Kimbo Slice

RSP 10997

Grower: DigiPath Labs

General Information

Sample Name
F20161209-03-7
Accession Date
August 28, 2017
Reported Plant Sex
Female

The strain rarity visualization shows how distant the strain is from the other cultivars in the Kannapedia database. The y-axis represents genetic distance, getting farther as you go up. The width of the visualization at any position along the y-axis shows how many strains there are in the database at that genetic distance. So, a common strain will have a more bottom-heavy shape, while uncommon and rare cultivars will have a visualization that is generally shifted towards the top.

Rarity: Rare
Most Distant Most Similar

Chemical Information

Cannabinoid and terpenoid information provided by the grower.

Cannabinoids

THC + THCA
23.1%
CBD + CBDA
0.037%
THCV + THCVA
0.%
CBC + CBCA
0.%
CBG + CBGA
0.944%
CBN + CBNA
0.053%

Terpenoids

α-Bisabolol
0.001%
Borneol
n/a
Camphene
0.004%
Carene
0.052%
Caryophyllene oxide
0.%
β-Caryophyllene
0.026%
Fenchol
n/a
Geraniol
0.001%
α-Humulene
0.024%
Limonene
0.114%
Linalool
0.01%
Myrcene
0.103%
α-Phellandrene
n/a
Terpinolene
0.317%
α-Terpineol
n/a
α-Terpinene
0.023%
γ-Terpinene
0.486%
Total Nerolidol
0.003%
Total Ocimene
0.189%
α-Pinene
0.08%
β-Pinene
0.073%

Genetic Information

Plant Type
Type I

The bell curve in the heterozygosity visualization shows the distribution of heterozygosity levels for cannabis cultivars in the Kannapedia database. The green line shows where this particular strain fits within the distribution. Heterozygosity is associated with heterosis (aka hybrid vigor) but also leads to the production of more variable offspring. When plants have two genetically different parents, heterozygosity levels will be higher than if it has been inbred or backcrossed repeatedly.

Heterozygosity: 1.1%
Least Heterozygous Most Heterozygous

The ratio of reads mapped to Y-contigs to reads mapped to the whole Cannabis genome (Y-ratios) has been demonstrated to be strongly correlated with plant sex typing. This plot shows the distribution of Y-ratios for all samples in our database which were sequenced with the same method (panel or WGS) as this sample and where this sample falls in the distribution.

Y-Ratio Distribution: 0.0480
male female RSP10997

This chart represents the Illumina sequence coverage over the Bt/Bd allele. These are the three regions in the cannabis genome that impact THCA, CBDA, CBGA production. Coverage over the Active CBDAS gene is highly correlated with Type II and Type III plants as described by Etienne de Meijer. Coverage over the THCA gene is highly correlated with Type I and Type II plants but is anti-correlated with Type III plants. Type I plants require coverage over the inactive CBDA loci and no coverage over the Active CBDA gene. Lack of coverage over the Active CBDA and Active THCA allele are presumed to be Type IV plants (CBGA dominant). While deletions of entire THCAS and CBDAS genes are the most common Bt:Bd alleles observed, it is possible to have plants with these genes where functional expression of the enzyme is disrupted by deactivating point mutations (Kojoma et al. 2006).

Bt/Bd Allele Coverage

This chart represents the Illumina sequence coverage over the CBCA synthase gene.

CBCAS Coverage

Variants (THCAS, CBDAS, and CBCAS)

THCAS c.1229G>A p.Gly410Glu missense variant moderate contig741 4416599

IGV: Start, Jump

C/T
NGS:
0.039
C90:
0.000
THCAS c.998C>G p.Pro333Arg missense variant moderate contig741 4416830

IGV: Start, Jump

G/C
NGS:
0.182
C90:
0.000

Variants (Select Genes of Interest)

PKSG-2a

UniProt

c.67T>A p.Phe23Ile missense variant moderate contig700 1945567

IGV: Start, Jump

A/T
NGS:
0.825
C90:
0.904
PKSG-2a

UniProt

c.31A>T p.Thr11Ser missense variant moderate contig700 1945603

IGV: Start, Jump

T/A
NGS:
0.763
C90:
0.876
PKSG-2b

UniProt

c.31A>T p.Thr11Ser missense variant moderate contig700 1951851

IGV: Start, Jump

T/A
NGS:
0.844
C90:
0.880
PKSG-4b

UniProt

c.535_545delATTGGAGTGGG p.Ile179fs frameshift variant high contig700 2721127

IGV: Start, Jump

CCCCACTCCAAT/C
NGS:
0.105
C90:
0.000
PKSG-4b

UniProt

c.523C>T p.His175Tyr missense variant moderate contig700 2721150

IGV: Start, Jump

G/A
NGS:
0.112
C90:
0.325
PKSG-4b

UniProt

c.489delT p.Phe163fs frameshift variant high contig700 2721183

IGV: Start, Jump

CA/C
NGS:
0.792
C90:
0.761
aPT1

UniProt

c.160A>C p.Thr54Pro missense variant moderate contig121 2835867

IGV: Start, Jump

A/C
NGS:
0.086
C90:
0.048
aPT1

UniProt

c.727G>T p.Glu243* stop gained high contig121 2841362

IGV: Start, Jump

G/T
NGS:
0.127
C90:
0.100
aPT1

UniProt

c.864C>G p.Asn288Lys missense variant moderate contig121 2842407

IGV: Start, Jump

C/G
NGS:
0.075
C90:
0.062
HDS-2

UniProt

c.82_93delGTAACCGGAACT p.Val28_Thr31del conservative inframe deletion moderate contig95 1989748

IGV: Start, Jump

CGTAACCGGAACT/C
NGS:
0.805
C90:
0.000
HDS-2

UniProt

c.127T>G p.Ser43Ala missense variant moderate contig95 1989794

IGV: Start, Jump

T/G
NGS:
0.721
C90:
0.000

Nearest genetic relatives (All Samples)

0 0.067 0.133 0.200 0.267
clone distance sibling distance more distant
  1. 0.177 The Gift (RSP10988)
  2. 0.194 RKM-2018-008 (RSP11099)
  3. 0.223 Pure Power Plant (RSP11265)
  4. 0.230 Serious Happiness (RSP10763)
  5. 0.232 RKM-2018-013 (RSP11104)
  6. 0.236 JABBA S STASH (RSP11348)
  7. 0.237 Pie Hoe (RSP11073)
  8. 0.238 Sunday Driver (RSP11071)
  9. 0.239 JL 4th Gen 7 (RSP11153)
  10. 0.242 Super Blue Dream (RSP11011)
  11. 0.242 Casco Kush (RSP11167)
  12. 0.243 SFVxTK (RSP11072)
  13. 0.244 Recon (RSP10755)
  14. 0.245 Blue Dream (RSP11007)
  15. 0.249 Doug s Varin (RSP11243)
  16. 0.249 Skywalker OG (RSP10837)
  17. 0.250 KYRG-151 (RSP11052)
  18. 0.250 RKM-2018-032 (RSP11124)
  19. 0.250 RKM-2018-021 (RSP11113)
  20. 0.250 RKM-2018-017 (RSP11109)

Nearest genetic relatives (Base Tree)

0 0.075 0.150 0.225 0.300
clone distance sibling distance more distant
  1. 0.174 The Gift (RSP10988)
  2. 0.236 Recon (RSP10755)
  3. 0.242 Skywalker OG (RSP10837)
  4. 0.243 Pie Hoe (RSP11073)
  5. 0.246 RKM-2018-032 (RSP11124)
  6. 0.247 Liberty Haze (RSP11000)
  7. 0.253 Blueberry Cheesecake (RSP10684)
  8. 0.258 RKM-2018-034 (RSP11126)
  9. 0.261 Blueberry Cheesecake (RSP10680)
  10. 0.262 RKM-2018-026 (RSP11118)
  11. 0.269 Gold Cracker (RSP11048)
  12. 0.270 RKM-2018-029 (RSP11121)
  13. 0.270 RKM-2018-033 (RSP11125)
  14. 0.271 Golden Goat 2 (RSP10991)
  15. 0.272 KYRG-11 (RSP11051)
  16. 0.274 Skunk 18 (RSP11038)
  17. 0.274 CST (RSP11002)
  18. 0.276 Hermaphrodite ResearchSample2 (RSP11050)
  19. 0.278 RKM-2018-005 (RSP11096)
  20. 0.279 Jiangji (RSP10653)

Most genetically distant strains (All Samples)

0 0.117 0.233 0.350 0.467
clone distance sibling distance more distant
  1. 0.458 Cherry Blossom (RSP11323)
  2. 0.455 Cherry Blossom (RSP11318)
  3. 0.426 Unknown- Cherry Wine - 001 (RSP11268)
  4. 0.421 Unknown- Cherry Wine - 002 (RSP11269)
  5. 0.408 Cherry Blossom (RSP11328)
  6. 0.404 Cherry Blossom (RSP11274)
  7. 0.396 Cherry Blossom (RSP11302)
  8. 0.392 Cherry Blossom (RSP11334)
  9. 0.391 Unknown- Cherry Wine - 003 (RSP11270)
  10. 0.390 Cherry Blossom (RSP11300)
  11. 0.389 Cherry Blossom (RSP11312)
  12. 0.389 Cherry Blossom (RSP11333)
  13. 0.387 Cherry Blossom (RSP11301)
  14. 0.387 Cherry Blossom (RSP11309)
  15. 0.383 Cherry Blossom (RSP11298)
  16. 0.381 Avidekel (RSP10938)
  17. 0.378 Cherry Blossom (RSP11335)
  18. 0.377 Cherry Blossom (RSP11321)
  19. 0.377 Cherry Blossom (RSP11308)
  20. 0.376 Cherry Blossom (RSP11311)

Most genetically distant strains (Base Tree)

0 0.092 0.183 0.275 0.367
clone distance sibling distance more distant
  1. 0.362 Cbot-2019-005 (RSP11133)
  2. 0.360 Cherry (RSP11142)
  3. 0.352 Blueberry Cheesecake (RSP10672)
  4. 0.341 Cherry (RSP11143)
  5. 0.340 RKM-2018-022 (RSP11114)
  6. 0.333 Cbot-2019-004 (RSP11132)
  7. 0.331 RKM-2018-028 (RSP11120)
  8. 0.329 RKM-2018-006 (RSP11097)
  9. 0.327 RKM-2018-002 (RSP11093)
  10. 0.323 JL yellow (RSP11075)
  11. 0.321 Black Beauty (RSP11035)
  12. 0.321 RKM-2018-023 (RSP11115)
  13. 0.319 Monoica (RSP10241)
  14. 0.317 RKM-2018-018 (RSP11110)
  15. 0.315 RKM-2018-019 (RSP11111)
  16. 0.313 RKM-2018-003 (RSP11094)
  17. 0.309 Kush Hemp E1 (RSP11128)
  18. 0.309 RKM-2018-009 (RSP11100)
  19. 0.308 Santhica27 (RSP11047)
  20. 0.308 UP Sunrise (RSP10989)

Nearest genetic relative in Phylos dataset

Phylos Strain SRR4448408
Overlapping SNPs:
111
Concordance:
68

Nearest genetic relative in Lynch dataset

Lynch Strain SRR3495192
Overlapping SNPs:
6
Concordance:
5

Blockchain Registration Information

Transaction ID
7afa2f444d39280afefacfe1fc4d66c41a3bbc7594e0c6145790aaebc0ef1eae
Stamping Certificate
Download PDF (842.3 KB)
SHASUM Hash
6d27bad6db7d908faa240eb9daf4295fa6182fe80fabc594cb44b0d4ad25a1ed
QR code for RSP10997

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