Blue Dream

RSP 11010

Grower: QualCan

General Information

Sample Name
F20161104-05-1_01FEB2017
Accession Date
September 17, 2017
Reported Plant Sex
not reported

The strain rarity visualization shows how distant the strain is from the other cultivars in the Kannapedia database. The y-axis represents genetic distance, getting farther as you go up. The width of the visualization at any position along the y-axis shows how many strains there are in the database at that genetic distance. So, a common strain will have a more bottom-heavy shape, while uncommon and rare cultivars will have a visualization that is generally shifted towards the top.

Rarity: Common
Most Distant Most Similar

Chemical Information

Cannabinoid and terpenoid information provided by the grower.

Cannabinoids

THC + THCA
28.273%
CBD + CBDA
0.046%
THCV + THCVA
0.%
CBC + CBCA
0.011%
CBG + CBGA
0.246%
CBN + CBNA
0.045%

Terpenoids

α-Bisabolol
0.%
Borneol
n/a
Camphene
0.007%
Carene
0.%
Caryophyllene oxide
0.%
β-Caryophyllene
0.078%
Fenchol
n/a
Geraniol
0.%
α-Humulene
0.089%
Limonene
0.042%
Linalool
0.03%
Myrcene
0.441%
α-Phellandrene
n/a
Terpinolene
0.001%
α-Terpineol
n/a
α-Terpinene
0.%
γ-Terpinene
0.001%
Total Nerolidol
0.005%
Total Ocimene
0.007%
α-Pinene
0.489%
β-Pinene
0.131%

Genetic Information

Plant Type
Type I

The bell curve in the heterozygosity visualization shows the distribution of heterozygosity levels for cannabis cultivars in the Kannapedia database. The green line shows where this particular strain fits within the distribution. Heterozygosity is associated with heterosis (aka hybrid vigor) but also leads to the production of more variable offspring. When plants have two genetically different parents, heterozygosity levels will be higher than if it has been inbred or backcrossed repeatedly.

Heterozygosity: 1.37%
Least Heterozygous Most Heterozygous

The ratio of reads mapped to Y-contigs to reads mapped to the whole Cannabis genome (Y-ratios) has been demonstrated to be strongly correlated with plant sex typing. This plot shows the distribution of Y-ratios for all samples in our database which were sequenced with the same method (panel or WGS) as this sample and where this sample falls in the distribution.

Y-Ratio Distribution: 0.0375
male female RSP11010

This chart represents the Illumina sequence coverage over the Bt/Bd allele. These are the three regions in the cannabis genome that impact THCA, CBDA, CBGA production. Coverage over the Active CBDAS gene is highly correlated with Type II and Type III plants as described by Etienne de Meijer. Coverage over the THCA gene is highly correlated with Type I and Type II plants but is anti-correlated with Type III plants. Type I plants require coverage over the inactive CBDA loci and no coverage over the Active CBDA gene. Lack of coverage over the Active CBDA and Active THCA allele are presumed to be Type IV plants (CBGA dominant). While deletions of entire THCAS and CBDAS genes are the most common Bt:Bd alleles observed, it is possible to have plants with these genes where functional expression of the enzyme is disrupted by deactivating point mutations (Kojoma et al. 2006).

Bt/Bd Allele Coverage

This chart represents the Illumina sequence coverage over the CBCA synthase gene.

CBCAS Coverage

Variants (THCAS, CBDAS, and CBCAS)

No variants to report

Variants (Select Genes of Interest)

Gene HGVS.c HGVS.p Annotation Annotation Impact Contig Contig Pos Ref/Alt Var Freq
aPT1

UniProt

c.629C>T p.Thr210Ile missense variant moderate contig121 2840237

IGV: Start, Jump

C/T
NGS:
0.561
C90:
0.598

Nearest genetic relatives (All Samples)

0 0.042 0.083 0.125 0.167
clone distance sibling distance more distant
  1. 0.001 Blue Dream (RSP11005)
  2. 0.004 Blue Dream (RSP11032)
  3. 0.006 Snoops Dream (RSP11003)
  4. 0.007 Blue Dream (RSP11033)
  5. 0.008 Snoops Dream (RSP11031)
  6. 0.008 Blue Dream (RSP11008)
  7. 0.008 Blue Dream (RSP11009)
  8. 0.009 Blue Dream (RSP11006)
  9. 0.009 Blue Dream (RSP11012)
  10. 0.010 Super Blue Dream (RSP11011)
  11. 0.010 Blue Dream (RSP11227)
  12. 0.010 Blue Dream (RSP11017)
  13. 0.011 Blue Dream (RSP11004)
  14. 0.011 Blue Dream (RSP11342)
  15. 0.012 Blue Dream (RSP11007)
  16. 0.087 Serious Happiness (RSP10763)
  17. 0.112 Doug s Varin (RSP11243)
  18. 0.134 Domnesia (RSP11184)
  19. 0.151 Golden Goat 2 (RSP10991)
  20. 0.152 UP Sunrise (RSP10989)

Nearest genetic relatives (Base Tree)

0 0.067 0.133 0.200 0.267
clone distance sibling distance more distant
  1. 0.007 Blue Dream (RSP11033)
  2. 0.147 Golden Goat 2 (RSP10991)
  3. 0.150 UP Sunrise (RSP10989)
  4. 0.189 Hermaphrodite Research Sample1 (RSP11049)
  5. 0.196 Italian Kiss (RSP11034)
  6. 0.206 Blueberry Cheesecake (RSP10684)
  7. 0.206 RKM-2018-018 (RSP11110)
  8. 0.207 Durban Poison (RSP11014)
  9. 0.211 Gold Cracker (RSP11048)
  10. 0.212 RKM-2018-009 (RSP11100)
  11. 0.212 CST (RSP11002)
  12. 0.223 QUEEN JESUS (RSP10105)
  13. 0.224 Liberty Haze (RSP11000)
  14. 0.226 RKM-2018-027 (RSP11119)
  15. 0.232 RKM-2018-020 (RSP11112)
  16. 0.234 RKM-2018-003 (RSP11094)
  17. 0.242 Sour Raspberry (RSP10551)
  18. 0.242 RKM-2018-006 (RSP11097)
  19. 0.245 The Gift (RSP10988)
  20. 0.251 RKM-2018-028 (RSP11120)

Most genetically distant strains (All Samples)

0 0.108 0.217 0.325 0.433
clone distance sibling distance more distant
  1. 0.409 80E (RSP11213)
  2. 0.399 80E (RSP11211)
  3. 0.393 Cherry Blossom (RSP11311)
  4. 0.389 Cherry Blossom (RSP11328)
  5. 0.388 Carmaleonte (RSP11207)
  6. 0.386 Cbot-2019-005 (RSP11133)
  7. 0.380 CS (RSP11208)
  8. 0.375 Feral (RSP11206)
  9. 0.373 80E (RSP11212)
  10. 0.372 Kush Hemp E1 (RSP11128)
  11. 0.367 Cherry Blossom (RSP11314)
  12. 0.364 Santhica27 (RSP11047)
  13. 0.364 Unknown- Cherry Wine - 001 (RSP11268)
  14. 0.363 Feral (RSP10890)
  15. 0.363 USO31 (RSP10233)
  16. 0.357 Cherry Blossom (RSP11323)
  17. 0.356 Carmagnola (RSP11202)
  18. 0.355 Santhica27 (RSP10056)
  19. 0.355 Feral (RSP11205)
  20. 0.352 Cherry Blossom (RSP11317)

Most genetically distant strains (Base Tree)

0 0.100 0.200 0.300 0.400
clone distance sibling distance more distant
  1. 0.396 Cbot-2019-005 (RSP11133)
  2. 0.391 Kush Hemp E1 (RSP11128)
  3. 0.361 Santhica27 (RSP11047)
  4. 0.352 Feral (RSP10890)
  5. 0.345 RKM-2018-026 (RSP11118)
  6. 0.339 Carmagnola (RSP11037)
  7. 0.338 Futura 75 (RSP10664)
  8. 0.335 Monoica (RSP10241)
  9. 0.329 KYRG-11 (RSP11051)
  10. 0.329 Ivory (RSP10668)
  11. 0.328 Tisza (RSP11044)
  12. 0.326 Kyrgyz Gold (RSP11054)
  13. 0.325 Cherry (RSP11142)
  14. 0.322 Carmagnola (RSP10979)
  15. 0.322 RKM-2018-002 (RSP11093)
  16. 0.320 RKM-2018-022 (RSP11114)
  17. 0.315 Fedora 17 (RSP10661)
  18. 0.315 JL yellow (RSP11075)
  19. 0.314 Blueberry Cheesecake (RSP10672)
  20. 0.313 USO 31 (RSP10981)

Nearest genetic relative in Phylos dataset

Phylos Strain SRR4448372
Overlapping SNPs:
34
Concordance:
34

Nearest genetic relative in Lynch dataset

Lynch Strain SRR3495279
Overlapping SNPs:
11
Concordance:
11

Blockchain Registration Information

Transaction ID
91864350afc193a0ac86c3212783c439635cd368539b95e5738d4bdc3e578fa4
Stamping Certificate
Download PDF (870.7 KB)
SHASUM Hash
df77d9ec3ae1c1ec2ea3818c6369029bbf4e6b8e160a35c02a8e7d442d4ea6f8
QR code for RSP11010

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