Cherry Blossom
RSP 11317
Grower: Yabba Cannaba
General Information
- Sample Name
- CI2
- Accession Date
- October 16, 2019
- Reported Plant Sex
- Female
- Report Type
- StrainSEEK v2 3.2Mb
The strain rarity visualization shows how distant the strain is from the other cultivars in the Kannapedia database. The y-axis represents genetic distance, getting farther as you go up. The width of the visualization at any position along the y-axis shows how many strains there are in the database at that genetic distance. So, a common strain will have a more bottom-heavy shape, while uncommon and rare cultivars will have a visualization that is generally shifted towards the top.
Chemical Information
Cannabinoid and terpenoid information provided by the grower.
Cannabinoids
No information provided.
Terpenoids
No information provided.
Genetic Information
- Plant Type
- Type III
File Downloads
The bell curve in the heterozygosity visualization shows the distribution of heterozygosity levels for cannabis cultivars in the Kannapedia database. The green line shows where this particular strain fits within the distribution. Heterozygosity is associated with heterosis (aka hybrid vigor) but also leads to the production of more variable offspring. When plants have two genetically different parents, heterozygosity levels will be higher than if it has been inbred or backcrossed repeatedly.
The ratio of reads mapped to Y-contigs to reads mapped to the whole Cannabis genome (Y-ratios) has been demonstrated to be strongly correlated with plant sex typing. This plot shows the distribution of Y-ratios for all samples in our database which were sequenced with the same method (panel or WGS) as this sample and where this sample falls in the distribution.

This chart represents the Illumina sequence coverage over the Bt/Bd allele. These are the three regions in the cannabis genome that impact THCA, CBDA, CBGA production. Coverage over the Active CBDAS gene is highly correlated with Type II and Type III plants as described by Etienne de Meijer. Coverage over the THCA gene is highly correlated with Type I and Type II plants but is anti-correlated with Type III plants. Type I plants require coverage over the inactive CBDA loci and no coverage over the Active CBDA gene. Lack of coverage over the Active CBDA and Active THCA allele are presumed to be Type IV plants (CBGA dominant). While deletions of entire THCAS and CBDAS genes are the most common Bt:Bd alleles observed, it is possible to have plants with these genes where functional expression of the enzyme is disrupted by deactivating point mutations (Kojoma et al. 2006).



This chart represents the Illumina sequence coverage over the CBCA synthase gene.

Variants (THCAS, CBDAS, and CBCAS)
Variants (Select Genes of Interest)
PKSG-2a | c.67T>A | p.Phe23Ile | missense variant | moderate | contig700 | 1945567 | A/T | |
PKSG-2a | c.31A>T | p.Thr11Ser | missense variant | moderate | contig700 | 1945603 | T/A | |
PKSG-2b | c.1117A>G | p.Ile373Val | missense variant | moderate | contig700 | 1950521 | T/C | |
PKSG-2b | c.31A>T | p.Thr11Ser | missense variant | moderate | contig700 | 1951851 | T/A | |
PKSG-4b | c.496A>G | p.Lys166Glu | missense variant | moderate | contig700 | 2721177 | T/C | |
PKSG-4b | c.489delT | p.Phe163fs | frameshift variant | high | contig700 | 2721183 | CA/C | |
PKSG-4b | c.485A>G | p.Lys162Arg | missense variant | moderate | contig700 | 2721188 | T/C | |
PKSG-4b | c.431T>G | p.Val144Gly | missense variant | moderate | contig700 | 2721242 | A/C | |
PKSG-4b | c.419A>G | p.Asp140Gly | missense variant | moderate | contig700 | 2721254 | T/C | |
PKSG-4b |
c.352_355del |
p.Thr118fs | frameshift variant | high | contig700 | 2721317 | CCTGT/C |
|
aPT4 | c.302A>G | p.Asn101Ser | missense variant | moderate | contig121 | 2829099 | A/G |
|
aPT4 |
c.744+1_744+ |
splice donor variant & splice region variant & intron variant | high | contig121 | 2831022 |
GGTAATTTATTT |
|
|
HDS-2 |
c.82_93delGT |
p.Val28_Thr3 |
conservative inframe deletion | moderate | contig95 | 1989748 |
CGTAACCGGAAC |
|
HDS-2 | c.127T>G | p.Ser43Ala | missense variant | moderate | contig95 | 1989794 | T/G |
|
Nearest genetic relatives (All Samples)
- 0.171 Unknown- Cherry Wine - 005 (RSP11272)
- 0.183 Cherry Blossom (RSP11324)
- 0.183 Cherry Blossom (RSP11330)
- 0.204 Cherry Blossom (RSP11333)
- 0.211 Cherry Blossom (RSP11326)
- 0.220 Cherry Blossom (RSP11314)
- 0.220 Cherry Blossom (RSP11313)
- 0.224 Cherry Blossom (RSP11335)
- 0.228 Cherry Blossom (RSP11308)
- 0.229 Cherry Blossom (RSP11332)
- 0.232 Cherry Blossom (RSP11304)
- 0.235 Unknown- Cherry Wine - 004 (RSP11271)
- 0.245 Cherry Blossom (RSP11322)
- 0.248 Cherry Blossom CBG (RSP11303)
- 0.251 Cherry Blossom (RSP11306)
- 0.251 Cherry Blossom (RSP11320)
- 0.263 Cherry Blossom (RSP11309)
- 0.268 Cherry Wine (RSP11145)
- 0.275 Cherry (RSP11142)
- 0.276 Cherry Blossom (RSP11327)
Nearest genetic relatives (Base Tree)
- 0.288 Cherry (RSP11142)
- 0.310 Recon (RSP10755)
- 0.330 Liberty Haze (RSP11000)
- 0.341 KYRG-11 (RSP11051)
- 0.342 UP Sunrise (RSP10989)
- 0.344 Tisza (RSP10659)
- 0.350 Kyrgyz Gold (RSP11054)
- 0.353 Blueberry Cheesecake (RSP10684)
- 0.356 Tygra (RSP10667)
- 0.359 Kimbo Slice (RSP10997)
- 0.360 Monoica (RSP10241)
- 0.362 Carmagnola (RSP11037)
- 0.363 USO 31 (RSP10981)
- 0.364 Lovrin (RSP10658)
- 0.370 Futura 75 (RSP10664)
- 0.371 RKM-2018-031 (RSP11123)
- 0.373 Cbot-2019-001 (RSP11129)
- 0.373 Durban Poison (RSP11014)
- 0.374 Santhica27 (RSP11047)
- 0.377 Tisza (RSP11044)
Most genetically distant strains (All Samples)
- 0.527 Danny Noonan (RSP11070)
- 0.499 TI (RSP11149)
- 0.496 Chem 91 (RSP11185)
- 0.494 RKM-2018-002 (RSP11093)
- 0.491 RKM-2018-028 (RSP11120)
- 0.484 JL yellow (RSP11075)
- 0.482 Skunk 18 (RSP11038)
- 0.478 JL 3rd Gen Mother (RSP11214)
- 0.477 T S A G E (RSP11351)
- 0.476 Skunk 18 (RSP11030)
- 0.474 JL 3rd Gen Mother (RSP11197)
- 0.474 Cherry Blossom (RSP11323)
- 0.471 RKM-2018-018 (RSP11110)
- 0.470 JL 4th Gen 2 (RSP11194)
- 0.469 JL 4th Gen 5 (RSP11199)
- 0.465 RKM-2018-023 (RSP11115)
- 0.461 Black Beauty (RSP11035)
- 0.460 RKM-2018-030 (RSP11122)
- 0.460 Sour Raspberry (RSP10551)
- 0.458 JL 4th Gen 1 (RSP11193)
Most genetically distant strains (Base Tree)
- 0.495 RKM-2018-028 (RSP11120)
- 0.490 JL yellow (RSP11075)
- 0.487 Skunk 18 (RSP11038)
- 0.481 RKM-2018-002 (RSP11093)
- 0.472 RKM-2018-018 (RSP11110)
- 0.465 RKM-2018-023 (RSP11115)
- 0.463 Sour Raspberry (RSP10551)
- 0.460 Black Beauty (RSP11035)
- 0.454 Cbot-2019-004 (RSP11132)
- 0.448 Hermaphrodite Research Sample1 (RSP11049)
- 0.447 RKM-2018-005 (RSP11096)
- 0.447 CST (RSP11002)
- 0.445 RKM-2018-009 (RSP11100)
- 0.444 Kush Hemp E1 (RSP11128)
- 0.444 RKM-2018-006 (RSP11097)
- 0.442 RKM-2018-032 (RSP11124)
- 0.439 Golden Goat 2 (RSP10991)
- 0.439 Cbot-2019-005 (RSP11133)
- 0.437 Blue Dream (RSP11033)
- 0.430 RKM-2018-033 (RSP11125)
Nearest genetic relative in Phylos dataset
- Overlapping SNPs:
- 64
- Concordance:
- 35
Nearest genetic relative in Lynch dataset
- Overlapping SNPs:
- 3
- Concordance:
- 3
Blockchain Registration Information
- Transaction ID
-
805e46b54dde6886
4df80c9510e3daa9 f97f8911978df731 19a36b7c65c377b6 - Stamping Certificate
- Download PDF (855.3 KB)
- SHASUM Hash
-
75bf27fde3ef31c7
b346104c81a35435 6791edc2aa658720 b4fdf2bc3ea828cc