Cherry Blossom CBG
RSP 11303
Grower: Yabba Cannaba
General Information
- Sample Name
- CJ2
- Accession Date
- October 16, 2019
- Reported Plant Sex
- Female
- Report Type
- StrainSEEK v2 3.2Mb
The strain rarity visualization shows how distant the strain is from the other cultivars in the Kannapedia database. The y-axis represents genetic distance, getting farther as you go up. The width of the visualization at any position along the y-axis shows how many strains there are in the database at that genetic distance. So, a common strain will have a more bottom-heavy shape, while uncommon and rare cultivars will have a visualization that is generally shifted towards the top.
Chemical Information
Cannabinoid and terpenoid information provided by the grower.
Cannabinoids
No information provided.
Terpenoids
No information provided.
Genetic Information
- Plant Type
- Type III
File Downloads
The bell curve in the heterozygosity visualization shows the distribution of heterozygosity levels for cannabis cultivars in the Kannapedia database. The green line shows where this particular strain fits within the distribution. Heterozygosity is associated with heterosis (aka hybrid vigor) but also leads to the production of more variable offspring. When plants have two genetically different parents, heterozygosity levels will be higher than if it has been inbred or backcrossed repeatedly.
The ratio of reads mapped to Y-contigs to reads mapped to the whole Cannabis genome (Y-ratios) has been demonstrated to be strongly correlated with plant sex typing. This plot shows the distribution of Y-ratios for all samples in our database which were sequenced with the same method (panel or WGS) as this sample and where this sample falls in the distribution.

This chart represents the Illumina sequence coverage over the Bt/Bd allele. These are the three regions in the cannabis genome that impact THCA, CBDA, CBGA production. Coverage over the Active CBDAS gene is highly correlated with Type II and Type III plants as described by Etienne de Meijer. Coverage over the THCA gene is highly correlated with Type I and Type II plants but is anti-correlated with Type III plants. Type I plants require coverage over the inactive CBDA loci and no coverage over the Active CBDA gene. Lack of coverage over the Active CBDA and Active THCA allele are presumed to be Type IV plants (CBGA dominant). While deletions of entire THCAS and CBDAS genes are the most common Bt:Bd alleles observed, it is possible to have plants with these genes where functional expression of the enzyme is disrupted by deactivating point mutations (Kojoma et al. 2006).



This chart represents the Illumina sequence coverage over the CBCA synthase gene.

Variants (THCAS, CBDAS, and CBCAS)
No variants to report
Variants (Select Genes of Interest)
PKSG-2a | c.67T>A | p.Phe23Ile | missense variant | moderate | contig700 | 1945567 | A/T | |
PKSG-2a | c.31A>T | p.Thr11Ser | missense variant | moderate | contig700 | 1945603 | T/A | |
PKSG-2b | c.1132C>G | p.Leu378Val | missense variant | moderate | contig700 | 1950506 | G/C |
|
PKSG-2b | c.1117A>G | p.Ile373Val | missense variant | moderate | contig700 | 1950521 | T/C | |
PKSG-2b | c.31A>T | p.Thr11Ser | missense variant | moderate | contig700 | 1951851 | T/A | |
PKSG-4b | c.496A>G | p.Lys166Glu | missense variant | moderate | contig700 | 2721177 | T/C | |
PKSG-4b | c.489delT | p.Phe163fs | frameshift variant | high | contig700 | 2721183 | CA/C | |
PKSG-4b | c.485A>G | p.Lys162Arg | missense variant | moderate | contig700 | 2721188 | T/C | |
PKSG-4b | c.431T>G | p.Val144Gly | missense variant | moderate | contig700 | 2721242 | A/C | |
PKSG-4b | c.419A>G | p.Asp140Gly | missense variant | moderate | contig700 | 2721254 | T/C | |
PKSG-4b |
c.352_355del |
p.Thr118fs | frameshift variant | high | contig700 | 2721317 | CCTGT/C |
|
PKSG-4b | c.323A>G | p.Glu108Gly | missense variant | moderate | contig700 | 2721350 | T/C |
|
DXR-2 | c.1319T>C | p.Ile440Thr | missense variant | moderate | contig380 | 285250 | A/G |
|
aPT4 | c.97T>C | p.Tyr33His | missense variant | moderate | contig121 | 2828753 | T/C |
|
aPT4 |
c.235_236del |
p.Val79fs | frameshift variant | high | contig121 | 2829030 | ATG/A |
|
aPT4 | c.238delT | p.Ser80fs | frameshift variant | high | contig121 | 2829034 | AT/A |
|
aPT4 | c.302A>G | p.Asn101Ser | missense variant | moderate | contig121 | 2829099 | A/G |
|
aPT4 |
c.744+1_744+ |
splice donor variant & splice region variant & intron variant | high | contig121 | 2831022 |
GGTAATTTATTT |
|
Nearest genetic relatives (All Samples)
- 0.176 Unknown- Cherry Wine - 004 (RSP11271)
- 0.178 Cherry Blossom (RSP11306)
- 0.184 Cherry Blossom (RSP11320)
- 0.188 Unknown- Cherry Wine - 005 (RSP11272)
- 0.204 Cherry Blossom (RSP11329)
- 0.205 Cherry Blossom (RSP11313)
- 0.205 Cherry Blossom (RSP11325)
- 0.209 Cherry Blossom (RSP11299)
- 0.210 Cherry Blossom (RSP11315)
- 0.225 Cherry Blossom (RSP11304)
- 0.227 Cherry Blossom (RSP11309)
- 0.228 Cherry Blossom (RSP11332)
- 0.228 Cherry Blossom (RSP11322)
- 0.234 Cherry Blossom (RSP11298)
- 0.240 Cherry Blossom (RSP11330)
- 0.246 Cherry Blossom (RSP11324)
- 0.248 Cherry Blossom (RSP11317)
- 0.259 Unknown- Cherry Wine - 003 (RSP11270)
- 0.260 Cherry Blossom (RSP11316)
- 0.264 Cherry Blossom (RSP11327)
Nearest genetic relatives (Base Tree)
- 0.278 Blueberry Cheesecake (RSP10684)
- 0.304 Liberty Haze (RSP11000)
- 0.317 UP Sunrise (RSP10989)
- 0.322 Cbot-2019-004 (RSP11132)
- 0.335 Tygra (RSP10667)
- 0.344 Durban Poison (RSP11014)
- 0.349 Hermaphrodite ResearchSample2 (RSP11050)
- 0.351 Recon (RSP10755)
- 0.357 Kimbo Slice (RSP10997)
- 0.360 The Gift (RSP10988)
- 0.363 CST (RSP11002)
- 0.373 RKM-2018-033 (RSP11125)
- 0.375 RKM-2018-029 (RSP11121)
- 0.378 Cbot-2019-001 (RSP11129)
- 0.380 RKM-2018-005 (RSP11096)
- 0.382 QUEEN JESUS (RSP10105)
- 0.383 Gold Cracker (RSP11048)
- 0.384 RKM-2018-031 (RSP11123)
- 0.385 Kyrgyz Gold (RSP11054)
- 0.386 KYRG-11 (RSP11051)
Most genetically distant strains (All Samples)
- 0.478 JL 2 (RSP11076)
- 0.471 Cherry Blossom (RSP11318)
- 0.470 RKM-2018-022 (RSP11114)
- 0.462 White Label 1 (RSP11336)
- 0.443 RKM-2018-024 (RSP11116)
- 0.443 Escape Velocity (RSP11165)
- 0.442 Star Dawg (RSP11352)
- 0.441 Chem 91 (RSP11185)
- 0.441 RKM-2018-019 (RSP11111)
- 0.440 JL 4th Gen 2 (RSP11194)
- 0.436 RKM-2018-030 (RSP11122)
- 0.435 Blueberry Cheesecake (RSP10672)
- 0.435 Tangerine Haze (RSP10995)
- 0.433 RKM-2018-018 (RSP11110)
- 0.432 CS (RSP11208)
- 0.431 Abacus (RSP11266)
- 0.430 RKM-2018-002 (RSP11093)
- 0.429 Green Crack (RSP11339)
- 0.429 Black Beauty (RSP11035)
- 0.428 Garlic (RSP11341)
Most genetically distant strains (Base Tree)
- 0.476 RKM-2018-022 (RSP11114)
- 0.446 RKM-2018-019 (RSP11111)
- 0.440 Blueberry Cheesecake (RSP10672)
- 0.437 RKM-2018-018 (RSP11110)
- 0.435 JL yellow (RSP11075)
- 0.433 Hermaphrodite Research Sample1 (RSP11049)
- 0.430 Black Beauty (RSP11035)
- 0.429 Sour Raspberry (RSP10551)
- 0.427 RKM-2018-002 (RSP11093)
- 0.426 RKM-2018-028 (RSP11120)
- 0.422 RKM-2018-006 (RSP11097)
- 0.418 RKM-2018-023 (RSP11115)
- 0.416 Cherry (RSP11142)
- 0.413 Skunk 18 (RSP11038)
- 0.412 RKM-2018-034 (RSP11126)
- 0.412 Skywalker OG (RSP10837)
- 0.412 USO 31 (RSP10981)
- 0.411 Carmagnola (RSP11037)
- 0.410 RKM-2018-026 (RSP11118)
- 0.410 Italian Kiss (RSP11034)
Nearest genetic relative in Phylos dataset
- Overlapping SNPs:
- 63
- Concordance:
- 36
Nearest genetic relative in Lynch dataset
- Overlapping SNPs:
- 3
- Concordance:
- 3
Blockchain Registration Information
- Transaction ID
-
335520f02423995a
c9541f03afeb33f3 dd1a2f46395d9a01 ef66b7a3b854e866 - Stamping Certificate
- Download PDF (861.8 KB)
- SHASUM Hash
-
39a974d2d387cbfd
3f24f2d651c178e6 4dfe81ade46113ee 8ea74f8ca7ff57da