Cherry Blossom
RSP 11315
Grower: Yabba Cannaba
General Information
- Sample Name
- CD5
- Accession Date
- October 16, 2019
- Reported Plant Sex
- Female
- Report Type
- StrainSEEK v2 3.2Mb
The strain rarity visualization shows how distant the strain is from the other cultivars in the Kannapedia database. The y-axis represents genetic distance, getting farther as you go up. The width of the visualization at any position along the y-axis shows how many strains there are in the database at that genetic distance. So, a common strain will have a more bottom-heavy shape, while uncommon and rare cultivars will have a visualization that is generally shifted towards the top.
Chemical Information
Cannabinoid and terpenoid information provided by the grower.
Cannabinoids
No information provided.
Terpenoids
No information provided.
Genetic Information
- Plant Type
- Type III
File Downloads
The bell curve in the heterozygosity visualization shows the distribution of heterozygosity levels for cannabis cultivars in the Kannapedia database. The green line shows where this particular strain fits within the distribution. Heterozygosity is associated with heterosis (aka hybrid vigor) but also leads to the production of more variable offspring. When plants have two genetically different parents, heterozygosity levels will be higher than if it has been inbred or backcrossed repeatedly.
The ratio of reads mapped to Y-contigs to reads mapped to the whole Cannabis genome (Y-ratios) has been demonstrated to be strongly correlated with plant sex typing. This plot shows the distribution of Y-ratios for all samples in our database which were sequenced with the same method (panel or WGS) as this sample and where this sample falls in the distribution.

This chart represents the Illumina sequence coverage over the Bt/Bd allele. These are the three regions in the cannabis genome that impact THCA, CBDA, CBGA production. Coverage over the Active CBDAS gene is highly correlated with Type II and Type III plants as described by Etienne de Meijer. Coverage over the THCA gene is highly correlated with Type I and Type II plants but is anti-correlated with Type III plants. Type I plants require coverage over the inactive CBDA loci and no coverage over the Active CBDA gene. Lack of coverage over the Active CBDA and Active THCA allele are presumed to be Type IV plants (CBGA dominant). While deletions of entire THCAS and CBDAS genes are the most common Bt:Bd alleles observed, it is possible to have plants with these genes where functional expression of the enzyme is disrupted by deactivating point mutations (Kojoma et al. 2006).



This chart represents the Illumina sequence coverage over the CBCA synthase gene.

Variants (THCAS, CBDAS, and CBCAS)
No variants to report
Variants (Select Genes of Interest)
GPPs1 |
c.845_848del |
p.Glu282fs | frameshift variant | high | contig676 | 169629 | TGAAA/T |
|
PKSG-4a | c.493G>A | p.Gly165Ser | missense variant | moderate | contig700 | 1937904 | G/A |
|
PKSG-4a |
c.1191_1193d |
p.Tyr398del | disruptive inframe deletion | moderate | contig700 | 1938600 | AATT/A |
|
PKSG-2a | c.67T>A | p.Phe23Ile | missense variant | moderate | contig700 | 1945567 | A/T | |
PKSG-2a | c.31A>T | p.Thr11Ser | missense variant | moderate | contig700 | 1945603 | T/A | |
PKSG-2b | c.1117A>G | p.Ile373Val | missense variant | moderate | contig700 | 1950521 | T/C | |
PKSG-2b | c.774G>A | p.Met258Ile | missense variant | moderate | contig700 | 1950864 | C/T | |
PKSG-2b | c.31A>T | p.Thr11Ser | missense variant | moderate | contig700 | 1951851 | T/A | |
PKSG-4b | c.496A>G | p.Lys166Glu | missense variant | moderate | contig700 | 2721177 | T/C | |
PKSG-4b | c.489delT | p.Phe163fs | frameshift variant | high | contig700 | 2721183 | CA/C | |
PKSG-4b | c.485A>G | p.Lys162Arg | missense variant | moderate | contig700 | 2721188 | T/C | |
PKSG-4b | c.431T>G | p.Val144Gly | missense variant | moderate | contig700 | 2721242 | A/C | |
PKSG-4b | c.419A>G | p.Asp140Gly | missense variant | moderate | contig700 | 2721254 | T/C | |
PKSG-4b |
c.352_355del |
p.Thr118fs | frameshift variant | high | contig700 | 2721317 | CCTGT/C |
|
PKSG-4b | c.324A>C | p.Glu108Asp | missense variant | moderate | contig700 | 2721349 | T/G |
|
PKSG-4b | c.323A>G | p.Glu108Gly | missense variant | moderate | contig700 | 2721350 | T/C |
|
aPT4 | c.97T>C | p.Tyr33His | missense variant | moderate | contig121 | 2828753 | T/C |
|
aPT4 | c.153A>C | p.Lys51Asn | missense variant | moderate | contig121 | 2828809 | A/C |
|
aPT4 |
c.235_236del |
p.Val79fs | frameshift variant | high | contig121 | 2829030 | ATG/A |
|
aPT4 | c.238delT | p.Ser80fs | frameshift variant | high | contig121 | 2829034 | AT/A |
|
aPT4 | c.302A>G | p.Asn101Ser | missense variant | moderate | contig121 | 2829099 | A/G |
|
aPT4 |
c.744+1_744+ |
splice donor variant & splice region variant & intron variant | high | contig121 | 2831022 |
GGTAATTTATTT |
|
Nearest genetic relatives (All Samples)
- 0.078 Cherry Blossom (RSP11325)
- 0.124 Cherry Blossom (RSP11306)
- 0.145 Cherry Blossom (RSP11329)
- 0.163 Cherry Blossom (RSP11299)
- 0.164 Cherry Blossom (RSP11327)
- 0.174 Unknown- Cherry Wine - 005 (RSP11272)
- 0.178 Cherry Blossom (RSP11316)
- 0.184 Unknown- Cherry Wine - 004 (RSP11271)
- 0.210 Cherry Blossom CBG (RSP11303)
- 0.220 Cherry Blossom (RSP11320)
- 0.221 Cherry Blossom (RSP11322)
- 0.225 Cherry Blossom (RSP11331)
- 0.225 Serious Happiness (RSP10763)
- 0.225 Cherry Blossom (RSP11319)
- 0.229 Cherry Wine (RSP11307)
- 0.230 Cherry Wine (RSP11305)
- 0.231 Midnight (RSP10941)
- 0.233 Cherry Blossom (RSP11304)
- 0.235 FL30 (RSP11361)
- 0.235 Doug s Varin (RSP11243)
Nearest genetic relatives (Base Tree)
- 0.264 UP Sunrise (RSP10989)
- 0.269 Cbot-2019-004 (RSP11132)
- 0.280 Cbot-2019-001 (RSP11129)
- 0.298 Blueberry Cheesecake (RSP10684)
- 0.307 Durban Poison (RSP11014)
- 0.310 Liberty Haze (RSP11000)
- 0.326 RKM-2018-006 (RSP11097)
- 0.328 Cherry (RSP11143)
- 0.340 QUEEN JESUS (RSP10105)
- 0.348 Blue Dream (RSP11033)
- 0.349 Kimbo Slice (RSP10997)
- 0.349 Tygra (RSP10667)
- 0.350 Italian Kiss (RSP11034)
- 0.351 Recon (RSP10755)
- 0.354 Hermaphrodite Research Sample1 (RSP11049)
- 0.357 RKM-2018-009 (RSP11100)
- 0.358 Sour Raspberry (RSP10551)
- 0.360 CST (RSP11002)
- 0.361 RKM-2018-003 (RSP11094)
- 0.363 Blueberry Cheesecake (RSP10680)
Most genetically distant strains (All Samples)
- 0.481 80E (RSP11211)
- 0.480 80E (RSP11213)
- 0.477 Red Eye OG (RSP11190)
- 0.468 Star Dawg (RSP11352)
- 0.467 Garlic (RSP11341)
- 0.460 Rugburn OG (RSP11353)
- 0.459 Skywalker OG (RSP10837)
- 0.459 RKM-2018-026 (RSP11118)
- 0.457 Abacus (RSP11266)
- 0.456 White Label 1 (RSP11336)
- 0.452 JL 3rd Gen Father (RSP11196)
- 0.451 RKM-2018-002 (RSP11093)
- 0.445 Feral (RSP11205)
- 0.444 SFVxTK (RSP11072)
- 0.442 RKM-2018-012 (RSP11103)
- 0.442 JL 4th Gen 2 (RSP11194)
- 0.442 RKM-2018-013 (RSP11104)
- 0.440 501st OG (RSP11241)
- 0.439 Gorilla Cookies (RSP11231)
- 0.438 USO31 (RSP10233)
Most genetically distant strains (Base Tree)
- 0.470 Skywalker OG (RSP10837)
- 0.462 RKM-2018-026 (RSP11118)
- 0.450 RKM-2018-002 (RSP11093)
- 0.442 RKM-2018-022 (RSP11114)
- 0.423 RKM-2018-034 (RSP11126)
- 0.417 RKM-2018-019 (RSP11111)
- 0.417 Feral (RSP10890)
- 0.414 USO 31 (RSP10981)
- 0.414 Cbot-2019-006 (RSP11134)
- 0.414 Skunk 18 (RSP11038)
- 0.414 Monoica (RSP10241)
- 0.412 Santhica27 (RSP11047)
- 0.411 Kush Hemp E1 (RSP11128)
- 0.411 Jiangji (RSP10653)
- 0.410 Pie Hoe (RSP11073)
- 0.410 Tisza (RSP11044)
- 0.409 Cbot-2019-005 (RSP11133)
- 0.407 JL yellow (RSP11075)
- 0.407 Carmagnola (RSP10979)
- 0.405 Black Beauty (RSP11035)
Nearest genetic relative in Phylos dataset
- Overlapping SNPs:
- 64
- Concordance:
- 36
Nearest genetic relative in Lynch dataset
- Overlapping SNPs:
- 4
- Concordance:
- 4
Blockchain Registration Information
- Transaction ID
-
ca0d7f12a1267e39
8972c490d5ef8b44 0eca1f9a85504331 afe97853509b5d78 - Stamping Certificate
- Download PDF (852.2 KB)
- SHASUM Hash
-
14ffccb73d521d3d
6fdd66d9c32c594b 9d1f1036d5adb99f b5d41b7ddbbd221d