Cherry Blossom
RSP 11329
Grower: Yabba Cannaba
General Information
- Sample Name
- CG7
- Accession Date
- October 17, 2019
- Reported Plant Sex
- Female
- Report Type
- StrainSEEK v2 3.2Mb
The strain rarity visualization shows how distant the strain is from the other cultivars in the Kannapedia database. The y-axis represents genetic distance, getting farther as you go up. The width of the visualization at any position along the y-axis shows how many strains there are in the database at that genetic distance. So, a common strain will have a more bottom-heavy shape, while uncommon and rare cultivars will have a visualization that is generally shifted towards the top.
Chemical Information
Cannabinoid and terpenoid information provided by the grower.
Cannabinoids
No information provided.
Terpenoids
No information provided.
Genetic Information
- Plant Type
- Type III
File Downloads
The bell curve in the heterozygosity visualization shows the distribution of heterozygosity levels for cannabis cultivars in the Kannapedia database. The green line shows where this particular strain fits within the distribution. Heterozygosity is associated with heterosis (aka hybrid vigor) but also leads to the production of more variable offspring. When plants have two genetically different parents, heterozygosity levels will be higher than if it has been inbred or backcrossed repeatedly.
The ratio of reads mapped to Y-contigs to reads mapped to the whole Cannabis genome (Y-ratios) has been demonstrated to be strongly correlated with plant sex typing. This plot shows the distribution of Y-ratios for all samples in our database which were sequenced with the same method (panel or WGS) as this sample and where this sample falls in the distribution.

This chart represents the Illumina sequence coverage over the Bt/Bd allele. These are the three regions in the cannabis genome that impact THCA, CBDA, CBGA production. Coverage over the Active CBDAS gene is highly correlated with Type II and Type III plants as described by Etienne de Meijer. Coverage over the THCA gene is highly correlated with Type I and Type II plants but is anti-correlated with Type III plants. Type I plants require coverage over the inactive CBDA loci and no coverage over the Active CBDA gene. Lack of coverage over the Active CBDA and Active THCA allele are presumed to be Type IV plants (CBGA dominant). While deletions of entire THCAS and CBDAS genes are the most common Bt:Bd alleles observed, it is possible to have plants with these genes where functional expression of the enzyme is disrupted by deactivating point mutations (Kojoma et al. 2006).



This chart represents the Illumina sequence coverage over the CBCA synthase gene.

Variants (THCAS, CBDAS, and CBCAS)
No variants to report
Variants (Select Genes of Interest)
GPPs1 |
c.845_848del |
p.Glu282fs | frameshift variant | high | contig676 | 169629 | TGAAA/T |
|
PKSG-4a | c.493G>A | p.Gly165Ser | missense variant | moderate | contig700 | 1937904 | G/A |
|
PKSG-4a |
c.1191_1193d |
p.Tyr398del | disruptive inframe deletion | moderate | contig700 | 1938600 | AATT/A |
|
PKSG-2a | c.1117A>G | p.Ile373Val | missense variant | moderate | contig700 | 1944273 | T/C | |
PKSG-2b | c.1117A>G | p.Ile373Val | missense variant | moderate | contig700 | 1950521 | T/C | |
PKSG-4b | c.496A>G | p.Lys166Glu | missense variant | moderate | contig700 | 2721177 | T/C | |
PKSG-4b | c.489delT | p.Phe163fs | frameshift variant | high | contig700 | 2721183 | CA/C | |
PKSG-4b | c.485A>G | p.Lys162Arg | missense variant | moderate | contig700 | 2721188 | T/C | |
PKSG-4b |
c.352_355del |
p.Thr118fs | frameshift variant | high | contig700 | 2721317 | CCTGT/C |
|
PKSG-4b | c.324A>C | p.Glu108Asp | missense variant | moderate | contig700 | 2721349 | T/G |
|
PKSG-4b | c.323A>G | p.Glu108Gly | missense variant | moderate | contig700 | 2721350 | T/C |
|
DXR-2 | c.1319T>C | p.Ile440Thr | missense variant | moderate | contig380 | 285250 | A/G |
|
aPT4 | c.97T>C | p.Tyr33His | missense variant | moderate | contig121 | 2828753 | T/C |
|
aPT4 | c.153A>C | p.Lys51Asn | missense variant | moderate | contig121 | 2828809 | A/C |
|
aPT4 |
c.235_236del |
p.Val79fs | frameshift variant | high | contig121 | 2829030 | ATG/A |
|
aPT4 | c.238delT | p.Ser80fs | frameshift variant | high | contig121 | 2829034 | AT/A |
|
aPT4 | c.302A>G | p.Asn101Ser | missense variant | moderate | contig121 | 2829099 | A/G |
|
aPT4 |
c.744+1_744+ |
splice donor variant & splice region variant & intron variant | high | contig121 | 2831022 |
GGTAATTTATTT |
|
Nearest genetic relatives (All Samples)
- 0.142 Cherry Blossom (RSP11306)
- 0.145 Cherry Blossom (RSP11315)
- 0.165 Cherry Blossom (RSP11304)
- 0.174 Cherry Blossom (RSP11326)
- 0.194 Cherry Blossom (RSP11322)
- 0.199 Cherry Blossom (RSP11299)
- 0.204 Cherry Blossom CBG (RSP11303)
- 0.212 Cherry Blossom (RSP11313)
- 0.212 Cherry Blossom (RSP11331)
- 0.212 Cherry Blossom (RSP11325)
- 0.228 Cherry Wine (RSP11305)
- 0.228 Cherry Wine (RSP11307)
- 0.231 Cherry Blossom (RSP11316)
- 0.233 Cherry Blossom (RSP11320)
- 0.242 Queen Dream CBG (RSP11286)
- 0.244 Cherry Blossom (RSP11327)
- 0.245 Blueberry Cheesecake (RSP10684)
- 0.250 Cherry Blossom (RSP11324)
- 0.251 Domnesia (RSP11184)
- 0.251 Unknown- Cherry Wine - 005 (RSP11272)
Nearest genetic relatives (Base Tree)
- 0.265 Blueberry Cheesecake (RSP10684)
- 0.308 Cbot-2019-004 (RSP11132)
- 0.310 Durban Poison (RSP11014)
- 0.330 Liberty Haze (RSP11000)
- 0.334 Gold Cracker (RSP11048)
- 0.336 Recon (RSP10755)
- 0.344 Cherry (RSP11143)
- 0.346 Kimbo Slice (RSP10997)
- 0.347 Tygra (RSP10667)
- 0.347 Golden Goat 2 (RSP10991)
- 0.350 Cherry (RSP11142)
- 0.361 UP Sunrise (RSP10989)
- 0.362 Kush Hemp E1 (RSP11128)
- 0.363 CST (RSP11002)
- 0.363 Hermaphrodite ResearchSample2 (RSP11050)
- 0.368 QUEEN JESUS (RSP10105)
- 0.371 Cbot-2019-001 (RSP11129)
- 0.372 The Gift (RSP10988)
- 0.379 RKM-2018-031 (RSP11123)
- 0.379 RKM-2018-029 (RSP11121)
Most genetically distant strains (All Samples)
- 0.485 Chem 91 (RSP11185)
- 0.457 JL yellow (RSP11075)
- 0.455 Cherry Blossom (RSP11328)
- 0.452 JL 3rd Gen Mother (RSP11197)
- 0.450 Cherry Blossom (RSP11318)
- 0.449 JL 3rd Gen Father (RSP11196)
- 0.447 RKM-2018-024 (RSP11116)
- 0.446 White Label 1 (RSP11336)
- 0.445 RKM-2018-012 (RSP11103)
- 0.442 UP The Straits (RSP11260)
- 0.442 Gorilla Cookies (RSP11231)
- 0.442 JL 3rd Gen Mother (RSP11214)
- 0.441 JL 4th Gen 3 (RSP11195)
- 0.441 Rugburn OG (RSP11353)
- 0.439 RKM-2018-026 (RSP11118)
- 0.439 JL 4th Gen 2 (RSP11194)
- 0.438 Star Dawg (RSP11352)
- 0.435 RKM-2018-002 (RSP11093)
- 0.434 Skunk 18 (RSP11038)
- 0.432 80E (RSP11213)
Most genetically distant strains (Base Tree)
- 0.453 JL yellow (RSP11075)
- 0.438 RKM-2018-026 (RSP11118)
- 0.430 RKM-2018-028 (RSP11120)
- 0.429 Skunk 18 (RSP11038)
- 0.428 RKM-2018-002 (RSP11093)
- 0.423 Skywalker OG (RSP10837)
- 0.422 USO 31 (RSP10981)
- 0.421 RKM-2018-023 (RSP11115)
- 0.419 RKM-2018-033 (RSP11125)
- 0.414 Sour Raspberry (RSP10551)
- 0.414 Santhica27 (RSP11047)
- 0.414 RKM-2018-018 (RSP11110)
- 0.413 RKM-2018-003 (RSP11094)
- 0.410 Monoica (RSP10241)
- 0.410 RKM-2018-020 (RSP11112)
- 0.409 Carmagnola (RSP11037)
- 0.409 Lovrin (RSP10658)
- 0.407 Feral (RSP10890)
- 0.404 Hermaphrodite Research Sample1 (RSP11049)
- 0.404 Blueberry Cheesecake (RSP10672)
Nearest genetic relative in Phylos dataset
- Overlapping SNPs:
- 63
- Concordance:
- 38
Nearest genetic relative in Lynch dataset
- Overlapping SNPs:
- 4
- Concordance:
- 4
Blockchain Registration Information
- Transaction ID
-
eca972e82e35e99b
310333a38df27053 ecbf99a92af84d02 2ab2271e9780cc63 - Stamping Certificate
- Download PDF (870.0 KB)
- SHASUM Hash
-
a14c16f0eb399238
33a6b2b4bfa75ac4 d30de367ca959bdf 8a26c233f96fdf75