Blue Dream

RSP 11007

Grower: Silver Sage Wellness

General Information

Sample Name
F20160823-05-2_01FEB2017
Accession Date
September 17, 2017
Reported Plant Sex
not reported

The strain rarity visualization shows how distant the strain is from the other cultivars in the Kannapedia database. The y-axis represents genetic distance, getting farther as you go up. The width of the visualization at any position along the y-axis shows how many strains there are in the database at that genetic distance. So, a common strain will have a more bottom-heavy shape, while uncommon and rare cultivars will have a visualization that is generally shifted towards the top.

Rarity: Common
Most Distant Most Similar

Chemical Information

Cannabinoid and terpenoid information provided by the grower.

Cannabinoids

THC + THCA
22.734%
CBD + CBDA
0.074%
THCV + THCVA
0.%
CBC + CBCA
n/a
CBG + CBGA
0.262%
CBN + CBNA
0.049%

Terpenoids

α-Bisabolol
0.015%
Borneol
n/a
Camphene
0.003%
Carene
0.%
Caryophyllene oxide
0.002%
β-Caryophyllene
0.236%
Fenchol
n/a
Geraniol
0.%
α-Humulene
0.299%
Limonene
0.076%
Linalool
0.037%
Myrcene
0.383%
α-Phellandrene
n/a
Terpinolene
0.001%
α-Terpineol
n/a
α-Terpinene
0.%
γ-Terpinene
0.001%
Total Nerolidol
0.02%
Total Ocimene
0.174%
α-Pinene
0.068%
β-Pinene
0.044%

Genetic Information

Plant Type
Type I

The bell curve in the heterozygosity visualization shows the distribution of heterozygosity levels for cannabis cultivars in the Kannapedia database. The green line shows where this particular strain fits within the distribution. Heterozygosity is associated with heterosis (aka hybrid vigor) but also leads to the production of more variable offspring. When plants have two genetically different parents, heterozygosity levels will be higher than if it has been inbred or backcrossed repeatedly.

Heterozygosity: 0.72%
Least Heterozygous Most Heterozygous

The ratio of reads mapped to Y-contigs to reads mapped to the whole Cannabis genome (Y-ratios) has been demonstrated to be strongly correlated with plant sex typing. This plot shows the distribution of Y-ratios for all samples in our database which were sequenced with the same method (panel or WGS) as this sample and where this sample falls in the distribution.

Y-Ratio Distribution: 0.0381
male female RSP11007

This chart represents the Illumina sequence coverage over the Bt/Bd allele. These are the three regions in the cannabis genome that impact THCA, CBDA, CBGA production. Coverage over the Active CBDAS gene is highly correlated with Type II and Type III plants as described by Etienne de Meijer. Coverage over the THCA gene is highly correlated with Type I and Type II plants but is anti-correlated with Type III plants. Type I plants require coverage over the inactive CBDA loci and no coverage over the Active CBDA gene. Lack of coverage over the Active CBDA and Active THCA allele are presumed to be Type IV plants (CBGA dominant). While deletions of entire THCAS and CBDAS genes are the most common Bt:Bd alleles observed, it is possible to have plants with these genes where functional expression of the enzyme is disrupted by deactivating point mutations (Kojoma et al. 2006).

Bt/Bd Allele Coverage

This chart represents the Illumina sequence coverage over the CBCA synthase gene.

CBCAS Coverage

Variants (THCAS, CBDAS, and CBCAS)

No variants to report

Variants (Select Genes of Interest)

Gene HGVS.c HGVS.p Annotation Annotation Impact Contig Contig Pos Ref/Alt Var Freq
aPT1

UniProt

c.406A>G p.Ile136Val missense variant moderate contig121 2839605

IGV: Start, Jump

A/G
NGS:
0.579
C90:
0.761

Nearest genetic relatives (All Samples)

0 0.042 0.083 0.125 0.167
clone distance sibling distance more distant
  1. 0.000 Blue Dream (RSP11017)
  2. 0.001 Blue Dream (RSP11005)
  3. 0.002 Blue Dream (RSP11008)
  4. 0.002 Blue Dream (RSP11033)
  5. 0.002 Snoops Dream (RSP11003)
  6. 0.003 Blue Dream (RSP11012)
  7. 0.003 Blue Dream (RSP11032)
  8. 0.003 Blue Dream (RSP11227)
  9. 0.003 Blue Dream (RSP11009)
  10. 0.004 Snoops Dream (RSP11031)
  11. 0.004 Blue Dream (RSP11342)
  12. 0.006 Blue Dream (RSP11006)
  13. 0.007 Blue Dream (RSP11010)
  14. 0.007 Blue Dream (RSP11004)
  15. 0.007 Super Blue Dream (RSP11011)
  16. 0.096 Serious Happiness (RSP10763)
  17. 0.110 Doug s Varin (RSP11243)
  18. 0.146 Electra (RSP11366)
  19. 0.149 UP Sunrise (RSP10989)
  20. 0.156 Black Jack (RSP10603)

Nearest genetic relatives (Base Tree)

0 0.067 0.133 0.200 0.267
clone distance sibling distance more distant
  1. 0.001 Blue Dream (RSP11033)
  2. 0.153 UP Sunrise (RSP10989)
  3. 0.163 Golden Goat 2 (RSP10991)
  4. 0.191 Italian Kiss (RSP11034)
  5. 0.195 Blueberry Cheesecake (RSP10684)
  6. 0.200 Gold Cracker (RSP11048)
  7. 0.203 Hermaphrodite Research Sample1 (RSP11049)
  8. 0.206 CST (RSP11002)
  9. 0.208 RKM-2018-027 (RSP11119)
  10. 0.212 RKM-2018-009 (RSP11100)
  11. 0.213 Durban Poison (RSP11014)
  12. 0.214 RKM-2018-018 (RSP11110)
  13. 0.227 Queen Jesus (RSP10105)
  14. 0.227 RKM-2018-003 (RSP11094)
  15. 0.227 RKM-2018-020 (RSP11112)
  16. 0.231 Liberty Haze (RSP11000)
  17. 0.235 Sour Raspberry (RSP10551)
  18. 0.238 RKM-2018-006 (RSP11097)
  19. 0.241 RKM-2018-029 (RSP11121)
  20. 0.242 Recon (RSP10755)

Most genetically distant strains (All Samples)

0 0.108 0.217 0.325 0.433
clone distance sibling distance more distant
  1. 0.415 BagSeed (RSP12627)
  2. 0.407 80E (RSP11213)
  3. 0.403 80E (RSP11211)
  4. 0.399 Cherry Blossom (RSP11328)
  5. 0.398 Cherry Blossom (RSP11323)
  6. 0.396 BagSeed (RSP12501)
  7. 0.395 Cherry Blossom (RSP11298)
  8. 0.388 Feral (RSP11205)
  9. 0.388 CS (RSP11208)
  10. 0.386 80E (RSP11212)
  11. 0.386 Unknown--Cherry Wine---003- (RSP11270)
  12. 0.385 Carmaleonte (RSP11207)
  13. 0.381 Cherry Blossom (RSP11311)
  14. 0.379 Carmagnola (RSP11202)
  15. 0.375 Candy Kush (RSP11492)
  16. 0.374 Kush Hemp E1 (RSP11128)
  17. 0.373 Unknown--Cherry Wine---002- (RSP11269)
  18. 0.371 Unknown--Cherry Wine---001- (RSP11268)
  19. 0.370 Feral (RSP10892)
  20. 0.367 Cbot-2019-005 (RSP11133)

Most genetically distant strains (Base Tree)

0 0.100 0.200 0.300 0.400
clone distance sibling distance more distant
  1. 0.382 Cbot-2019-005 (RSP11133)
  2. 0.374 Feral (RSP10890)
  3. 0.364 Kush Hemp E1 (RSP11128)
  4. 0.358 Carmagnola (RSP11037)
  5. 0.354 Monoica (RSP10241)
  6. 0.350 RKM-2018-026 (RSP11118)
  7. 0.350 KYRG-11 (RSP11051)
  8. 0.348 Carmagnola (RSP10979)
  9. 0.343 Santhica27 (RSP11047)
  10. 0.335 RKM-2018-002 (RSP11093)
  11. 0.333 Ivory (RSP10668)
  12. 0.331 USO 31 (RSP10981)
  13. 0.330 Kyrgyz Gold (RSP11054)
  14. 0.328 Fedora 17 (RSP10661)
  15. 0.326 Tisza (RSP11044)
  16. 0.324 Lovrin (RSP10658)
  17. 0.321 Futura 75 (RSP10664)
  18. 0.320 JL yellow (RSP11075)
  19. 0.314 Black Beauty (RSP11035)
  20. 0.314 Jiangji (RSP10653)

Nearest genetic relative in Phylos dataset

Phylos Strain SRR4448372
Overlapping SNPs:
59
Concordance:
55

Nearest genetic relative in Lynch dataset

Lynch Strain SRR3495288
Overlapping SNPs:
12
Concordance:
12

Blockchain Registration Information

Transaction ID
e2a671ac6959600e6ac4b86d7ee982afac10d1519f0c990705655eb69569dc45
Stamping Certificate
Download PDF (866.6 KB)
SHASUM Hash
3d8878e29477a32f0698e58c7f726c64844097d92d2bf7d84b3886d38ade350a
QR code for RSP11007

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