Cherry Blossom

RSP11311
StrainSEEK Cannabis Certification Report

Accession Date:

October 17, 2019

General Information

Strain: Cherry Blossom
Sample: CB7
RSP ID: RSP11311
Grower: Yabba Cannaba
Accession Date: October 17, 2019
Gender: Female
Strain Seek Version: V2


What does this visualization mean?

Chemical Information*


Cannabinoid and Terpenoid information provided by our Partner Labs.

CANNABINOIDS

THC + THCA %: N/A
CBD + CBDA %: N/A
THCV + THCVA %: N/A
CBC + CBCA %: N/A
CBG + CBGA %: N/A
CBN + CBNA %: N/A

TERPENOIDS

  • α-Bisabolol %: N/A
    Borneol %: N/A
    Camphene %: N/A
    Carene %: N/A
    Caryophyllene oxide %: N/A
    β-Carophyllene %: N/A
    Fenchol %: N/A
    Geraniol %: N/A
    α-Humulene %: N/A
    Limonene %: N/A
    Linalool %: N/A
  • Myrcene %: N/A
    α-Phellandrene %: N/A
    Terpinolene %: N/A
    α-Terpineol %: N/A
    α-Terpinene %: N/A
    γ-Terpinene %: N/A
    Total Nerolidol %: N/A
    Total Ocimene %: N/A
    α-Pinene %: N/A
    β-Pinene %: N/A

Genetic Information

View this strain on the Phylotree
Percent Heterozygosity: 1.52
Download VCF file: Here
Download FastQ Files: Read 1 Read 2
Download BAM file: BAM index
Download Annotated Variants: ANNOTATED VCF index
Plant Type: Type III

Bt/Bd ALLELE COVERAGE

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CBCAS COVERAGE


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Y-RATIO DISTRIBUTION


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VARIANTS (THCAS, CBDAS, and CBCAS)

Gene HGVS.c HGVS.p Annotation Annotation Impact Contig Contig Pos Ref/Alt Var Freq
CBDASc.221C>Gp.Thr74Sermissense variantMODERATEcontig17722082447

IGV:Start|Jump

C/G

NGS:0.136

C90:0.057

0.136
CBDASc.1420A>Cp.Lys474Glnmissense variantMODERATEcontig17722083646

IGV:Start|Jump

A/C

NGS:0.132

C90:0.813

0.132



VARIANTS (SELECT GENES OF INTEREST)

Gene HGVS.c HGVS.p Annotation Annotation Impact Contig Contig Pos Ref/Alt Var Freq
PKSG-4a

UNIPROT

c.493G>Ap.Gly165Sermissense variantMODERATEcontig7001937904

IGV:Start|Jump

G/A

NGS:0.103

C90:0.000

0.103
PKSG-4a

UNIPROT

c.1191_1193delTTAp.Tyr398deldisruptive inframe deletionMODERATEcontig7001938600

IGV:Start|Jump

AATT/A

NGS:0.167

C90:0.000

0.167
PKSG-2a

UNIPROT

c.67T>Ap.Phe23Ilemissense variantMODERATEcontig7001945567

IGV:Start|Jump

A/T

NGS:0.825

C90:0.904

0.825
PKSG-2a

UNIPROT

c.31A>Tp.Thr11Sermissense variantMODERATEcontig7001945603

IGV:Start|Jump

T/A

NGS:0.763

C90:0.876

0.763
PKSG-2b

UNIPROT

c.1117A>Gp.Ile373Valmissense variantMODERATEcontig7001950521

IGV:Start|Jump

T/C

NGS:0.807

C90:0.981

0.807
PKSG-2b

UNIPROT

c.774G>Ap.Met258Ilemissense variantMODERATEcontig7001950864

IGV:Start|Jump

C/T

NGS:0.366

C90:0.947

0.366
PKSG-2b

UNIPROT

c.31A>Tp.Thr11Sermissense variantMODERATEcontig7001951851

IGV:Start|Jump

T/A

NGS:0.844

C90:0.880

0.844
PKSG-4b

UNIPROT

c.496A>Gp.Lys166Glumissense variantMODERATEcontig7002721177

IGV:Start|Jump

T/C

NGS:0.651

C90:0.684

0.651
PKSG-4b

UNIPROT

c.489delTp.Phe163fsframeshift variantHIGHcontig7002721183

IGV:Start|Jump

CA/C

NGS:0.792

C90:0.761

0.792
PKSG-4b

UNIPROT

c.485A>Gp.Lys162Argmissense variantMODERATEcontig7002721188

IGV:Start|Jump

T/C

NGS:0.643

C90:0.301

0.643
PKSG-4b

UNIPROT

c.431T>Gp.Val144Glymissense variantMODERATEcontig7002721242

IGV:Start|Jump

A/C

NGS:0.575

C90:0.679

0.575
PKSG-4b

UNIPROT

c.419A>Gp.Asp140Glymissense variantMODERATEcontig7002721254

IGV:Start|Jump

T/C

NGS:0.430

C90:0.440

0.43
PKSG-4b

UNIPROT

c.352_355delACAGp.Thr118fsframeshift variantHIGHcontig7002721317

IGV:Start|Jump

CCTGT/C

NGS:0.529

C90:0.000

0.529
PKSG-4b

UNIPROT

c.324A>Cp.Glu108Aspmissense variantMODERATEcontig7002721349

IGV:Start|Jump

T/G

NGS:0.094

C90:0.000

0.094
PKSG-4b

UNIPROT

c.323A>Gp.Glu108Glymissense variantMODERATEcontig7002721350

IGV:Start|Jump

T/C

NGS:0.469

C90:0.000

0.469
DXR-2

UNIPROT

c.1319T>Cp.Ile440Thrmissense variantMODERATEcontig380285250

IGV:Start|Jump

A/G

NGS:0.480

C90:0.000

0.48
FAD2-2

UNIPROT

c.47_57delTGAATCATACTp.Leu16fsframeshift variantHIGHcontig831803311

IGV:Start|Jump

GAGTATGATTCA/G

NGS:0.018

C90:0.000

0.018
HDS-2

UNIPROT

c.82_85delGTAAp.Val28fsframeshift variantHIGHcontig951989748

IGV:Start|Jump

CGTAACCGGAACT/CCCGGAACT

NGS:0.002

C90:0.000

0.002
HDS-2

UNIPROT

c.82_93delGTAACCGGAACTp.Val28_Thr31delconservative inframe deletionMODERATEcontig951989748

IGV:Start|Jump

CGTAACCGGAACT/C

NGS:0.805

C90:0.000

0.805
HDS-2

UNIPROT

c.127T>Gp.Ser43Alamissense variantMODERATEcontig951989794

IGV:Start|Jump

T/G

NGS:0.721

C90:0.000

0.721


NEAREST GENETIC RELATIVES TO Cherry Blossom:
# Relative Genetic Distance
1 RSP11320-Cherry Blossom 5.48
2 RSP11270-Unknown- Cherry Wine - 003 5.68
3 RSP11314-Cherry Blossom 5.85
4 RSP11308-Cherry Blossom 6.23
5 RSP11335-Cherry Blossom 6.32
6 RSP11334-Cherry Blossom 6.64
7 RSP11268-Unknown- Cherry Wine - 001 6.78
8 RSP11327-Cherry Blossom 6.8
9 RSP11319-Cherry Blossom 6.86
10 RSP11269-Unknown- Cherry Wine - 002 6.9
11 RSP11332-Cherry Blossom 7.01
12 RSP11312-Cherry Blossom 7.42
13 RSP11274-Cherry Blossom 7.47
14 RSP11300-Cherry Blossom 7.51
15 RSP11316-Cherry Blossom 7.55
16 RSP11272-Unknown- Cherry Wine - 005 7.61
17 RSP11271-Unknown- Cherry Wine - 004 7.73
18 RSP11310-Cherry Blossom 7.84
19 RSP11321-Cherry Blossom 7.99
20 RSP11304-Cherry Blossom 8.08
NEAREST GENETIC RELATIVES TO BASE TREE:
# Relative Genetic Distance
1 RSP11133-Cbot-2019-005 9.06
2 RSP11142-Cherry 10.28
3 RSP10684-Blueberry Cheesecake 10.71
4 RSP11014-Durban Poison 10.96
5 RSP11143-Cherry 10.99
6 RSP10105-QUEEN JESUS 11.13
7 RSP11000-Liberty Haze 11.29
8 RSP10997-Kimbo Slice 11.38
9 RSP10755-Recon 11.39
10 RSP11129-Cbot-2019-001 11.71
11 RSP11132-Cbot-2019-004 11.73
12 RSP10988-The Gift 11.8
13 RSP10672-Blueberry Cheesecake 11.91
14 RSP11111-RKM-2018-019 11.93
15 RSP10653-Jiangji 12.09
16 RSP10989-UP Sunrise 12.11
17 RSP10659-Tisza 12.29
18 RSP11112-RKM-2018-020 12.38
19 RSP11096-RKM-2018-005 12.5
20 RSP11051-KYRG-11 12.57
NEAREST GENETIC RELATIVES IN PHYLOS DATASET:
Phylos Strain Number of Overlapping SNPs Concordance
SRR4448735 65 38

Blockchain Registration Information:

Transaction ID: 6beee48f523b0f492b28d6a40867e5f432fcac5df6d3697595230956f91b4d2e
Stamping Certificate: PDF
SHASUM Hash: b882f74ff76e573c01b9c8e868b21f8241628e090d53034e885a4ee1569192a0