Kush Hemp E1
RSP 11128
Grower: Sovereign Fields
General Information
- Accession Date
- January 16, 2019
- Reported Plant Sex
- Female
- Report Type
- StrainSEEK v2 3.2Mb
The strain rarity visualization shows how distant the strain is from the other cultivars in the Kannapedia database. The y-axis represents genetic distance, getting farther as you go up. The width of the visualization at any position along the y-axis shows how many strains there are in the database at that genetic distance. So, a common strain will have a more bottom-heavy shape, while uncommon and rare cultivars will have a visualization that is generally shifted towards the top.
Chemical Information
Cannabinoid and terpenoid information provided by the grower.
Cannabinoids
No information provided.
Terpenoids
No information provided.
Genetic Information
- Plant Type
- Type III
File Downloads
The bell curve in the heterozygosity visualization shows the distribution of heterozygosity levels for cannabis cultivars in the Kannapedia database. The green line shows where this particular strain fits within the distribution. Heterozygosity is associated with heterosis (aka hybrid vigor) but also leads to the production of more variable offspring. When plants have two genetically different parents, heterozygosity levels will be higher than if it has been inbred or backcrossed repeatedly.
The ratio of reads mapped to Y-contigs to reads mapped to the whole Cannabis genome (Y-ratios) has been demonstrated to be strongly correlated with plant sex typing. This plot shows the distribution of Y-ratios for all samples in our database which were sequenced with the same method (panel or WGS) as this sample and where this sample falls in the distribution.

This chart represents the Illumina sequence coverage over the Bt/Bd allele. These are the three regions in the cannabis genome that impact THCA, CBDA, CBGA production. Coverage over the Active CBDAS gene is highly correlated with Type II and Type III plants as described by Etienne de Meijer. Coverage over the THCA gene is highly correlated with Type I and Type II plants but is anti-correlated with Type III plants. Type I plants require coverage over the inactive CBDA loci and no coverage over the Active CBDA gene. Lack of coverage over the Active CBDA and Active THCA allele are presumed to be Type IV plants (CBGA dominant). While deletions of entire THCAS and CBDAS genes are the most common Bt:Bd alleles observed, it is possible to have plants with these genes where functional expression of the enzyme is disrupted by deactivating point mutations (Kojoma et al. 2006).



This chart represents the Illumina sequence coverage over the CBCA synthase gene.

Variants (THCAS, CBDAS, and CBCAS)
No variants to report
Variants (Select Genes of Interest)
PKSG-2a | c.67T>A | p.Phe23Ile | missense variant | moderate | contig700 | 1945567 | A/T | |
PKSG-2a | c.31A>T | p.Thr11Ser | missense variant | moderate | contig700 | 1945603 | T/A | |
PKSG-2b | c.1152T>A | p.Asn384Lys | missense variant | moderate | contig700 | 1950486 | A/T | |
PKSG-2b | c.1132C>G | p.Leu378Val | missense variant | moderate | contig700 | 1950506 | G/C |
|
PKSG-2b | c.1117A>G | p.Ile373Val | missense variant | moderate | contig700 | 1950521 | T/C | |
PKSG-2b | c.948T>G | p.Asp316Glu | missense variant | moderate | contig700 | 1950690 | A/C |
|
PKSG-2b | c.945T>G | p.Ser315Arg | missense variant | moderate | contig700 | 1950693 | A/C |
|
PKSG-2b | c.944G>A | p.Ser315Asn | missense variant | moderate | contig700 | 1950694 | C/T |
|
PKSG-2b | c.934C>G | p.His312Asp | missense variant | moderate | contig700 | 1950704 | G/C |
|
PKSG-2b | c.31A>T | p.Thr11Ser | missense variant | moderate | contig700 | 1951851 | T/A | |
PKSG-2b | c.-2_1dupATA | start lost & conservative inframe insertion | high | contig700 | 1951880 | A/ATAT |
|
|
PKSG-4b | c.496A>G | p.Lys166Glu | missense variant | moderate | contig700 | 2721177 | T/C | |
PKSG-4b | c.489delT | p.Phe163fs | frameshift variant | high | contig700 | 2721183 | CA/C | |
PKSG-4b | c.485A>G | p.Lys162Arg | missense variant | moderate | contig700 | 2721188 | T/C | |
PKSG-4b | c.431T>G | p.Val144Gly | missense variant | moderate | contig700 | 2721242 | A/C | |
PKSG-4b |
c.352_355del |
p.Thr118fs | frameshift variant | high | contig700 | 2721317 | CCTGT/C |
|
aPT4 | c.1168T>C | p.Tyr390His | missense variant | moderate | contig121 | 2833503 | T/C |
|
aPT1 | c.629C>T | p.Thr210Ile | missense variant | moderate | contig121 | 2840237 | C/T | |
HDS-2 |
c.82_93delGT |
p.Val28_Thr3 |
conservative inframe deletion | moderate | contig95 | 1989748 |
CGTAACCGGAAC |
|
Nearest genetic relatives (All Samples)
- 0.197 RKM-2018-008 (RSP11099)
- 0.219 The Gift (RSP10988)
- 0.235 RKM-2018-012 (RSP11103)
- 0.244 LEMONCAKE (RSP11340)
- 0.247 Cbot-2019-005 (RSP11133)
- 0.253 Pie Hoe (RSP11073)
- 0.254 Rugburn OG (RSP11353)
- 0.255 RKM-2018-013 (RSP11104)
- 0.257 RKM-2018-017 (RSP11109)
- 0.261 RKM-2018-032 (RSP11124)
- 0.262 RKM-2018-021 (RSP11113)
- 0.263 Hermaphrodite ResearchSample2 (RSP11050)
- 0.266 Square Wave (RSP11344)
- 0.270 Skywalker OG (RSP10837)
- 0.271 Hermaphrodite ResearchSample2 (RSP11043)
- 0.271 SFVxTK (RSP11072)
- 0.271 JABBA S STASH (RSP11348)
- 0.277 Sunday Driver (RSP11071)
- 0.277 RKM-2018-034 (RSP11126)
- 0.279 RKM-2018-026 (RSP11118)
Nearest genetic relatives (Base Tree)
- 0.214 The Gift (RSP10988)
- 0.257 Cbot-2019-005 (RSP11133)
- 0.259 Pie Hoe (RSP11073)
- 0.263 Skywalker OG (RSP10837)
- 0.266 RKM-2018-034 (RSP11126)
- 0.268 RKM-2018-032 (RSP11124)
- 0.273 Hermaphrodite ResearchSample2 (RSP11050)
- 0.276 RKM-2018-026 (RSP11118)
- 0.296 Blueberry Cheesecake (RSP10684)
- 0.300 Cbot-2019-004 (RSP11132)
- 0.301 Gold Cracker (RSP11048)
- 0.303 Recon (RSP10755)
- 0.304 Cbot-2019-006 (RSP11134)
- 0.307 RKM-2018-022 (RSP11114)
- 0.309 Kimbo Slice (RSP10997)
- 0.310 RKM-2018-033 (RSP11125)
- 0.312 KYRG-11 (RSP11051)
- 0.319 RKM-2018-009 (RSP11100)
- 0.320 Skunk 18 (RSP11038)
- 0.324 Liberty Haze (RSP11000)
Most genetically distant strains (All Samples)
- 0.537 Cherry Blossom (RSP11318)
- 0.537 Cherry Blossom (RSP11328)
- 0.489 Cherry Blossom (RSP11323)
- 0.485 Unknown- Cherry Wine - 001 (RSP11268)
- 0.475 Cherry Blossom (RSP11330)
- 0.473 Cherry Blossom (RSP11310)
- 0.472 Cherry Blossom (RSP11309)
- 0.458 Cherry Blossom (RSP11301)
- 0.455 Cherry Blossom (RSP11327)
- 0.453 Cherry Blossom (RSP11321)
- 0.452 Unknown- Cherry Wine - 003 (RSP11270)
- 0.451 Unknown- Cherry Wine - 002 (RSP11269)
- 0.449 Cherry Blossom (RSP11312)
- 0.448 Alaska (RSP10939)
- 0.446 Cherry Blossom (RSP11302)
- 0.445 Cherry Blossom (RSP11332)
- 0.445 Cherry Blossom (RSP11334)
- 0.445 Cherry Blossom (RSP11326)
- 0.442 Cherry Blossom (RSP11298)
- 0.436 Cherry Blossom (RSP11317)
Most genetically distant strains (Base Tree)
- 0.409 Cherry (RSP11143)
- 0.405 UP Sunrise (RSP10989)
- 0.396 JL yellow (RSP11075)
- 0.392 Italian Kiss (RSP11034)
- 0.390 Carmagnola (RSP11037)
- 0.385 Feral (RSP10890)
- 0.384 RKM-2018-003 (RSP11094)
- 0.380 Blueberry Cheesecake (RSP10672)
- 0.379 RKM-2018-023 (RSP11115)
- 0.378 RKM-2018-031 (RSP11123)
- 0.377 RKM-2018-018 (RSP11110)
- 0.377 Cherry (RSP11142)
- 0.374 Blue Dream (RSP11033)
- 0.373 Carmagnola (RSP10979)
- 0.373 RKM-2018-027 (RSP11119)
- 0.372 RKM-2018-005 (RSP11096)
- 0.368 Cbot-2019-001 (RSP11129)
- 0.366 Santhica27 (RSP11047)
- 0.364 Futura 75 (RSP10664)
- 0.363 Jiangji (RSP10653)
Nearest genetic relative in Phylos dataset
- Overlapping SNPs:
- 113
- Concordance:
- 75
Nearest genetic relative in Lynch dataset
- Overlapping SNPs:
- 3
- Concordance:
- 3
Blockchain Registration Information
- Transaction ID
-
2c5574a5fe0f2437
95f255923473a88e bd25a3eb327c8838 3ed4068fa740754d - Stamping Certificate
- Download PDF (854.9 KB)
- SHASUM Hash
-
c0e4593292350db2
9b252521ed6ab542 47c0bc6daf6f92b8 cf467c058a77ddc4