RKM-2018-032
RSP 11124
Grower: R-Kiem Seeds
General Information
- Accession Date
- October 21, 2018
- Reported Plant Sex
- Female
- Report Type
- StrainSEEK v2 3.2Mb
The strain rarity visualization shows how distant the strain is from the other cultivars in the Kannapedia database. The y-axis represents genetic distance, getting farther as you go up. The width of the visualization at any position along the y-axis shows how many strains there are in the database at that genetic distance. So, a common strain will have a more bottom-heavy shape, while uncommon and rare cultivars will have a visualization that is generally shifted towards the top.
Chemical Information
Cannabinoid and terpenoid information provided by the grower.
Cannabinoids
No information provided.
Terpenoids
No information provided.
Genetic Information
- Plant Type
- Type I
File Downloads
The bell curve in the heterozygosity visualization shows the distribution of heterozygosity levels for cannabis cultivars in the Kannapedia database. The green line shows where this particular strain fits within the distribution. Heterozygosity is associated with heterosis (aka hybrid vigor) but also leads to the production of more variable offspring. When plants have two genetically different parents, heterozygosity levels will be higher than if it has been inbred or backcrossed repeatedly.
The ratio of reads mapped to Y-contigs to reads mapped to the whole Cannabis genome (Y-ratios) has been demonstrated to be strongly correlated with plant sex typing. This plot shows the distribution of Y-ratios for all samples in our database which were sequenced with the same method (panel or WGS) as this sample and where this sample falls in the distribution.

This chart represents the Illumina sequence coverage over the Bt/Bd allele. These are the three regions in the cannabis genome that impact THCA, CBDA, CBGA production. Coverage over the Active CBDAS gene is highly correlated with Type II and Type III plants as described by Etienne de Meijer. Coverage over the THCA gene is highly correlated with Type I and Type II plants but is anti-correlated with Type III plants. Type I plants require coverage over the inactive CBDA loci and no coverage over the Active CBDA gene. Lack of coverage over the Active CBDA and Active THCA allele are presumed to be Type IV plants (CBGA dominant). While deletions of entire THCAS and CBDAS genes are the most common Bt:Bd alleles observed, it is possible to have plants with these genes where functional expression of the enzyme is disrupted by deactivating point mutations (Kojoma et al. 2006).



This chart represents the Illumina sequence coverage over the CBCA synthase gene.

Variants (THCAS, CBDAS, and CBCAS)
Variants (Select Genes of Interest)
PKSG-2a | c.67T>A | p.Phe23Ile | missense variant | moderate | contig700 | 1945567 | A/T | |
PKSG-2a | c.31A>T | p.Thr11Ser | missense variant | moderate | contig700 | 1945603 | T/A | |
PKSG-2b | c.1152T>A | p.Asn384Lys | missense variant | moderate | contig700 | 1950486 | A/T | |
PKSG-2b | c.1132C>G | p.Leu378Val | missense variant | moderate | contig700 | 1950506 | G/C |
|
PKSG-2b | c.1117A>G | p.Ile373Val | missense variant | moderate | contig700 | 1950521 | T/C | |
PKSG-2b | c.948T>G | p.Asp316Glu | missense variant | moderate | contig700 | 1950690 | A/C |
|
PKSG-2b | c.945T>G | p.Ser315Arg | missense variant | moderate | contig700 | 1950693 | A/C |
|
PKSG-2b | c.944G>A | p.Ser315Asn | missense variant | moderate | contig700 | 1950694 | C/T |
|
PKSG-2b | c.934C>G | p.His312Asp | missense variant | moderate | contig700 | 1950704 | G/C |
|
PKSG-2b | c.31A>T | p.Thr11Ser | missense variant | moderate | contig700 | 1951851 | T/A | |
PKSG-2b | c.-2_1dupATA | start lost & conservative inframe insertion | high | contig700 | 1951880 | A/ATAT |
|
|
PKSG-4b | c.527G>T | p.Trp176Leu | missense variant | moderate | contig700 | 2721146 | C/A |
|
PKSG-4b | c.526T>C | p.Trp176Arg | missense variant | moderate | contig700 | 2721147 | A/G |
|
PKSG-4b | c.496A>G | p.Lys166Glu | missense variant | moderate | contig700 | 2721177 | T/C | |
PKSG-4b | c.489delT | p.Phe163fs | frameshift variant | high | contig700 | 2721183 | CA/C | |
PKSG-4b | c.485A>G | p.Lys162Arg | missense variant | moderate | contig700 | 2721188 | T/C | |
PKSG-4b | c.431T>G | p.Val144Gly | missense variant | moderate | contig700 | 2721242 | A/C | |
PKSG-4b | c.419A>G | p.Asp140Gly | missense variant | moderate | contig700 | 2721254 | T/C | |
PKSG-4b |
c.352_355del |
p.Thr118fs | frameshift variant | high | contig700 | 2721317 | CCTGT/C |
|
PKSG-4b | c.323A>G | p.Glu108Gly | missense variant | moderate | contig700 | 2721350 | T/C |
|
DXR-2 | c.1319T>C | p.Ile440Thr | missense variant | moderate | contig380 | 285250 | A/G |
|
aPT4 |
c.235_236del |
p.Val79fs | frameshift variant | high | contig121 | 2829030 | ATG/A |
|
aPT4 | c.238delT | p.Ser80fs | frameshift variant | high | contig121 | 2829034 | AT/A |
|
aPT4 | c.302A>G | p.Asn101Ser | missense variant | moderate | contig121 | 2829099 | A/G |
|
aPT4 | c.775delT | p.Tyr259fs | frameshift variant | high | contig121 | 2831380 | AT/A |
|
aPT4 | c.1168T>C | p.Tyr390His | missense variant | moderate | contig121 | 2833503 | T/C |
|
aPT1 | c.406A>G | p.Ile136Val | missense variant | moderate | contig121 | 2839605 | A/G | |
aPT1 | c.629C>T | p.Thr210Ile | missense variant | moderate | contig121 | 2840237 | C/T | |
HDS-2 |
c.82_93delGT |
p.Val28_Thr3 |
conservative inframe deletion | moderate | contig95 | 1989748 |
CGTAACCGGAAC |
|
HDS-2 | c.127T>G | p.Ser43Ala | missense variant | moderate | contig95 | 1989794 | T/G |
|
Nearest genetic relatives (All Samples)
- 0.000 RKM-2018-017 (RSP11109)
- 0.000 RKM-2018-021 (RSP11113)
- 0.151 Pure Power Plant (RSP11265)
- 0.157 501st OG (RSP11241)
- 0.163 Super Sour Diesel (RSP11191)
- 0.164 Gorilla Cookies (RSP11231)
- 0.164 RKM-2018-008 (RSP11099)
- 0.178 Blueberry Cheesecake (RSP10684)
- 0.180 The Gift (RSP10988)
- 0.180 East Coast Sour Diesel (RSP10243)
- 0.186 Sour D (RSP11343)
- 0.191 Rugburn OG (RSP11353)
- 0.196 RKM-2018-013 (RSP11104)
- 0.196 Power Plant (RSP11223)
- 0.196 RKM-2018-002 (RSP11093)
- 0.200 Star Dawg (RSP11352)
- 0.201 SFVxTK (RSP11072)
- 0.202 New York City Deisel (RSP11225)
- 0.203 NSPM1 (RSP11362)
- 0.205 Skywalker OG (RSP10837)
Nearest genetic relatives (Base Tree)
- 0.173 The Gift (RSP10988)
- 0.176 Blueberry Cheesecake (RSP10684)
- 0.202 Hermaphrodite ResearchSample2 (RSP11050)
- 0.203 RKM-2018-002 (RSP11093)
- 0.211 Skywalker OG (RSP10837)
- 0.214 Blueberry Cheesecake (RSP10680)
- 0.217 Hermaphrodite Research Sample1 (RSP11049)
- 0.219 RKM-2018-034 (RSP11126)
- 0.224 RKM-2018-009 (RSP11100)
- 0.231 RKM-2018-033 (RSP11125)
- 0.232 Pie Hoe (RSP11073)
- 0.233 RKM-2018-005 (RSP11096)
- 0.235 RKM-2018-026 (RSP11118)
- 0.246 Gold Cracker (RSP11048)
- 0.246 Kimbo Slice (RSP10997)
- 0.250 Liberty Haze (RSP11000)
- 0.258 RKM-2018-020 (RSP11112)
- 0.263 RKM-2018-029 (RSP11121)
- 0.267 Golden Goat 2 (RSP10991)
- 0.268 Kush Hemp E1 (RSP11128)
Most genetically distant strains (All Samples)
- 0.485 Unknown- Cherry Wine - 001 (RSP11268)
- 0.462 Cherry Blossom (RSP11311)
- 0.452 Cherry Blossom (RSP11318)
- 0.451 Unknown- Cherry Wine - 003 (RSP11270)
- 0.450 Cherry Blossom (RSP11328)
- 0.446 Cherry Blossom (RSP11323)
- 0.445 Unknown- Cherry Wine - 002 (RSP11269)
- 0.442 Cherry Blossom (RSP11317)
- 0.437 Cherry Blossom (RSP11314)
- 0.433 JL 3rd Gen Father (RSP11196)
- 0.429 Cherry Blossom (RSP11312)
- 0.429 Unknown- Cherry Wine - 004 (RSP11271)
- 0.429 Cherry Blossom (RSP11334)
- 0.428 Cherry Blossom (RSP11309)
- 0.427 Cherry Blossom (RSP11301)
- 0.424 Cherry Blossom (RSP11308)
- 0.423 Cherry Blossom (RSP11274)
- 0.423 Cherry Blossom (RSP11335)
- 0.422 Cherry Blossom (RSP11298)
- 0.420 Cherry Wine (RSP11267)
Most genetically distant strains (Base Tree)
- 0.395 Cherry (RSP11142)
- 0.387 Cbot-2019-005 (RSP11133)
- 0.372 Feral (RSP10890)
- 0.368 Cherry (RSP11143)
- 0.365 Carmagnola (RSP11037)
- 0.364 Monoica (RSP10241)
- 0.357 Lovrin (RSP10658)
- 0.357 Santhica27 (RSP11047)
- 0.355 JL yellow (RSP11075)
- 0.353 Futura 75 (RSP10664)
- 0.352 Ivory (RSP10668)
- 0.344 Carmagnola (RSP10979)
- 0.344 Jiangji (RSP10653)
- 0.342 USO 31 (RSP10981)
- 0.341 Cbot-2019-001 (RSP11129)
- 0.339 Fedora 17 (RSP10661)
- 0.339 Blueberry Cheesecake (RSP10672)
- 0.339 Kyrgyz Gold (RSP11054)
- 0.338 Black Beauty (RSP11035)
- 0.337 Tisza (RSP11044)
Nearest genetic relative in Phylos dataset
- Overlapping SNPs:
- 94
- Concordance:
- 91
Nearest genetic relative in Lynch dataset
- Overlapping SNPs:
- 4
- Concordance:
- 4
Blockchain Registration Information
- Transaction ID
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ce2e936dbf78a610
f8bfc21b71485385 30efdc2570c58df8 19e3fc2831a8fe2a - Stamping Certificate
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- SHASUM Hash
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351a4e5cb68cd72b e0eb0df8859d84fb a956c656fce0fa4a