Cherry Blossom

RSP11310
StrainSEEK Cannabis Certification Report

Accession Date:

October 17, 2019

General Information

Strain: Cherry Blossom
Sample: CK2
RSP ID: RSP11310
Grower: Yabba Cannaba
Accession Date: October 17, 2019
Gender: Female
Strain Seek Version: V2


What does this visualization mean?

Chemical Information*


Cannabinoid and Terpenoid information provided by our Partner Labs.

CANNABINOIDS

THC + THCA %: N/A
CBD + CBDA %: N/A
THCV + THCVA %: N/A
CBC + CBCA %: N/A
CBG + CBGA %: N/A
CBN + CBNA %: N/A

TERPENOIDS

  • α-Bisabolol %: N/A
    Borneol %: N/A
    Camphene %: N/A
    Carene %: N/A
    Caryophyllene oxide %: N/A
    β-Carophyllene %: N/A
    Fenchol %: N/A
    Geraniol %: N/A
    α-Humulene %: N/A
    Limonene %: N/A
    Linalool %: N/A
  • Myrcene %: N/A
    α-Phellandrene %: N/A
    Terpinolene %: N/A
    α-Terpineol %: N/A
    α-Terpinene %: N/A
    γ-Terpinene %: N/A
    Total Nerolidol %: N/A
    Total Ocimene %: N/A
    α-Pinene %: N/A
    β-Pinene %: N/A

Genetic Information

View this strain on the Phylotree
Percent Heterozygosity: 1.58
Download VCF file: Here
Download FastQ Files: Read 1 Read 2
Download BAM file: BAM index
Download Annotated Variants: ANNOTATED VCF index
Plant Type: Type III

Bt/Bd ALLELE COVERAGE

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CBCAS COVERAGE


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Y-RATIO DISTRIBUTION


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VARIANTS (THCAS, CBDAS, and CBCAS)

Gene HGVS.c HGVS.p Annotation Annotation Impact Contig Contig Pos Ref/Alt Var Freq
CBDASc.221C>Gp.Thr74Sermissense variantMODERATEcontig17722082447

IGV:Start|Jump

C/G

NGS:0.136

C90:0.057

0.136
CBDASc.1420A>Cp.Lys474Glnmissense variantMODERATEcontig17722083646

IGV:Start|Jump

A/C

NGS:0.132

C90:0.813

0.132



VARIANTS (SELECT GENES OF INTEREST)

Gene HGVS.c HGVS.p Annotation Annotation Impact Contig Contig Pos Ref/Alt Var Freq
PKSG-4a

UNIPROT

c.493G>Ap.Gly165Sermissense variantMODERATEcontig7001937904

IGV:Start|Jump

G/A

NGS:0.103

C90:0.000

0.103
PKSG-4a

UNIPROT

c.1191_1193delTTAp.Tyr398deldisruptive inframe deletionMODERATEcontig7001938600

IGV:Start|Jump

AATT/A

NGS:0.167

C90:0.000

0.167
PKSG-2a

UNIPROT

c.67T>Ap.Phe23Ilemissense variantMODERATEcontig7001945567

IGV:Start|Jump

A/T

NGS:0.825

C90:0.904

0.825
PKSG-2a

UNIPROT

c.31A>Tp.Thr11Sermissense variantMODERATEcontig7001945603

IGV:Start|Jump

T/A

NGS:0.763

C90:0.876

0.763
PKSG-2b

UNIPROT

c.1117A>Gp.Ile373Valmissense variantMODERATEcontig7001950521

IGV:Start|Jump

T/C

NGS:0.807

C90:0.981

0.807
PKSG-2b

UNIPROT

c.31A>Tp.Thr11Sermissense variantMODERATEcontig7001951851

IGV:Start|Jump

T/A

NGS:0.844

C90:0.880

0.844
PKSG-4b

UNIPROT

c.556A>Gp.Arg186Glymissense variant&splice region variantMODERATEcontig7002721117

IGV:Start|Jump

T/C

NGS:0.022

C90:0.000

0.022
PKSG-4b

UNIPROT

c.496A>Gp.Lys166Glumissense variantMODERATEcontig7002721177

IGV:Start|Jump

T/C

NGS:0.651

C90:0.684

0.651
PKSG-4b

UNIPROT

c.489delTp.Phe163fsframeshift variantHIGHcontig7002721183

IGV:Start|Jump

CA/C

NGS:0.792

C90:0.761

0.792
PKSG-4b

UNIPROT

c.485A>Gp.Lys162Argmissense variantMODERATEcontig7002721188

IGV:Start|Jump

T/C

NGS:0.643

C90:0.301

0.643
PKSG-4b

UNIPROT

c.431T>Gp.Val144Glymissense variantMODERATEcontig7002721242

IGV:Start|Jump

A/C

NGS:0.575

C90:0.679

0.575
PKSG-4b

UNIPROT

c.419A>Gp.Asp140Glymissense variantMODERATEcontig7002721254

IGV:Start|Jump

T/C

NGS:0.430

C90:0.440

0.43
PKSG-4b

UNIPROT

c.352_355delACAGp.Thr118fsframeshift variantHIGHcontig7002721317

IGV:Start|Jump

CCTGT/C

NGS:0.529

C90:0.000

0.529
PKSG-4b

UNIPROT

c.324A>Cp.Glu108Aspmissense variantMODERATEcontig7002721349

IGV:Start|Jump

T/G

NGS:0.094

C90:0.000

0.094
PKSG-4b

UNIPROT

c.323A>Gp.Glu108Glymissense variantMODERATEcontig7002721350

IGV:Start|Jump

T/C

NGS:0.469

C90:0.000

0.469
HDS-2

UNIPROT

c.82_93delGTAACCGGAACTp.Val28_Thr31delconservative inframe deletionMODERATEcontig951989748

IGV:Start|Jump

CGTAACCGGAACT/C

NGS:0.805

C90:0.000

0.805
HDS-2

UNIPROT

c.127T>Gp.Ser43Alamissense variantMODERATEcontig951989794

IGV:Start|Jump

T/G

NGS:0.721

C90:0.000

0.721


NEAREST GENETIC RELATIVES TO Cherry Blossom:
# Relative Genetic Distance
1 RSP11299-Cherry Blossom 4.7
2 RSP11332-Cherry Blossom 4.73
3 RSP11302-Cherry Blossom 4.76
4 RSP11272-Unknown- Cherry Wine - 005 5.31
5 RSP11328-Cherry Blossom 5.37
6 RSP11304-Cherry Blossom 5.51
7 RSP11334-Cherry Blossom 6.02
8 RSP11331-Cherry Blossom 6.22
9 RSP11320-Cherry Blossom 6.38
10 RSP11271-Unknown- Cherry Wine - 004 6.47
11 RSP11269-Unknown- Cherry Wine - 002 6.5
12 RSP10941-Midnight 6.58
13 RSP11145-Cherry Wine 6.6
14 RSP11270-Unknown- Cherry Wine - 003 6.63
15 RSP11305-Cherry Wine 6.66
16 RSP11307-Cherry Wine 6.66
17 RSP11309-Cherry Blossom 6.77
18 RSP11330-Cherry Blossom 6.77
19 RSP11243-Doug's Varin 6.84
20 RSP11361-FL30 6.87
NEAREST GENETIC RELATIVES TO BASE TREE:
# Relative Genetic Distance
1 RSP10684-Blueberry Cheesecake 8.14
2 RSP11000-Liberty Haze 8.79
3 RSP11143-Cherry 8.84
4 RSP11014-Durban Poison 9.01
5 RSP10989-UP Sunrise 9.21
6 RSP11142-Cherry 9.66
7 RSP11129-Cbot-2019-001 10.46
8 RSP10667-Tygra 10.61
9 RSP10105-QUEEN JESUS 10.63
10 RSP11123-RKM-2018-031 10.67
11 RSP10755-Recon 10.71
12 RSP10672-Blueberry Cheesecake 10.9
13 RSP11094-RKM-2018-003 10.98
14 RSP10991-Golden Goat 2 11.1
15 RSP11112-RKM-2018-020 11.16
16 RSP11096-RKM-2018-005 11.22
17 RSP11121-RKM-2018-029 11.29
18 RSP11115-RKM-2018-023 11.35
19 RSP11119-RKM-2018-027 11.47
20 RSP11134-Cbot-2019-006 11.52
MOST GENETICALLY DISTANT STRAINS FROM Cherry Blossom:
# Strain Genetic Distance
1 RSP11128-Kush Hemp E1 14.19
2 RSP11075-JL yellow 13.97
3 RSP11194-JL 4th Gen 2 13.84
4 RSP11190-Red Eye OG 13.83
5 RSP11213-80E 13.77
6 RSP11199-JL 4th Gen 5 13.72
7 RSP11118-RKM-2018-026 13.71
8 RSP11214-JL 3rd Gen Mother 13.59
9 RSP11212-80E 13.54
10 RSP11341-Garlic 13.51
11 RSP11211-80E 13.49
12 RSP10837-Skywalker OG 13.36
13 RSP11266-Abacus 13.34
14 RSP11070-Danny Noonan 13.31
15 RSP11200-JL 4th Gen 6 13.3
16 RSP11205-Feral 13.21
17 RSP11185-Chem 91 13.19
18 RSP11336-White Label 1 13.17
19 RSP10983-USO 31 13.14
20 RSP11196-JL 3rd Gen Father 13.07
NEAREST GENETIC RELATIVES IN PHYLOS DATASET:
Phylos Strain Number of Overlapping SNPs Concordance
SRR8347252 65 40
NEAREST GENETIC RELATIVES IN LYNCH DATASET:
Nearest Lynch Strain Number of Overlapping SNPs Concordance
SRR3495237 7 7

Blockchain Registration Information:

Transaction ID: 60b3d99323747c3ef9ec582da474535d58dbbd336e7814d491df26f9d7911919
Stamping Certificate: PDF
SHASUM Hash: d1269d845c79eb1c8cf56d9c25cfa1ad6d1c2d3a976673988c27c046bd36df47