite ResearchSample2 10.49
16 RSP10672-Blueberry Cheesecake 10.57
17 RSP11048-Gold Cracker 10.66
18 RSP11096-RKM-2018-005 10.67
19 RSP10991-Golden Goat 2 10.71
20 RSP10659-Tisza 10.82
MOST GENETICALLY DISTANT STRAINS FROM Cherry Blossom:
# Strain Genetic Distance
1 RSP11075-JL yellow 13.83
2 RSP11194-JL 4th Gen 2 13.81
3 RSP11118-RKM-2018-026 13.31
4 RSP11196-JL 3rd Gen Father 13.25
5 RSP11199-JL 4th Gen 5 13.07
6 RSP11128-Kush Hemp E1 13.01
7 RSP11213-80E 13
8 RSP11070-Danny Noonan 13
9 RSP11336-White Label 1 12.98
10 RSP11212-80E 12.95
11 RSP11193-JL 4th Gen 1 12.94
12 RSP11185-Chem 91 12.88
13 RSP10233-USO31 12.82
14 RSP11214-JL 3rd Gen Mother 12.78
15 RSP11266-Abacus 12.76
16 RSP10983-USO 31 12.74
17 RSP11200-JL 4th Gen 6 12.67
18 RSP11197-JL 3rd Gen Mother 12.66
19 RSP11133-Cbot-2019-005 12.64
20 RSP11103-RKM-2018-012 12.54
NEAREST GENETIC RELATIVES IN PHYLOS DATASET:
Phylos Strain Number of Overlapping SNPs Concordance
SRR8347252 66 44

Blockchain Registration Information:

Transaction ID: 98c425b42b02faefa538d93626c277d4b6d25240bea459a754d32c6b74c5b752
Stamping Certificate: PDF
SHASUM Hash: e4ecfc2e9fd5fbdcc68d7d25638c6178289ad64ee7b0f80aad2832b5a51aa4b0