Queen Dream CBG

RSP 11295

Grower: Yabba Cannaba

General Information

Sample Name
LD6
Accession Date
October 9, 2019
Reported Plant Sex
Female

The strain rarity visualization shows how distant the strain is from the other cultivars in the Kannapedia database. The y-axis represents genetic distance, getting farther as you go up. The width of the visualization at any position along the y-axis shows how many strains there are in the database at that genetic distance. So, a common strain will have a more bottom-heavy shape, while uncommon and rare cultivars will have a visualization that is generally shifted towards the top.

Rarity: Rare
Most Distant Most Similar

Chemical Information

Cannabinoid and terpenoid information provided by the grower.

Cannabinoids

No information provided.

Terpenoids

No information provided.

Genetic Information

Plant Type
Type III

The bell curve in the heterozygosity visualization shows the distribution of heterozygosity levels for cannabis cultivars in the Kannapedia database. The green line shows where this particular strain fits within the distribution. Heterozygosity is associated with heterosis (aka hybrid vigor) but also leads to the production of more variable offspring. When plants have two genetically different parents, heterozygosity levels will be higher than if it has been inbred or backcrossed repeatedly.

Heterozygosity: 0.95%
Least Heterozygous Most Heterozygous

The ratio of reads mapped to Y-contigs to reads mapped to the whole Cannabis genome (Y-ratios) has been demonstrated to be strongly correlated with plant sex typing. This plot shows the distribution of Y-ratios for all samples in our database which were sequenced with the same method (panel or WGS) as this sample and where this sample falls in the distribution.

Y-Ratio Distribution: 0.0420
male female RSP11295

This chart represents the Illumina sequence coverage over the Bt/Bd allele. These are the three regions in the cannabis genome that impact THCA, CBDA, CBGA production. Coverage over the Active CBDAS gene is highly correlated with Type II and Type III plants as described by Etienne de Meijer. Coverage over the THCA gene is highly correlated with Type I and Type II plants but is anti-correlated with Type III plants. Type I plants require coverage over the inactive CBDA loci and no coverage over the Active CBDA gene. Lack of coverage over the Active CBDA and Active THCA allele are presumed to be Type IV plants (CBGA dominant). While deletions of entire THCAS and CBDAS genes are the most common Bt:Bd alleles observed, it is possible to have plants with these genes where functional expression of the enzyme is disrupted by deactivating point mutations (Kojoma et al. 2006).

Bt/Bd Allele Coverage

This chart represents the Illumina sequence coverage over the CBCA synthase gene.

CBCAS Coverage

Variants (THCAS, CBDAS, and CBCAS)

No variants to report

Variants (Select Genes of Interest)

PKSG-4a

UniProt

c.493G>A p.Gly165Ser missense variant moderate contig700 1937904

IGV: Start, Jump

G/A
NGS:
0.103
C90:
0.000
PKSG-4a

UniProt

c.1191_1193delTTA p.Tyr398del disruptive inframe deletion moderate contig700 1938600

IGV: Start, Jump

AATT/A
NGS:
0.167
C90:
0.000
PKSG-2a

UniProt

c.67T>A p.Phe23Ile missense variant moderate contig700 1945567

IGV: Start, Jump

A/T
NGS:
0.825
C90:
0.904
PKSG-2a

UniProt

c.31A>T p.Thr11Ser missense variant moderate contig700 1945603

IGV: Start, Jump

T/A
NGS:
0.763
C90:
0.876
PKSG-2b

UniProt

c.1152T>A p.Asn384Lys missense variant moderate contig700 1950486

IGV: Start, Jump

A/T
NGS:
0.715
C90:
0.895
PKSG-2b

UniProt

c.1132C>G p.Leu378Val missense variant moderate contig700 1950506

IGV: Start, Jump

G/C
NGS:
0.717
C90:
0.000
PKSG-2b

UniProt

c.1117A>G p.Ile373Val missense variant moderate contig700 1950521

IGV: Start, Jump

T/C
NGS:
0.807
C90:
0.981
PKSG-2b

UniProt

c.948T>G p.Asp316Glu missense variant moderate contig700 1950690

IGV: Start, Jump

A/C
NGS:
0.456
C90:
0.000
PKSG-2b

UniProt

c.945T>G p.Ser315Arg missense variant moderate contig700 1950693

IGV: Start, Jump

A/C
NGS:
0.454
C90:
0.000
PKSG-2b

UniProt

c.944G>A p.Ser315Asn missense variant moderate contig700 1950694

IGV: Start, Jump

C/T
NGS:
0.445
C90:
0.000
PKSG-2b

UniProt

c.934C>G p.His312Asp missense variant moderate contig700 1950704

IGV: Start, Jump

G/C
NGS:
0.410
C90:
0.000
PKSG-2b

UniProt

c.774G>A p.Met258Ile missense variant moderate contig700 1950864

IGV: Start, Jump

C/T
NGS:
0.366
C90:
0.947
PKSG-2b

UniProt

c.31A>T p.Thr11Ser missense variant moderate contig700 1951851

IGV: Start, Jump

T/A
NGS:
0.844
C90:
0.880
PKSG-2b

UniProt

c.-2_1dupATA start lost & conservative inframe insertion high contig700 1951880

IGV: Start, Jump

A/ATAT
NGS:
0.410
C90:
0.000
PKSG-4b

UniProt

c.556A>G p.Arg186Gly missense variant & splice region variant moderate contig700 2721117

IGV: Start, Jump

T/C
NGS:
0.022
C90:
0.000
PKSG-4b

UniProt

c.496A>G p.Lys166Glu missense variant moderate contig700 2721177

IGV: Start, Jump

T/C
NGS:
0.651
C90:
0.684
PKSG-4b

UniProt

c.489delT p.Phe163fs frameshift variant high contig700 2721183

IGV: Start, Jump

CA/C
NGS:
0.792
C90:
0.761
PKSG-4b

UniProt

c.485A>G p.Lys162Arg missense variant moderate contig700 2721188

IGV: Start, Jump

T/C
NGS:
0.643
C90:
0.301
PKSG-4b

UniProt

c.431T>G p.Val144Gly missense variant moderate contig700 2721242

IGV: Start, Jump

A/C
NGS:
0.575
C90:
0.679
PKSG-4b

UniProt

c.352_355delACAG p.Thr118fs frameshift variant high contig700 2721317

IGV: Start, Jump

CCTGT/C
NGS:
0.529
C90:
0.000
PKSG-4b

UniProt

c.324A>C p.Glu108Asp missense variant moderate contig700 2721349

IGV: Start, Jump

T/G
NGS:
0.094
C90:
0.000
PKSG-4b

UniProt

c.323A>G p.Glu108Gly missense variant moderate contig700 2721350

IGV: Start, Jump

T/C
NGS:
0.469
C90:
0.000
aPT4

UniProt

c.97T>C p.Tyr33His missense variant moderate contig121 2828753

IGV: Start, Jump

T/C
NGS:
0.439
C90:
0.000
aPT4

UniProt

c.153A>C p.Lys51Asn missense variant moderate contig121 2828809

IGV: Start, Jump

A/C
NGS:
0.375
C90:
0.000
aPT4

UniProt

c.235_236delGT p.Val79fs frameshift variant high contig121 2829030

IGV: Start, Jump

ATG/A
NGS:
0.417
C90:
0.000
aPT4

UniProt

c.238delT p.Ser80fs frameshift variant high contig121 2829034

IGV: Start, Jump

AT/A
NGS:
0.421
C90:
0.000
aPT4

UniProt

c.302A>G p.Asn101Ser missense variant moderate contig121 2829099

IGV: Start, Jump

A/G
NGS:
0.349
C90:
0.000
aPT4

UniProt

c.1168T>C p.Tyr390His missense variant moderate contig121 2833503

IGV: Start, Jump

T/C
NGS:
0.546
C90:
0.000
aPT1

UniProt

c.629C>T p.Thr210Ile missense variant moderate contig121 2840237

IGV: Start, Jump

C/T
NGS:
0.561
C90:
0.598
HDS-2

UniProt

c.82_93delGTAACCGGAACT p.Val28_Thr31del conservative inframe deletion moderate contig95 1989748

IGV: Start, Jump

CGTAACCGGAACT/C
NGS:
0.805
C90:
0.000
HDS-2

UniProt

c.127T>G p.Ser43Ala missense variant moderate contig95 1989794

IGV: Start, Jump

T/G
NGS:
0.721
C90:
0.000

Nearest genetic relatives (All Samples)

0 0.067 0.133 0.200 0.267
clone distance sibling distance more distant
  1. 0.180 Queen Dream CBG (RSP11283)
  2. 0.193 Queen Dream CBG (RSP11294)
  3. 0.193 Queen Dream CBG (RSP11297)
  4. 0.208 Queen Dream (RSP11291)
  5. 0.214 Queen Dream CBG (RSP11280)
  6. 0.216 Queen Dream (RSP11289)
  7. 0.217 Queen Dream (RSP11278)
  8. 0.219 Hot Blonde (RSP11292)
  9. 0.220 Doug s Varin (RSP11243)
  10. 0.224 Queen Dream CBG (RSP11275)
  11. 0.226 UP Sunrise (RSP10989)
  12. 0.229 Queen Dream CBG (RSP11279)
  13. 0.230 TI (RSP11149)
  14. 0.232 Queen Dream CBG (RSP11286)
  15. 0.236 CANNATONIC (RSP11349)
  16. 0.238 Blueberry Cheesecake (RSP10684)
  17. 0.239 Serious Happiness (RSP10763)
  18. 0.240 Avidekel (RSP10938)
  19. 0.241 RINGO S ANGEL (RSP10085)
  20. 0.244 FL30 (RSP11361)

Nearest genetic relatives (Base Tree)

0 0.083 0.167 0.250 0.333
clone distance sibling distance more distant
  1. 0.246 Blueberry Cheesecake (RSP10684)
  2. 0.251 UP Sunrise (RSP10989)
  3. 0.255 Liberty Haze (RSP11000)
  4. 0.272 RKM-2018-028 (RSP11120)
  5. 0.274 Cbot-2019-001 (RSP11129)
  6. 0.274 QUEEN JESUS (RSP10105)
  7. 0.286 RKM-2018-020 (RSP11112)
  8. 0.289 Durban Poison (RSP11014)
  9. 0.290 Cbot-2019-005 (RSP11133)
  10. 0.306 RKM-2018-018 (RSP11110)
  11. 0.311 RKM-2018-006 (RSP11097)
  12. 0.313 Cbot-2019-004 (RSP11132)
  13. 0.319 RKM-2018-022 (RSP11114)
  14. 0.319 Cbot-2019-006 (RSP11134)
  15. 0.320 Hermaphrodite Research Sample1 (RSP11049)
  16. 0.322 Blueberry Cheesecake (RSP10672)
  17. 0.326 Gold Cracker (RSP11048)
  18. 0.328 RKM-2018-019 (RSP11111)
  19. 0.328 Golden Goat 2 (RSP10991)
  20. 0.330 Kimbo Slice (RSP10997)

Most genetically distant strains (All Samples)

0 0.125 0.250 0.375 0.500
clone distance sibling distance more distant
  1. 0.477 80E (RSP11213)
  2. 0.475 80E (RSP11211)
  3. 0.457 Cherry Blossom (RSP11317)
  4. 0.456 Cherry Blossom (RSP11330)
  5. 0.446 80E (RSP11212)
  6. 0.437 Cherry Blossom (RSP11328)
  7. 0.425 White Label 1 (RSP11336)
  8. 0.424 JL yellow (RSP11075)
  9. 0.423 Cherry Blossom (RSP11324)
  10. 0.422 Monoica (RSP10241)
  11. 0.420 USO31 (RSP10233)
  12. 0.417 JL 4th Gen 2 (RSP11194)
  13. 0.416 Cherry Blossom (RSP11334)
  14. 0.416 Santhica27 (RSP11047)
  15. 0.415 Chem 91 (RSP11185)
  16. 0.413 Carmaleonte (RSP11207)
  17. 0.412 Unknown- Cherry Wine - 004 (RSP11271)
  18. 0.412 Cherry Blossom CBG (RSP11303)
  19. 0.411 Carmagnola (RSP11202)
  20. 0.411 Diana (RSP10235)

Most genetically distant strains (Base Tree)

0 0.108 0.217 0.325 0.433
clone distance sibling distance more distant
  1. 0.424 Monoica (RSP10241)
  2. 0.419 Santhica27 (RSP11047)
  3. 0.417 JL yellow (RSP11075)
  4. 0.415 Carmagnola (RSP11037)
  5. 0.404 Ivory (RSP10668)
  6. 0.404 Feral (RSP10890)
  7. 0.396 Skywalker OG (RSP10837)
  8. 0.393 RKM-2018-026 (RSP11118)
  9. 0.393 Carmagnola (RSP10979)
  10. 0.390 RKM-2018-034 (RSP11126)
  11. 0.386 Futura 75 (RSP10664)
  12. 0.385 Lovrin (RSP10658)
  13. 0.385 RKM-2018-002 (RSP11093)
  14. 0.384 Kyrgyz Gold (RSP11054)
  15. 0.384 USO 31 (RSP10981)
  16. 0.380 KYRG-11 (RSP11051)
  17. 0.377 Fedora 17 (RSP10661)
  18. 0.377 Tisza (RSP11044)
  19. 0.370 Jiangji (RSP10653)
  20. 0.368 Blueberry Cheesecake (RSP10680)

Nearest genetic relative in Phylos dataset

Phylos Strain SRR4448205
Overlapping SNPs:
70
Concordance:
46

Nearest genetic relative in Lynch dataset

Lynch Strain SRR3495320
Overlapping SNPs:
10
Concordance:
10

Blockchain Registration Information

Transaction ID
5c965584599f4995a93142372c5c231c5913313ecf9e4fee65c2e85866101bbb
Stamping Certificate
Download PDF (858.1 KB)
SHASUM Hash
435536e2cb1ca76993ed039787e72891655beef86cdfde4ace2b4175a116babf
QR code for RSP11295

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