Tiborszallasie
RSP 11210
General Information
- Sample Name
- Tibor_1_2016_CSU
- Accession Date
- June 26, 2019
- Reported Plant Sex
- not reported
- Report Type
- StrainSEEK v2 3.2Mb
The strain rarity visualization shows how distant the strain is from the other cultivars in the Kannapedia database. The y-axis represents genetic distance, getting farther as you go up. The width of the visualization at any position along the y-axis shows how many strains there are in the database at that genetic distance. So, a common strain will have a more bottom-heavy shape, while uncommon and rare cultivars will have a visualization that is generally shifted towards the top.
Chemical Information
Cannabinoid and terpenoid information provided by the grower.
Cannabinoids
No information provided.
Terpenoids
No information provided.
Genetic Information
- Plant Type
- Type II
File Downloads
The bell curve in the heterozygosity visualization shows the distribution of heterozygosity levels for cannabis cultivars in the Kannapedia database. The green line shows where this particular strain fits within the distribution. Heterozygosity is associated with heterosis (aka hybrid vigor) but also leads to the production of more variable offspring. When plants have two genetically different parents, heterozygosity levels will be higher than if it has been inbred or backcrossed repeatedly.
This chart represents the Illumina sequence coverage over the Bt/Bd allele. These are the three regions in the cannabis genome that impact THCA, CBDA, CBGA production. Coverage over the Active CBDAS gene is highly correlated with Type II and Type III plants as described by Etienne de Meijer. Coverage over the THCA gene is highly correlated with Type I and Type II plants but is anti-correlated with Type III plants. Type I plants require coverage over the inactive CBDA loci and no coverage over the Active CBDA gene. Lack of coverage over the Active CBDA and Active THCA allele are presumed to be Type IV plants (CBGA dominant). While deletions of entire THCAS and CBDAS genes are the most common Bt:Bd alleles observed, it is possible to have plants with these genes where functional expression of the enzyme is disrupted by deactivating point mutations (Kojoma et al. 2006).



This chart represents the Illumina sequence coverage over the CBCA synthase gene.

Variants (THCAS, CBDAS, and CBCAS)
CBDAS | c.8G>A | p.Cys3Tyr | missense variant | moderate | contig1772 | 2082234 | G/A |
|
CBDAS | c.221C>G | p.Thr74Ser | missense variant | moderate | contig1772 | 2082447 | C/G | |
CBDAS | c.503A>G | p.Asn168Ser | missense variant | moderate | contig1772 | 2082729 | A/G | |
CBDAS | c.587A>G | p.Asn196Ser | missense variant | moderate | contig1772 | 2082813 | A/G | |
CBDAS | c.1420A>C | p.Lys474Gln | missense variant | moderate | contig1772 | 2083646 | A/C | |
CBDAS | c.1628G>A | p.Arg543His | missense variant | moderate | contig1772 | 2083854 | G/A |
|
THCAS | c.1625C>T | p.Pro542Leu | missense variant | moderate | contig741 | 4416203 | G/A |
|
THCAS | c.187A>C | p.Ile63Leu | missense variant | moderate | contig741 | 4417641 | T/G |
Variants (Select Genes of Interest)
GPPs1 | c.744C>G | p.Asp248Glu | missense variant | moderate | contig676 | 168993 | C/G |
|
GPPs1 |
c.845_848del |
p.Glu282fs | frameshift variant | high | contig676 | 169629 | TGAAA/T |
|
GPPs1 | c.896A>G | p.Asn299Ser | missense variant | moderate | contig676 | 169772 | A/G |
|
EMF1-2 | c.710A>C | p.His237Pro | missense variant | moderate | contig885 | 810 | A/C | |
PHL-2 | c.73C>T | p.Arg25Cys | missense variant | moderate | contig2621 | 337642 | C/T |
|
PHL-2 | c.455A>C | p.Asp152Ala | missense variant | moderate | contig2621 | 339191 | A/C | |
PHL-2 | c.977A>C | p.His326Pro | missense variant | moderate | contig2621 | 340255 | A/C |
|
PHL-2 | c.1837G>A | p.Glu613Lys | missense variant | moderate | contig2621 | 341115 | G/A |
|
PHL-2 | c.2564T>A | p.Phe855Tyr | missense variant | moderate | contig2621 | 342607 | T/A | |
PHL-2 | c.2578T>A | p.Leu860Ile | missense variant | moderate | contig2621 | 342621 | T/A | |
PHL-2 | c.2783G>A | p.Ser928Asn | missense variant | moderate | contig2621 | 342826 | G/A | |
PHL-2 | c.2830A>C | p.Asn944His | missense variant | moderate | contig2621 | 342873 | A/C |
|
PHL-2 | c.2933G>T | p.Arg978Leu | missense variant | moderate | contig2621 | 342976 | G/T | |
PHL-2 | c.2936T>G | p.Val979Gly | missense variant | moderate | contig2621 | 342979 | T/G |
|
PHL-2 | c.3209A>G | p.Gln1070Arg | missense variant | moderate | contig2621 | 343252 | A/G | |
PHL-2 | c.3467A>G | p.Gln1156Arg | missense variant | moderate | contig2621 | 343510 | A/G | |
PKSG-2a | c.774G>A | p.Met258Ile | missense variant | moderate | contig700 | 1944616 | C/T |
|
PKSG-2a | c.67T>A | p.Phe23Ile | missense variant | moderate | contig700 | 1945567 | A/T | |
PKSG-2a | c.31A>T | p.Thr11Ser | missense variant | moderate | contig700 | 1945603 | T/A | |
PKSG-2b | c.1152T>A | p.Asn384Lys | missense variant | moderate | contig700 | 1950486 | A/T | |
PKSG-2b | c.1132C>G | p.Leu378Val | missense variant | moderate | contig700 | 1950506 | G/C |
|
PKSG-2b | c.1117A>G | p.Ile373Val | missense variant | moderate | contig700 | 1950521 | T/C | |
PKSG-2b | c.774G>A | p.Met258Ile | missense variant | moderate | contig700 | 1950864 | C/T | |
PKSG-2b | c.31A>T | p.Thr11Ser | missense variant | moderate | contig700 | 1951851 | T/A | |
PKSG-4b | c.558-1G>A | splice acceptor variant & intron variant | high | contig700 | 2715037 | C/T |
|
|
PKSG-4b |
c.353_354ins |
p.Gly119fs | frameshift variant | high | contig700 | 2721319 | T/TGG |
|
PKSG-4b | c.324A>C | p.Glu108Asp | missense variant | moderate | contig700 | 2721349 | T/G |
|
PKSG-4b | c.323A>G | p.Glu108Gly | missense variant | moderate | contig700 | 2721350 | T/C |
|
PKSG-4b | c.316+2T>A | splice donor variant & intron variant | high | contig700 | 2723818 | A/T | ||
PKSG-4b | c.229G>A | p.Gly77Ser | missense variant | moderate | contig700 | 2724206 | C/T |
|
PKSG-4b | c.216G>C | p.Leu72Phe | missense variant | moderate | contig700 | 2724219 | C/G |
|
PKSG-4b | c.206T>C | p.Leu69Ser | missense variant | moderate | contig700 | 2724229 | A/G |
|
DXR-2 | c.1319T>C | p.Ile440Thr | missense variant | moderate | contig380 | 285250 | A/G |
|
OAC-2 | c.260C>G | p.Ser87Cys | missense variant | moderate | contig931 | 109979 | G/C |
|
OAC-2 | c.220A>G | p.Ile74Val | missense variant | moderate | contig931 | 110019 | T/C | |
OAC-1 | c.260C>G | p.Ser87Cys | missense variant | moderate | contig931 | 118104 | G/C |
|
OAC-1 | c.220A>G | p.Ile74Val | missense variant | moderate | contig931 | 118144 | T/C | |
OAC-1 | c.185C>T | p.Thr62Ile | missense variant | moderate | contig931 | 118179 | G/A |
|
OAC-1 | c.175G>A | p.Val59Ile | missense variant | moderate | contig931 | 118189 | C/T |
|
ELF3 | c.574A>G | p.Asn192Asp | missense variant | moderate | contig97 | 242280 | A/G | |
ELF3 | c.757C>T | p.Pro253Ser | missense variant | moderate | contig97 | 242463 | C/T | |
ELF3 | c.772A>G | p.Ser258Gly | missense variant | moderate | contig97 | 242478 | A/G |
|
ELF3 | c.812G>C | p.Gly271Ala | missense variant | moderate | contig97 | 242518 | G/C | |
ELF3 | c.1229+2T>C | splice donor variant & intron variant | high | contig97 | 243389 | T/C |
|
|
ELF3 | c.1466G>A | p.Ser489Asn | missense variant | moderate | contig97 | 244297 | G/A |
|
ELF3 | c.1966C>G | p.Pro656Ala | missense variant | moderate | contig97 | 244797 | C/G | |
ELF3 | c.2140C>T | p.Pro714Ser | missense variant | moderate | contig97 | 244971 | C/T | |
ELF3 | c.2141C>G | p.Pro714Arg | missense variant | moderate | contig97 | 244972 | C/G | |
ELF3 | c.2198G>T | p.Arg733Leu | missense variant | moderate | contig97 | 245029 | G/T | |
ELF3 |
c.2212_2217d |
p.His738_His |
conservative inframe insertion | moderate | contig97 | 245033 | T/TCATCAC |
|
aPT4 | c.80A>G | p.Lys27Arg | missense variant | moderate | contig121 | 2828736 | A/G |
|
aPT4 | c.97T>C | p.Tyr33His | missense variant | moderate | contig121 | 2828753 | T/C |
|
aPT4 | c.153A>C | p.Lys51Asn | missense variant | moderate | contig121 | 2828809 | A/C |
|
aPT4 | c.198A>C | p.Lys66Asn | missense variant | moderate | contig121 | 2828854 | A/C |
|
aPT4 | c.202T>A | p.Leu68Ile | missense variant | moderate | contig121 | 2828858 | T/A |
|
aPT4 |
c.235_236del |
p.Val79fs | frameshift variant | high | contig121 | 2829030 | ATG/A |
|
aPT4 | c.238delT | p.Ser80fs | frameshift variant | high | contig121 | 2829034 | AT/A |
|
aPT4 | c.916C>T | p.His306Tyr | missense variant & splice region variant | moderate | contig121 | 2832711 | C/T |
|
aPT4 | c.1168T>C | p.Tyr390His | missense variant | moderate | contig121 | 2833503 | T/C |
|
aPT1 |
c.95_97delGT |
p.Cys32del | disruptive inframe deletion | moderate | contig121 | 2835800 | ATGT/A | |
aPT1 | c.160A>C | p.Thr54Pro | missense variant | moderate | contig121 | 2835867 | A/C | |
aPT1 | c.406A>G | p.Ile136Val | missense variant | moderate | contig121 | 2839605 | A/G | |
aPT1 | c.670T>A | p.Ser224Thr | missense variant | moderate | contig121 | 2840278 | T/A |
|
aPT1 | c.727G>T | p.Glu243* | stop gained | high | contig121 | 2841362 | G/T | |
aPT1 | c.864C>G | p.Asn288Lys | missense variant | moderate | contig121 | 2842407 | C/G | |
AAE1-2 | c.205T>A | p.Ser69Thr | missense variant | moderate | contig81 | 209167 | T/A |
|
AAE1-2 | c.331A>G | p.Asn111Asp | missense variant | moderate | contig81 | 209293 | A/G |
|
AAE1-2 | c.1006A>G | p.Lys336Glu | missense variant | moderate | contig81 | 209968 | A/G |
|
AAE1-2 | c.1415G>A | p.Ser472Asn | missense variant | moderate | contig81 | 210377 | G/A |
|
AAE1-2 | c.1417A>G | p.Thr473Ala | missense variant | moderate | contig81 | 210379 | A/G |
|
AAE1-2 | c.1434G>T | p.Glu478Asp | missense variant | moderate | contig81 | 210396 | G/T |
|
AAE1-2 | c.1541T>C | p.Val514Ala | missense variant | moderate | contig81 | 210503 | T/C |
|
PHL-1 | c.2623A>G | p.Thr875Ala | missense variant | moderate | contig1439 | 1487174 | T/C |
|
PHL-1 | c.2551A>G | p.Thr851Ala | missense variant | moderate | contig1439 | 1487246 | T/C | |
PHL-1 | c.1387A>G | p.Thr463Ala | missense variant | moderate | contig1439 | 1489811 | T/C | |
TFL1 | c.302-1G>A | splice acceptor variant & intron variant | high | contig1636 | 520616 | C/T | ||
HDS-1 | c.1618A>G | p.Ile540Val | missense variant | moderate | contig1891 | 885936 | T/C | |
HDS-1 | c.1378G>A | p.Val460Ile | missense variant | moderate | contig1891 | 886370 | C/T |
|
HDS-1 |
c.-108+1_-10 |
splice donor variant & intron variant | high | contig1891 | 889975 | A/AC |
|
|
FAD2 | c.124C>A | p.Pro42Thr | missense variant | moderate | contig1460 | 1084136 | G/T |
|
PIE1-2 | c.6653A>G | p.Asn2218Ser | missense variant | moderate | contig1460 | 1184434 | T/C | |
PIE1-2 | c.5932A>G | p.Ile1978Val | missense variant | moderate | contig1460 | 1185552 | T/C | |
PIE1-2 | c.5884G>A | p.Gly1962Ser | missense variant | moderate | contig1460 | 1185715 | C/T | |
PIE1-2 | c.3554G>A | p.Arg1185Lys | missense variant | moderate | contig1460 | 1188486 | C/T | |
PIE1-2 | c.3506A>C | p.Glu1169Ala | missense variant | moderate | contig1460 | 1188534 | T/G | |
PIE1-2 | c.3505G>A | p.Glu1169Lys | missense variant | moderate | contig1460 | 1188535 | C/T |
|
PIE1-2 |
c.2083_2085d |
p.Val695del | conservative inframe deletion | moderate | contig1460 | 1189954 | GGAC/G | |
PIE1-2 | c.2072A>G | p.His691Arg | missense variant | moderate | contig1460 | 1189968 | T/C | |
PIE1-2 | c.2027A>T | p.Gln676Leu | missense variant | moderate | contig1460 | 1190013 | T/A | |
PIE1-2 | c.1872T>A | p.Asp624Glu | missense variant | moderate | contig1460 | 1190252 | A/T | |
PIE1-2 | c.1846A>G | p.Lys616Glu | missense variant | moderate | contig1460 | 1190278 | T/C |
|
PIE1-2 | c.1656T>G | p.Asn552Lys | missense variant | moderate | contig1460 | 1191574 | A/C | |
PIE1-2 | c.1630G>C | p.Ala544Pro | missense variant | moderate | contig1460 | 1191600 | C/G | |
PIE1-2 | c.1289A>G | p.Asp430Gly | missense variant | moderate | contig1460 | 1192109 | T/C |
|
PIE1-2 | c.1156T>G | p.Trp386Gly | missense variant | moderate | contig1460 | 1192242 | A/C | |
PIE1-2 |
c.1019_1048d |
p.Asn340_Asp |
conservative inframe insertion | moderate | contig1460 | 1192349 |
C/CTATCCTCCA |
|
PIE1-2 | c.982G>A | p.Glu328Lys | missense variant | moderate | contig1460 | 1192416 | C/T | |
PIE1-2 | c.710C>T | p.Pro237Leu | missense variant | moderate | contig1460 | 1193804 | G/A | |
PIE1-2 | c.706T>C | p.Tyr236His | missense variant | moderate | contig1460 | 1193808 | A/G | |
PIE1-2 | c.637T>A | p.Ser213Thr | missense variant | moderate | contig1460 | 1194421 | A/T | |
EMF2 | c.434C>T | p.Ser145Phe | missense variant | moderate | contig954 | 3049270 | C/T | |
EMF2 | c.1772A>G | p.Gln591Arg | missense variant | moderate | contig954 | 3059929 | A/G | |
EMF1-1 |
c.627_629dup |
p.Val210dup | disruptive inframe insertion | moderate | contig883 | 270231 | A/ATGT |
|
FT |
c.38_43dupAT |
p.Asn13_Asn1 |
disruptive inframe insertion | moderate | contig1561 | 3124441 | T/TTAATAA |
|
FT |
c.35_43dupAT |
p.Asn12_Asn1 |
disruptive inframe insertion | moderate | contig1561 | 3124441 | T/TTAATAATAA |
|
FT | c.240C>G | p.Asn80Lys | missense variant | moderate | contig1561 | 3124664 | C/G |
|
FT |
c.259+1_259+ |
splice donor variant & intron variant | high | contig1561 | 3124684 | G/GTA | ||
AAE1-3 | c.634G>C | p.Gly212Arg | missense variant | moderate | contig976 | 1083220 | C/G |
|
AAE1-3 | c.416T>C | p.Leu139Pro | missense variant | moderate | contig976 | 1083609 | A/G |
|
AAE1-3 | c.382T>C | p.Tyr128His | missense variant | moderate | contig976 | 1083643 | A/G |
|
AAE1-3 | c.327G>A | p.Trp109* | stop gained | high | contig976 | 1083698 | C/T |
|
AAE1-3 | c.293A>G | p.Asp98Gly | missense variant | moderate | contig976 | 1083732 | T/C |
|
AAE1-3 | c.287C>T | p.Thr96Ile | missense variant | moderate | contig976 | 1083738 | G/A |
|
AAE1-3 | c.215A>T | p.Glu72Val | missense variant | moderate | contig976 | 1083860 | T/A |
|
AAE1-3 | c.167A>G | p.Glu56Gly | missense variant | moderate | contig976 | 1083908 | T/C |
|
AAE1-3 | c.141A>G | p.Ile47Met | missense variant | moderate | contig976 | 1083934 | T/C |
|
AAE1-3 | c.125A>G | p.Glu42Gly | missense variant | moderate | contig976 | 1083950 | T/C |
|
AAE1-3 | c.79A>G | p.Thr27Ala | missense variant | moderate | contig976 | 1083996 | T/C |
|
AAE1-3 | c.52G>A | p.Gly18Ser | missense variant | moderate | contig976 | 1084023 | C/T |
|
PIE1-1 | c.773A>G | p.Asn258Ser | missense variant & splice region variant | moderate | contig1225 | 2279897 | A/G | |
PIE1-1 | c.1222C>G | p.Gln408Glu | missense variant | moderate | contig1225 | 2281482 | C/G | |
PIE1-1 | c.1758T>G | p.Asn586Lys | missense variant | moderate | contig1225 | 2282186 | T/G | |
PIE1-1 | c.3607G>A | p.Glu1203Lys | missense variant | moderate | contig1225 | 2285222 | G/A |
|
PIE1-1 | c.3608A>C | p.Glu1203Ala | missense variant | moderate | contig1225 | 2285223 | A/C | |
PIE1-1 | c.3619G>A | p.Val1207Met | missense variant | moderate | contig1225 | 2285234 | G/A |
|
PIE1-1 | c.3656G>A | p.Arg1219Lys | missense variant | moderate | contig1225 | 2285271 | G/A | |
GGR | c.32C>A | p.Thr11Lys | missense variant | moderate | contig2282 | 549024 | C/A |
|
GGR | c.317C>T | p.Pro106Leu | missense variant | moderate | contig2282 | 549309 | C/T | |
GGR |
c.358_359del |
p.Ala120fs | frameshift variant | high | contig2282 | 549348 | ACG/A |
|
GGR | c.382C>T | p.Leu128Phe | missense variant | moderate | contig2282 | 549374 | C/T |
|
GGR | c.541G>A | p.Val181Ile | missense variant | moderate | contig2282 | 549533 | G/A |
|
GGR | c.704A>T | p.His235Leu | missense variant | moderate | contig2282 | 549696 | A/T |
|
PKSB-3 | c.721G>A | p.Ala241Thr | missense variant | moderate | contig93 | 3337039 | G/A |
|
Nearest genetic relatives (All Samples)
- 0.203 Tisza (RSP11045)
- 0.205 Tisza (RSP11044)
- 0.207 Tisza (RSP10659)
- 0.220 Carmagnola USO 31 (RSP11204)
- 0.221 Fedora 17 (RSP11203)
- 0.225 Santhica 27 (RSP10665)
- 0.225 Carmagnola (RSP11202)
- 0.229 Carmagnola (RSP10978)
- 0.232 Futura 75 (RSP10664)
- 0.232 Carmagnola (RSP10980)
- 0.234 Fedora 17 (RSP10661)
- 0.235 Carmagnola (RSP10982)
- 0.237 Carmagnola (RSP11039)
- 0.238 Lovrin (RSP10658)
- 0.238 Carmagnola (RSP11037)
- 0.238 Carmagnola (RSP10979)
- 0.239 Feral (RSP11206)
- 0.240 Carmagnola (RSP10976)
- 0.241 Santhica27 (RSP11047)
- 0.242 Eletta Campana (RSP11209)
Nearest genetic relatives (Base Tree)
- 0.199 Tisza (RSP11044)
- 0.201 Tisza (RSP10659)
- 0.232 Carmagnola (RSP10979)
- 0.232 Futura 75 (RSP10664)
- 0.235 Santhica27 (RSP11047)
- 0.236 Carmagnola (RSP11037)
- 0.237 Fedora 17 (RSP10661)
- 0.240 Tygra (RSP10667)
- 0.243 Lovrin (RSP10658)
- 0.245 Feral (RSP10890)
- 0.250 Ivory (RSP10668)
- 0.253 Monoica (RSP10241)
- 0.260 USO 31 (RSP10981)
- 0.263 Kyrgyz Gold (RSP11054)
- 0.278 KYRG-11 (RSP11051)
- 0.299 Jiangji (RSP10653)
- 0.311 Kimbo Slice (RSP10997)
- 0.313 RKM-2018-029 (RSP11121)
- 0.321 Recon (RSP10755)
- 0.335 Liberty Haze (RSP11000)
Most genetically distant strains (All Samples)
- 0.450 JL yellow (RSP11075)
- 0.446 Cherry Blossom (RSP11318)
- 0.442 Cherry Blossom (RSP11323)
- 0.436 JL 3rd Gen Mother (RSP11214)
- 0.434 Cherry Blossom (RSP11300)
- 0.433 AVIDEKEL 2 0 (RSP11174)
- 0.430 Cherry Blossom (RSP11301)
- 0.426 Cherry Blossom (RSP11312)
- 0.426 JL 3rd Gen Mother (RSP11197)
- 0.425 Unknown- Cherry Wine - 001 (RSP11268)
- 0.421 Cherry Blossom (RSP11328)
- 0.418 Cherry Blossom (RSP11298)
- 0.414 Cbot-2019-005 (RSP11133)
- 0.413 Cherry Blossom (RSP11309)
- 0.413 Unknown- Cherry Wine - 002 (RSP11269)
- 0.412 Wife (RSP11148)
- 0.412 JL 4th Gen 2 (RSP11194)
- 0.410 Lemon Skunk (RSP11229)
- 0.410 Queen Dream (RSP11278)
- 0.409 Skunk 18 (RSP11030)
Most genetically distant strains (Base Tree)
- 0.450 JL yellow (RSP11075)
- 0.426 Cbot-2019-005 (RSP11133)
- 0.405 Kush Hemp E1 (RSP11128)
- 0.402 RKM-2018-006 (RSP11097)
- 0.401 RKM-2018-002 (RSP11093)
- 0.401 Skunk 18 (RSP11038)
- 0.398 RKM-2018-028 (RSP11120)
- 0.389 RKM-2018-023 (RSP11115)
- 0.389 Sour Raspberry (RSP10551)
- 0.389 RKM-2018-018 (RSP11110)
- 0.386 Cbot-2019-004 (RSP11132)
- 0.385 UP Sunrise (RSP10989)
- 0.384 RKM-2018-003 (RSP11094)
- 0.384 Blue Dream (RSP11033)
- 0.383 Cbot-2019-001 (RSP11129)
- 0.383 RKM-2018-027 (RSP11119)
- 0.379 RKM-2018-022 (RSP11114)
- 0.378 Gold Cracker (RSP11048)
- 0.376 RKM-2018-009 (RSP11100)
- 0.375 Hermaphrodite Research Sample1 (RSP11049)
Nearest genetic relative in Phylos dataset
- Overlapping SNPs:
- 101
- Concordance:
- 66
Nearest genetic relative in Lynch dataset
- Overlapping SNPs:
- 12
- Concordance:
- 11
Blockchain Registration Information
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6e12ff7cf165b60d
8f9a631be96ec138 53333d87135a2627 546db1d1ded5d3cd - Stamping Certificate
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