JABBA'S STASH

RSP11348
StrainSEEK Cannabis Certification Report

Accession Date:

October 23, 2019

Summary

JABBA'S STASH (RSP11348/Happy Valley) is a genetic Type I plant and its genetics appear rare. The sample's closest relative in the database is The Gift (RSP10988/Manoa Botanicals) and it is a potential sibling. The heterozygosity rate is 1.19% which is higher than average (67.3 percentile).

General Information

Strain: JABBA'S STASH
RSP ID: RSP11348
Grower: Happy Valley
Accession Date: October 23, 2019
Gender: Female
Strain Seek Version: V2


What does this visualization mean?

Chemical Information*


Cannabinoid and Terpenoid information provided by our Partner Labs.

CANNABINOIDS

THC + THCA %: N/A
CBD + CBDA %: N/A
THCV + THCVA %: N/A
CBC + CBCA %: N/A
CBG + CBGA %: N/A
CBN + CBNA %: N/A

TERPENOIDS

  • α-Bisabolol %: N/A
    Borneol %: N/A
    Camphene %: N/A
    Carene %: N/A
    Caryophyllene oxide %: N/A
    β-Carophyllene %: N/A
    Fenchol %: N/A
    Geraniol %: N/A
    α-Humulene %: N/A
    Limonene %: N/A
    Linalool %: N/A
  • Myrcene %: N/A
    α-Phellandrene %: N/A
    Terpinolene %: N/A
    α-Terpineol %: N/A
    α-Terpinene %: N/A
    γ-Terpinene %: N/A
    Total Nerolidol %: N/A
    Total Ocimene %: N/A
    α-Pinene %: N/A
    β-Pinene %: N/A

Genetic Information

View this strain on the Phylotree
Percent Heterozygosity: 1.19
Download VCF file: Here
Download FastQ Files: Read 1 Read 2
Download BAM file: BAM index
Download Annotated Variants: ANNOTATED VCF index
Plant Type: Type I

Bt/Bd ALLELE COVERAGE

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CBCAS COVERAGE


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Y-RATIO DISTRIBUTION


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VARIANTS (THCAS, CBDAS, and CBCAS)

Gene HGVS.c HGVS.p Annotation Annotation Impact Contig Contig Pos Ref/Alt Var Freq
THCASc.998C>Gp.Pro333Argmissense variantMODERATEcontig7414416830

IGV:Start|Jump

G/C

NGS:0.182

C90:0.000

0.182
THCASc.749C>Ap.Ala250Aspmissense variantMODERATEcontig7414417079

IGV:Start|Jump

G/T

NGS:0.127

C90:0.632

0.127



VARIANTS (SELECT GENES OF INTEREST)

Gene HGVS.c HGVS.p Annotation Annotation Impact Contig Contig Pos Ref/Alt Var Freq
PKSG-2a

UNIPROT

c.241G>Ap.Val81Metmissense variantMODERATEcontig7001945149

IGV:Start|Jump

C/T

NGS:0.136

C90:0.000

0.136
PKSG-2a

UNIPROT

c.240T>Gp.Asp80Glumissense variantMODERATEcontig7001945150

IGV:Start|Jump

A/C

NGS:0.136

C90:0.000

0.136
PKSG-2a

UNIPROT

c.230T>Cp.Val77Alamissense variantMODERATEcontig7001945160

IGV:Start|Jump

A/G

NGS:0.114

C90:0.000

0.114
PKSG-2a

UNIPROT

c.224A>Gp.Lys75Argmissense variantMODERATEcontig7001945166

IGV:Start|Jump

T/C

NGS:0.143

C90:0.962

0.143
PKSG-2a

UNIPROT

c.188T>Gp.Ile63Sermissense variantMODERATEcontig7001945202

IGV:Start|Jump

A/C

NGS:0.101

C90:0.000

0.101
PKSG-2a

UNIPROT

c.188T>Ap.Ile63Asnmissense variantMODERATEcontig7001945202

IGV:Start|Jump

A/T

NGS:0.061

C90:0.000

0.061
PKSG-2a

UNIPROT

c.187A>Tp.Ile63Phemissense variantMODERATEcontig7001945203

IGV:Start|Jump

T/A

NGS:0.101

C90:0.000

0.101
PKSG-2a

UNIPROT

c.67T>Ap.Phe23Ilemissense variantMODERATEcontig7001945567

IGV:Start|Jump

A/T

NGS:0.825

C90:0.904

0.825
PKSG-2a

UNIPROT

c.31A>Tp.Thr11Sermissense variantMODERATEcontig7001945603

IGV:Start|Jump

T/A

NGS:0.763

C90:0.876

0.763
PKSG-2b

UNIPROT

c.1152T>Ap.Asn384Lysmissense variantMODERATEcontig7001950486

IGV:Start|Jump

A/T

NGS:0.715

C90:0.895

0.715
PKSG-2b

UNIPROT

c.1132C>Gp.Leu378Valmissense variantMODERATEcontig7001950506

IGV:Start|Jump

G/C

NGS:0.717

C90:0.000

0.717
PKSG-2b

UNIPROT

c.1117A>Gp.Ile373Valmissense variantMODERATEcontig7001950521

IGV:Start|Jump

T/C

NGS:0.807

C90:0.981

0.807
PKSG-2b

UNIPROT

c.774G>Ap.Met258Ilemissense variantMODERATEcontig7001950864

IGV:Start|Jump

C/T

NGS:0.366

C90:0.947

0.366
PKSG-2b

UNIPROT

c.31A>Tp.Thr11Sermissense variantMODERATEcontig7001951851

IGV:Start|Jump

T/A

NGS:0.844

C90:0.880

0.844
PKSG-4b

UNIPROT

c.496A>Gp.Lys166Glumissense variantMODERATEcontig7002721177

IGV:Start|Jump

T/C

NGS:0.651

C90:0.684

0.651
PKSG-4b

UNIPROT

c.489delTp.Phe163fsframeshift variantHIGHcontig7002721183

IGV:Start|Jump

CA/C

NGS:0.792

C90:0.761

0.792
PKSG-4b

UNIPROT

c.485A>Gp.Lys162Argmissense variantMODERATEcontig7002721188

IGV:Start|Jump

T/C

NGS:0.643

C90:0.301

0.643
PKSG-4b

UNIPROT

c.431T>Gp.Val144Glymissense variantMODERATEcontig7002721242

IGV:Start|Jump

A/C

NGS:0.575

C90:0.679

0.575
PKSG-4b

UNIPROT

c.419A>Gp.Asp140Glymissense variantMODERATEcontig7002721254

IGV:Start|Jump

T/C

NGS:0.430

C90:0.440

0.43
PKSG-4b

UNIPROT

c.352_355delACAGp.Thr118fsframeshift variantHIGHcontig7002721317

IGV:Start|Jump

CCTGT/C

NGS:0.529

C90:0.000

0.529
PKSG-4b

UNIPROT

c.323A>Gp.Glu108Glymissense variantMODERATEcontig7002721350

IGV:Start|Jump

T/C

NGS:0.469

C90:0.000

0.469
DXR-2

UNIPROT

c.1319T>Cp.Ile440Thrmissense variantMODERATEcontig380285250

IGV:Start|Jump

A/G

NGS:0.480

C90:0.000

0.48
DXR-2

UNIPROT

c.431C>Gp.Ala144Glymissense variantMODERATEcontig380287760

IGV:Start|Jump

G/C

NGS:0.182

C90:0.550

0.182
aPT4

UNIPROT

c.16G>Ap.Val6Ilemissense variantMODERATEcontig1212828672

IGV:Start|Jump

G/A

NGS:0.158

C90:0.000

0.158
aPT4

UNIPROT

c.35A>Cp.Gln12Promissense variantMODERATEcontig1212828691

IGV:Start|Jump

A/C

NGS:0.075

C90:0.000

0.075
aPT4

UNIPROT

c.97T>Cp.Tyr33Hismissense variantMODERATEcontig1212828753

IGV:Start|Jump

T/C

NGS:0.439

C90:0.000

0.439
aPT4

UNIPROT

c.153A>Cp.Lys51Asnmissense variantMODERATEcontig1212828809

IGV:Start|Jump

A/C

NGS:0.375

C90:0.000

0.375
aPT4

UNIPROT

c.216A>Tp.Lys72Asnmissense variantMODERATEcontig1212828872

IGV:Start|Jump

A/T

NGS:0.075

C90:0.000

0.075
aPT4

UNIPROT

c.235_236delGTp.Val79fsframeshift variantHIGHcontig1212829030

IGV:Start|Jump

ATG/A

NGS:0.417

C90:0.000

0.417
aPT4

UNIPROT

c.238delTp.Ser80fsframeshift variantHIGHcontig1212829034

IGV:Start|Jump

AT/A

NGS:0.421

C90:0.000

0.421
aPT4

UNIPROT

c.302A>Gp.Asn101Sermissense variantMODERATEcontig1212829099

IGV:Start|Jump

A/G

NGS:0.349

C90:0.000

0.349
aPT4

UNIPROT

c.1168T>Cp.Tyr390Hismissense variantMODERATEcontig1212833503

IGV:Start|Jump

T/C

NGS:0.546

C90:0.000

0.546
aPT1

UNIPROT

c.406A>Gp.Ile136Valmissense variantMODERATEcontig1212839605

IGV:Start|Jump

A/G

NGS:0.579

C90:0.761

0.579
aPT1

UNIPROT

c.629C>Tp.Thr210Ilemissense variantMODERATEcontig1212840237

IGV:Start|Jump

C/T

NGS:0.561

C90:0.598

0.561
HDS-2

UNIPROT

c.82_93delGTAACCGGAACTp.Val28_Thr31delconservative inframe deletionMODERATEcontig951989748

IGV:Start|Jump

CGTAACCGGAACT/C

NGS:0.805

C90:0.000

0.805
HDS-2

UNIPROT

c.127T>Gp.Ser43Alamissense variantMODERATEcontig951989794

IGV:Start|Jump

T/G

NGS:0.721

C90:0.000

0.721


NEAREST GENETIC RELATIVES TO JABBA'S STASH:
# Relative Genetic Distance
1 RSP10988-The Gift 5.81
2 RSP11099-RKM-2018-008 5.84
3 RSP11344-Square Wave 5.98
4 RSP11265-Pure Power Plant 6.04
5 RSP11242-MENDO BREATH 6.06
6 RSP11126-RKM-2018-034 6.22
7 RSP11345-Golden Road 6.52
8 RSP11231-Gorilla Cookies 6.63
9 RSP11071-Sunday Driver 6.68
10 RSP10684-Blueberry Cheesecake 6.76
11 RSP11362-NSPM1 7.06
12 RSP11163-North Traveler 7.08
13 RSP10997-Kimbo Slice 7.09
14 RSP11011-Super Blue Dream 7.1
15 RSP11050-Hermaphrodite ResearchSample2 7.16
16 RSP11353-Rugburn OG 7.18
17 RSP11178-Harlox 7.24
18 RSP11072-SFVxTK 7.24
19 RSP10837-Skywalker OG 7.29
20 RSP11073-Pie Hoe 7.32
NEAREST GENETIC RELATIVES TO BASE TREE:
# Relative Genetic Distance
1 RSP10988-The Gift 5.82
2 RSP11126-RKM-2018-034 6.4
3 RSP10997-Kimbo Slice 6.89
4 RSP10684-Blueberry Cheesecake 6.94
5 RSP11050-Hermaphrodite ResearchSample2 7.14
6 RSP10837-Skywalker OG 7.35
7 RSP11096-RKM-2018-005 7.54
8 RSP11124-RKM-2018-032 7.63
9 RSP11073-Pie Hoe 7.64
10 RSP11125-RKM-2018-033 7.75
11 RSP11118-RKM-2018-026 7.79
12 RSP11111-RKM-2018-019 7.85
13 RSP10991-Golden Goat 2 7.99
14 RSP10105-QUEEN JESUS 8.06
15 RSP11038-Skunk 18 8.14
16 RSP11128-Kush Hemp E1 8.24
17 RSP11114-RKM-2018-022 8.45
18 RSP11033-Blue Dream 8.51
19 RSP11121-RKM-2018-029 8.56
20 RSP10551-Sour Raspberry 8.6
NEAREST GENETIC RELATIVES IN PHYLOS DATASET:
Phylos Strain Number of Overlapping SNPs Concordance
SRR8349262 62 42
NEAREST GENETIC RELATIVES IN LYNCH DATASET:
Nearest Lynch Strain Number of Overlapping SNPs Concordance
SRR3495266 6 6

Blockchain Registration Information:

Transaction ID: 2346207128a4788b64293eb994d952e204e92b5c566e3b2900eade7cfec22c89
Stamping Certificate: PDF
SHASUM Hash: 19183747fd625cc650cf8536c6e95ee85aeb638f0f3763dd53b730df227a668a