Advanced Strain Search

Domnesia

RSP 11184

Grower: NETA

General Information

Accession Date
June 26, 2019
Reported Plant Sex
Female

The strain rarity visualization shows how distant the strain is from the other cultivars in the Kannapedia database. The y-axis represents genetic distance, getting farther as you go up. The width of the visualization at any position along the y-axis shows how many strains there are in the database at that genetic distance. So, a common strain will have a more bottom-heavy shape, while uncommon and rare cultivars will have a visualization that is generally shifted towards the top.

Rarity: Common
Most Distant Most Similar

Chemical Information

Cannabinoid and terpenoid information provided by the grower.

Cannabinoids

THC + THCA
19.5%
CBD + CBDA
0.2%
THCV + THCVA
0.%
CBC + CBCA
n/a
CBG + CBGA
0.9%
CBN + CBNA
n/a

Terpenoids

No information provided.

Genetic Information

Plant Type
Type I

File Downloads

The bell curve in the heterozygosity visualization shows the distribution of heterozygosity levels for cannabis cultivars in the Kannapedia database. The green line shows where this particular strain fits within the distribution. Heterozygosity is associated with heterosis (aka hybrid vigor) but also leads to the production of more variable offspring. When plants have two genetically different parents, heterozygosity levels will be higher than if it has been inbred or backcrossed repeatedly.

Heterozygosity: 1.73%
Least Heterozygous Most Heterozygous

This chart represents the Illumina sequence coverage over the Bt/Bd allele. These are the three regions in the cannabis genome that impact THCA, CBDA, CBGA production. Coverage over the Active CBDAS gene is highly correlated with Type II and Type III plants as described by Etienne de Meijer. Coverage over the THCA gene is highly correlated with Type I and Type II plants but is anti-correlated with Type III plants. Type I plants require coverage over the inactive CBDA loci and no coverage over the Active CBDA gene. Lack of coverage over the Active CBDA and Active THCA allele are presumed to be Type IV plants (CBGA dominant). While deletions of entire THCAS and CBDAS genes are the most common Bt:Bd alleles observed, it is possible to have plants with these genes where functional expression of the enzyme is disrupted by deactivating point mutations (Kojoma et al. 2006).

Bt/Bd Allele Coverage

This chart represents the Illumina sequence coverage over the CBCA synthase gene.

CBCAS Coverage

Variants (THCAS, CBDAS, and CBCAS)

No variants to report

Variants (Select Genes of Interest)
GPPs1

UniProt

c.845_848delAAAG p.Glu282fs frameshift variant high contig676 169629

IGV: Start, Jump

TGAAA/T
NGS:
0.118
C90:
0.000
GPPs1

UniProt

c.896A>G p.Asn299Ser missense variant moderate contig676 169772

IGV: Start, Jump

A/G
NGS:
0.046
C90:
0.000
EMF1-2

UniProt

c.1384A>C p.Lys462Gln missense variant moderate contig885 2270

IGV: Start, Jump

A/C
NGS:
0.013
C90:
0.254
PHL-2 c.932T>C p.Leu311Pro missense variant moderate contig2621 340210

IGV: Start, Jump

T/C
NGS:
0.039
C90:
0.268
PKSG-2b

UniProt

c.-2_1dupATA start lost & conservative inframe insertion high contig700 1951880

IGV: Start, Jump

A/ATAT
NGS:
0.410
C90:
0.000
OAC-2

UniProt

c.260C>G p.Ser87Cys missense variant moderate contig931 109979

IGV: Start, Jump

G/C
NGS:
0.070
C90:
0.000
ELF3

UniProt

c.752G>T p.Gly251Val missense variant moderate contig97 242458

IGV: Start, Jump

G/T
NGS:
0.022
C90:
0.139
ELF3

UniProt

c.772A>G p.Ser258Gly missense variant moderate contig97 242478

IGV: Start, Jump

A/G
NGS:
0.112
C90:
0.000
ELF3

UniProt

c.812G>C p.Gly271Ala missense variant moderate contig97 242518

IGV: Start, Jump

G/C
NGS:
0.114
C90:
0.938
ELF3

UniProt

c.2198G>T p.Arg733Leu missense variant moderate contig97 245029

IGV: Start, Jump

G/T
NGS:
0.125
C90:
0.531
HDS-2

UniProt

c.127T>G p.Ser43Ala missense variant moderate contig95 1989794

IGV: Start, Jump

T/G
NGS:
0.721
C90:
0.000
AAE1-2

UniProt

c.884C>T p.Thr295Ile missense variant moderate contig81 209846

IGV: Start, Jump

C/T
NGS:
0.042
C90:
0.000
PHL-1

UniProt

c.2561A>T p.Asn854Ile missense variant moderate contig1439 1487236

IGV: Start, Jump

T/A
NGS:
0.046
C90:
0.612
PHL-1

UniProt

c.2551A>G p.Thr851Ala missense variant moderate contig1439 1487246

IGV: Start, Jump

T/C
NGS:
0.116
C90:
0.890
Edestin

UniProt

c.16T>C p.Ser6Pro missense variant moderate contig850 3065274

IGV: Start, Jump

A/G
NGS:
0.059
C90:
0.000
HDS-1

UniProt

c.1381G>A p.Asp461Asn missense variant moderate contig1891 886367

IGV: Start, Jump

C/T
NGS:
0.029
C90:
0.000
HDS-1

UniProt

c.1378G>A p.Val460Ile missense variant moderate contig1891 886370

IGV: Start, Jump

C/T
NGS:
0.167
C90:
0.000
FT

UniProt

c.240C>G p.Asn80Lys missense variant moderate contig1561 3124664

IGV: Start, Jump

C/G
NGS:
0.075
C90:
0.000
FLD

UniProt

c.125G>A p.Ser42Asn missense variant moderate contig1450 2047909

IGV: Start, Jump

C/T
NGS:
0.037
C90:
0.388
AAE1-3

UniProt

c.659G>A p.Arg220Gln missense variant moderate contig976 1083195

IGV: Start, Jump

C/T
NGS:
0.077
C90:
0.000
AAE1-3

UniProt

c.634G>C p.Gly212Arg missense variant moderate contig976 1083220

IGV: Start, Jump

C/G
NGS:
0.116
C90:
0.000

Nearest genetic relatives (All Samples)

0 0.042 0.083 0.125 0.167
clone distance sibling distance more distant
  1. 0.098 Serious Happiness (RSP10763)
  2. 0.112 Doug s Varin (RSP11243)
  3. 0.125 Super Blue Dream (RSP11011)
  4. 0.130 Durban Poison 1 (RSP10996)
  5. 0.134 Blue Dream (RSP11010)
  6. 0.135 NSPM1 (RSP11362)
  7. 0.141 Blue Dream (RSP11006)
  8. 0.142 Durban Poison 1 (RSP11013)
  9. 0.142 Blue Dream (RSP11017)
  10. 0.149 Blueberry Cheesecake (RSP10684)
  11. 0.150 Blue Dream (RSP11004)
  12. 0.153 Blue Dream (RSP11009)
  13. 0.154 Durban Poison (RSP11014)
  14. 0.157 JL 4th Gen 7 (RSP11153)
  15. 0.158 Whitey (RSP11363)
  16. 0.160 Durban Poison (RSP10998)
  17. 0.161 Erez (RSP10942)
  18. 0.162 Blue Dream (RSP11007)
  19. 0.162 Gold Cracker (RSP11048)
  20. 0.166 SHERBERT (RSP11355)

Nearest genetic relatives (Base Tree)

0 0.067 0.133 0.200 0.267
clone distance sibling distance more distant
  1. 0.153 Blueberry Cheesecake (RSP10684)
  2. 0.161 Durban Poison (RSP11014)
  3. 0.175 Gold Cracker (RSP11048)
  4. 0.182 Golden Goat 2 (RSP10991)
  5. 0.184 Liberty Haze (RSP11000)
  6. 0.211 Hermaphrodite Research Sample1 (RSP11049)
  7. 0.217 Hermaphrodite ResearchSample2 (RSP11050)
  8. 0.224 Blue Dream (RSP11033)
  9. 0.227 RKM-2018-009 (RSP11100)
  10. 0.229 UP Sunrise (RSP10989)
  11. 0.232 Cbot-2019-006 (RSP11134)
  12. 0.232 RKM-2018-032 (RSP11124)
  13. 0.233 RKM-2018-020 (RSP11112)
  14. 0.235 RKM-2018-033 (RSP11125)
  15. 0.236 RKM-2018-034 (RSP11126)
  16. 0.236 Italian Kiss (RSP11034)
  17. 0.238 CST (RSP11002)
  18. 0.243 RKM-2018-027 (RSP11119)
  19. 0.244 RKM-2018-003 (RSP11094)
  20. 0.244 RKM-2018-029 (RSP11121)

Most genetically distant strains (All Samples)

0 0.100 0.200 0.300 0.400
clone distance sibling distance more distant
  1. 0.393 80E (RSP11213)
  2. 0.386 Cherry Blossom (RSP11323)
  3. 0.374 Cherry Blossom (RSP11318)
  4. 0.367 Feral (RSP11205)
  5. 0.365 80E (RSP11212)
  6. 0.365 JL yellow (RSP11075)
  7. 0.359 Cherry Blossom (RSP11311)
  8. 0.355 JL 3rd Gen Mother (RSP11197)
  9. 0.351 80E (RSP11211)
  10. 0.349 CS (RSP11208)
  11. 0.348 Cherry Blossom (RSP11314)
  12. 0.348 Feral (RSP11206)
  13. 0.346 Feral (RSP10892)
  14. 0.344 Feral (RSP10891)
  15. 0.344 Unknown- Cherry Wine - 001 (RSP11268)
  16. 0.341 Carmaleonte (RSP11207)
  17. 0.341 Cherry Blossom (RSP11334)
  18. 0.340 JL 3rd Gen Mother (RSP11214)
  19. 0.339 Unknown- Cherry Wine - 004 (RSP11271)
  20. 0.339 Cherry Blossom (RSP11328)

Most genetically distant strains (Base Tree)

0 0.100 0.200 0.300 0.400
clone distance sibling distance more distant
  1. 0.370 JL yellow (RSP11075)
  2. 0.349 Cbot-2019-005 (RSP11133)
  3. 0.345 Carmagnola (RSP11037)
  4. 0.345 Feral (RSP10890)
  5. 0.343 Ivory (RSP10668)
  6. 0.337 Kush Hemp E1 (RSP11128)
  7. 0.332 Carmagnola (RSP10979)
  8. 0.331 Santhica27 (RSP11047)
  9. 0.328 Futura 75 (RSP10664)
  10. 0.327 Monoica (RSP10241)
  11. 0.321 KYRG-11 (RSP11051)
  12. 0.319 USO 31 (RSP10981)
  13. 0.314 Tisza (RSP11044)
  14. 0.309 RKM-2018-026 (RSP11118)
  15. 0.307 Kyrgyz Gold (RSP11054)
  16. 0.307 Jiangji (RSP10653)
  17. 0.295 Tisza (RSP10659)
  18. 0.295 Blueberry Cheesecake (RSP10672)
  19. 0.293 Lovrin (RSP10658)
  20. 0.293 Fedora 17 (RSP10661)

Nearest genetic relative in Phylos dataset

Phylos Strain SRR4448347
Overlapping SNPs:
46
Concordance:
36

Nearest genetic relative in Lynch dataset

Lynch Strain SRR3495262
Overlapping SNPs:
7
Concordance:
7

Blockchain Registration Information

Transaction ID
b9d80d35c63c0027cbaacfa98d69a021f37847f3b01bf6fd252db05ed04118ba
Stamping Certificate
Download PDF (856.7 KB)
SHASUM Hash
84755097fbd0e889eed6ae41f1863b07a6ccffe6538a73ea71119e9b8eb04a54
QR code for RSP11184

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