CANNATONIC

RSP11349
StrainSEEK Cannabis Certification Report

Accession Date:

October 23, 2019

Summary

CANNATONIC (RSP11349/Happy Valley) is a genetic Type I plant and its genetics appear rare. The sample's closest relative in the database is Queen Dream CBG (RSP11283/Yabba Cannaba) and it is a potential sibling. The heterozygosity rate is 1.04% which is average (40.4 percentile).

General Information

Strain: CANNATONIC
RSP ID: RSP11349
Grower: Happy Valley
Accession Date: October 23, 2019
Gender: Female
Strain Seek Version: V2


What does this visualization mean?

Chemical Information*


Cannabinoid and Terpenoid information provided by our Partner Labs.

CANNABINOIDS

THC + THCA %: N/A
CBD + CBDA %: N/A
THCV + THCVA %: N/A
CBC + CBCA %: N/A
CBG + CBGA %: N/A
CBN + CBNA %: N/A

TERPENOIDS

  • α-Bisabolol %: N/A
    Borneol %: N/A
    Camphene %: N/A
    Carene %: N/A
    Caryophyllene oxide %: N/A
    β-Carophyllene %: N/A
    Fenchol %: N/A
    Geraniol %: N/A
    α-Humulene %: N/A
    Limonene %: N/A
    Linalool %: N/A
  • Myrcene %: N/A
    α-Phellandrene %: N/A
    Terpinolene %: N/A
    α-Terpineol %: N/A
    α-Terpinene %: N/A
    γ-Terpinene %: N/A
    Total Nerolidol %: N/A
    Total Ocimene %: N/A
    α-Pinene %: N/A
    β-Pinene %: N/A

Genetic Information

View this strain on the Phylotree
Percent Heterozygosity: 1.04
Download VCF file: Here
Download FastQ Files: Read 1 Read 2
Download BAM file: BAM index
Download Annotated Variants: ANNOTATED VCF index
Plant Type: Type I

Bt/Bd ALLELE COVERAGE

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CBCAS COVERAGE


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Y-RATIO DISTRIBUTION


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VARIANTS (THCAS, CBDAS, and CBCAS)

Gene HGVS.c HGVS.p Annotation Annotation Impact Contig Contig Pos Ref/Alt Var Freq
THCASc.373G>Cp.Val125Leumissense variantMODERATEcontig7414417455

IGV:Start|Jump

C/G

NGS:0.050

C90:0.000

0.05



VARIANTS (SELECT GENES OF INTEREST)

Gene HGVS.c HGVS.p Annotation Annotation Impact Contig Contig Pos Ref/Alt Var Freq
PKSG-4a

UNIPROT

c.617A>Gp.Tyr206Cysmissense variantMODERATEcontig7001938028

IGV:Start|Jump

A/G

NGS:0.075

C90:0.000

0.075
PKSG-4a

UNIPROT

c.626_628delATAp.Asn209deldisruptive inframe deletionMODERATEcontig7001938032

IGV:Start|Jump

CAAT/C

NGS:0.075

C90:0.000

0.075
PKSG-4a

UNIPROT

c.1191_1193delTTAp.Tyr398deldisruptive inframe deletionMODERATEcontig7001938600

IGV:Start|Jump

AATT/A

NGS:0.167

C90:0.000

0.167
PKSG-2a

UNIPROT

c.1117A>Gp.Ile373Valmissense variantMODERATEcontig7001944273

IGV:Start|Jump

T/C

NGS:0.101

C90:0.967

0.101
PKSG-2a

UNIPROT

c.67T>Ap.Phe23Ilemissense variantMODERATEcontig7001945567

IGV:Start|Jump

A/T

NGS:0.825

C90:0.904

0.825
PKSG-2a

UNIPROT

c.31A>Tp.Thr11Sermissense variantMODERATEcontig7001945603

IGV:Start|Jump

T/A

NGS:0.763

C90:0.876

0.763
PKSG-2b

UNIPROT

c.1152T>Ap.Asn384Lysmissense variantMODERATEcontig7001950486

IGV:Start|Jump

A/T

NGS:0.715

C90:0.895

0.715
PKSG-2b

UNIPROT

c.1132C>Gp.Leu378Valmissense variantMODERATEcontig7001950506

IGV:Start|Jump

G/C

NGS:0.717

C90:0.000

0.717
PKSG-2b

UNIPROT

c.1117A>Gp.Ile373Valmissense variantMODERATEcontig7001950521

IGV:Start|Jump

T/C

NGS:0.807

C90:0.981

0.807
PKSG-2b

UNIPROT

c.948T>Gp.Asp316Glumissense variantMODERATEcontig7001950690

IGV:Start|Jump

A/C

NGS:0.456

C90:0.000

0.456
PKSG-2b

UNIPROT

c.945T>Gp.Ser315Argmissense variantMODERATEcontig7001950693

IGV:Start|Jump

A/C

NGS:0.454

C90:0.000

0.454
PKSG-2b

UNIPROT

c.944G>Ap.Ser315Asnmissense variantMODERATEcontig7001950694

IGV:Start|Jump

C/T

NGS:0.445

C90:0.000

0.445
PKSG-2b

UNIPROT

c.934C>Gp.His312Aspmissense variantMODERATEcontig7001950704

IGV:Start|Jump

G/C

NGS:0.410

C90:0.000

0.41
PKSG-2b

UNIPROT

c.31A>Tp.Thr11Sermissense variantMODERATEcontig7001951851

IGV:Start|Jump

T/A

NGS:0.844

C90:0.880

0.844
PKSG-2b

UNIPROT

c.-2_1dupATAstart lost&conservative inframe insertionHIGHcontig7001951880

IGV:Start|Jump

A/ATAT

NGS:0.410

C90:0.000

0.41
PKSG-4b

UNIPROT

c.496A>Gp.Lys166Glumissense variantMODERATEcontig7002721177

IGV:Start|Jump

T/C

NGS:0.651

C90:0.684

0.651
PKSG-4b

UNIPROT

c.489delTp.Phe163fsframeshift variantHIGHcontig7002721183

IGV:Start|Jump

CA/C

NGS:0.792

C90:0.761

0.792
PKSG-4b

UNIPROT

c.485A>Gp.Lys162Argmissense variantMODERATEcontig7002721188

IGV:Start|Jump

T/C

NGS:0.643

C90:0.301

0.643
PKSG-4b

UNIPROT

c.431T>Gp.Val144Glymissense variantMODERATEcontig7002721242

IGV:Start|Jump

A/C

NGS:0.575

C90:0.679

0.575
PKSG-4b

UNIPROT

c.419A>Gp.Asp140Glymissense variantMODERATEcontig7002721254

IGV:Start|Jump

T/C

NGS:0.430

C90:0.440

0.43
PKSG-4b

UNIPROT

c.352_355delACAGp.Thr118fsframeshift variantHIGHcontig7002721317

IGV:Start|Jump

CCTGT/C

NGS:0.529

C90:0.000

0.529
PKSG-4b

UNIPROT

c.323A>Gp.Glu108Glymissense variantMODERATEcontig7002721350

IGV:Start|Jump

T/C

NGS:0.469

C90:0.000

0.469
DXR-2

UNIPROT

c.1319T>Cp.Ile440Thrmissense variantMODERATEcontig380285250

IGV:Start|Jump

A/G

NGS:0.480

C90:0.000

0.48
aPT4

UNIPROT

c.16G>Ap.Val6Ilemissense variantMODERATEcontig1212828672

IGV:Start|Jump

G/A

NGS:0.158

C90:0.000

0.158
aPT4

UNIPROT

c.97T>Cp.Tyr33Hismissense variantMODERATEcontig1212828753

IGV:Start|Jump

T/C

NGS:0.439

C90:0.000

0.439
aPT4

UNIPROT

c.153A>Cp.Lys51Asnmissense variantMODERATEcontig1212828809

IGV:Start|Jump

A/C

NGS:0.375

C90:0.000

0.375
aPT4

UNIPROT

c.235_236delGTp.Val79fsframeshift variantHIGHcontig1212829030

IGV:Start|Jump

ATG/A

NGS:0.417

C90:0.000

0.417
aPT4

UNIPROT

c.238delTp.Ser80fsframeshift variantHIGHcontig1212829034

IGV:Start|Jump

AT/A

NGS:0.421

C90:0.000

0.421
aPT4

UNIPROT

c.302A>Gp.Asn101Sermissense variantMODERATEcontig1212829099

IGV:Start|Jump

A/G

NGS:0.349

C90:0.000

0.349
aPT4

UNIPROT

c.1168T>Cp.Tyr390Hismissense variantMODERATEcontig1212833503

IGV:Start|Jump

T/C

NGS:0.546

C90:0.000

0.546
aPT1

UNIPROT

c.629C>Tp.Thr210Ilemissense variantMODERATEcontig1212840237

IGV:Start|Jump

C/T

NGS:0.561

C90:0.598

0.561
HDS-2

UNIPROT

c.82_93delGTAACCGGAACTp.Val28_Thr31delconservative inframe deletionMODERATEcontig951989748

IGV:Start|Jump

CGTAACCGGAACT/C

NGS:0.805

C90:0.000

0.805
HDS-2

UNIPROT

c.127T>Gp.Ser43Alamissense variantMODERATEcontig951989794

IGV:Start|Jump

T/G

NGS:0.721

C90:0.000

0.721


NEAREST GENETIC RELATIVES TO CANNATONIC:
# Relative Genetic Distance
1 RSP11283-Queen Dream CBG 5.66
2 RSP11350-101st AIRBORN CBD 5.9
3 RSP11174-AVIDEKEL 2 0 6.06
4 RSP11131-Cbot-2019-003 6.08
5 RSP11279-Queen Dream CBG 6.25
6 RSP11292-Hot Blonde 6.26
7 RSP11129-Cbot-2019-001 6.36
8 RSP11000-Liberty Haze 6.44
9 RSP10946-Liberty Haze 6.55
10 RSP11184-Domnesia 6.79
11 RSP11243-Doug's Varin 6.9
12 RSP11296-Queen Dream CBG 7.02
13 RSP11297-Queen Dream CBG 7.06
14 RSP11295-Queen Dream CBG 7.07
15 RSP11361-FL30 7.09
16 RSP10684-Blueberry Cheesecake 7.09
17 RSP11276-Queen Dream CBG 7.1
18 RSP11133-Cbot-2019-005 7.25
19 RSP10938-Avidekel 7.26
20 RSP11275-Queen Dream CBG 7.27
NEAREST GENETIC RELATIVES TO BASE TREE:
# Relative Genetic Distance
1 RSP11129-Cbot-2019-001 6.54
2 RSP11000-Liberty Haze 6.78
3 RSP10684-Blueberry Cheesecake 7.03
4 RSP11133-Cbot-2019-005 7.54
5 RSP10672-Blueberry Cheesecake 8.1
6 RSP11014-Durban Poison 8.34
7 RSP11112-RKM-2018-020 8.5
8 RSP10989-UP Sunrise 8.66
9 RSP10991-Golden Goat 2 8.77
10 RSP11132-Cbot-2019-004 8.77
11 RSP10680-Blueberry Cheesecake 8.89
12 RSP11128-Kush Hemp E1 8.94
13 RSP11142-Cherry 8.99
14 RSP11134-Cbot-2019-006 9.02
15 RSP10105-QUEEN JESUS 9.09
16 RSP11123-RKM-2018-031 9.12
17 RSP11048-Gold Cracker 9.3
18 RSP11119-RKM-2018-027 9.3
19 RSP10755-Recon 9.33
20 RSP11125-RKM-2018-033 9.33
MOST GENETICALLY DISTANT STRAINS FROM CANNATONIC:
# Strain Genetic Distance
1 RSP11323-Cherry Blossom 13.67
2 RSP11213-80E 12.96
3 RSP11212-80E 12.78
4 RSP11211-80E 12.46
5 RSP11306-Cherry Blossom 12.35
6 RSP11317-Cherry Blossom 12.18
7 RSP11075-JL yellow 12.08
8 RSP11303-Cherry Blossom CBG 12.08
9 RSP11242-MENDO BREATH 12.01
10 RSP10940-OR 11.91
11 RSP11202-Carmagnola 11.91
12 RSP11271-Unknown- Cherry Wine - 004 11.87
13 RSP10977-Carmagnola 11.85
14 RSP10890-Feral 11.82
15 RSP11037-Carmagnola 11.75
16 RSP10980-Carmagnola 11.74
17 RSP10241-Monoica 11.73
18 RSP11214-JL 3rd Gen Mother 11.7
19 RSP10979-Carmagnola 11.68
20 RSP11126-RKM-2018-034 11.68
NEAREST GENETIC RELATIVES IN PHYLOS DATASET:
Phylos Strain Number of Overlapping SNPs Concordance
SRR8346935 66 43
NEAREST GENETIC RELATIVES IN LYNCH DATASET:
Nearest Lynch Strain Number of Overlapping SNPs Concordance
SRR3495252 6 6

Blockchain Registration Information:

Transaction ID: 163c00f12f291528b420ec875afe853a8f846f6caddb1bf13e92110b74f1320c
Stamping Certificate: PDF
SHASUM Hash: 452cde813a8c64d75a3d46159008a73c15511506a72d152dab977700e8d3f070