Cherry Blossom
RSP 11332
Grower: Yabba Cannaba
General Information
- Sample Name
- CI4
- Accession Date
- October 17, 2019
- Reported Plant Sex
- Female
- Report Type
- StrainSEEK v2 3.2Mb
The strain rarity visualization shows how distant the strain is from the other cultivars in the Kannapedia database. The y-axis represents genetic distance, getting farther as you go up. The width of the visualization at any position along the y-axis shows how many strains there are in the database at that genetic distance. So, a common strain will have a more bottom-heavy shape, while uncommon and rare cultivars will have a visualization that is generally shifted towards the top.
Chemical Information
Cannabinoid and terpenoid information provided by the grower.
Cannabinoids
No information provided.
Terpenoids
No information provided.
Genetic Information
- Plant Type
- Type III
File Downloads
The bell curve in the heterozygosity visualization shows the distribution of heterozygosity levels for cannabis cultivars in the Kannapedia database. The green line shows where this particular strain fits within the distribution. Heterozygosity is associated with heterosis (aka hybrid vigor) but also leads to the production of more variable offspring. When plants have two genetically different parents, heterozygosity levels will be higher than if it has been inbred or backcrossed repeatedly.
The ratio of reads mapped to Y-contigs to reads mapped to the whole Cannabis genome (Y-ratios) has been demonstrated to be strongly correlated with plant sex typing. This plot shows the distribution of Y-ratios for all samples in our database which were sequenced with the same method (panel or WGS) as this sample and where this sample falls in the distribution.

This chart represents the Illumina sequence coverage over the Bt/Bd allele. These are the three regions in the cannabis genome that impact THCA, CBDA, CBGA production. Coverage over the Active CBDAS gene is highly correlated with Type II and Type III plants as described by Etienne de Meijer. Coverage over the THCA gene is highly correlated with Type I and Type II plants but is anti-correlated with Type III plants. Type I plants require coverage over the inactive CBDA loci and no coverage over the Active CBDA gene. Lack of coverage over the Active CBDA and Active THCA allele are presumed to be Type IV plants (CBGA dominant). While deletions of entire THCAS and CBDAS genes are the most common Bt:Bd alleles observed, it is possible to have plants with these genes where functional expression of the enzyme is disrupted by deactivating point mutations (Kojoma et al. 2006).



This chart represents the Illumina sequence coverage over the CBCA synthase gene.

Variants (THCAS, CBDAS, and CBCAS)
Variants (Select Genes of Interest)
GPPs1 |
c.845_848del |
p.Glu282fs | frameshift variant | high | contig676 | 169629 | TGAAA/T |
|
PKSG-2a | c.67T>A | p.Phe23Ile | missense variant | moderate | contig700 | 1945567 | A/T | |
PKSG-2a | c.31A>T | p.Thr11Ser | missense variant | moderate | contig700 | 1945603 | T/A | |
PKSG-2b | c.1132C>G | p.Leu378Val | missense variant | moderate | contig700 | 1950506 | G/C |
|
PKSG-2b | c.1117A>G | p.Ile373Val | missense variant | moderate | contig700 | 1950521 | T/C | |
PKSG-2b | c.31A>T | p.Thr11Ser | missense variant | moderate | contig700 | 1951851 | T/A | |
PKSG-4b | c.496A>G | p.Lys166Glu | missense variant | moderate | contig700 | 2721177 | T/C | |
PKSG-4b | c.489delT | p.Phe163fs | frameshift variant | high | contig700 | 2721183 | CA/C | |
PKSG-4b | c.485A>G | p.Lys162Arg | missense variant | moderate | contig700 | 2721188 | T/C | |
PKSG-4b | c.431T>G | p.Val144Gly | missense variant | moderate | contig700 | 2721242 | A/C | |
PKSG-4b | c.419A>G | p.Asp140Gly | missense variant | moderate | contig700 | 2721254 | T/C | |
PKSG-4b |
c.352_355del |
p.Thr118fs | frameshift variant | high | contig700 | 2721317 | CCTGT/C |
|
PKSG-4b | c.323A>G | p.Glu108Gly | missense variant | moderate | contig700 | 2721350 | T/C |
|
DXR-2 | c.1319T>C | p.Ile440Thr | missense variant | moderate | contig380 | 285250 | A/G |
|
HDS-2 |
c.82_93delGT |
p.Val28_Thr3 |
conservative inframe deletion | moderate | contig95 | 1989748 |
CGTAACCGGAAC |
|
HDS-2 | c.127T>G | p.Ser43Ala | missense variant | moderate | contig95 | 1989794 | T/G |
|
Nearest genetic relatives (All Samples)
- 0.076 Unknown- Cherry Wine - 005 (RSP11272)
- 0.126 Cherry Blossom (RSP11320)
- 0.145 Cherry Blossom (RSP11304)
- 0.149 Cherry Blossom (RSP11300)
- 0.158 Cherry Blossom (RSP11310)
- 0.174 Cherry Blossom (RSP11328)
- 0.185 Cherry Blossom (RSP11309)
- 0.185 Cherry Blossom (RSP11325)
- 0.186 Cherry Blossom (RSP11313)
- 0.191 Cherry Blossom (RSP11308)
- 0.192 Cherry Blossom (RSP11335)
- 0.194 Cherry Blossom (RSP11330)
- 0.194 Unknown- Cherry Wine - 003 (RSP11270)
- 0.201 Cherry Blossom (RSP11299)
- 0.202 Midnight (RSP10941)
- 0.203 Cherry Wine (RSP11307)
- 0.204 Cherry Wine (RSP11305)
- 0.205 Cherry Wine (RSP11145)
- 0.208 FL30 (RSP11361)
- 0.211 Cherry Blossom (RSP11322)
Nearest genetic relatives (Base Tree)
- 0.255 UP Sunrise (RSP10989)
- 0.265 Blueberry Cheesecake (RSP10684)
- 0.267 Liberty Haze (RSP11000)
- 0.294 Cbot-2019-001 (RSP11129)
- 0.295 Durban Poison (RSP11014)
- 0.300 Cherry (RSP11142)
- 0.308 Cherry (RSP11143)
- 0.337 RKM-2018-031 (RSP11123)
- 0.341 Recon (RSP10755)
- 0.347 Kimbo Slice (RSP10997)
- 0.349 QUEEN JESUS (RSP10105)
- 0.356 RKM-2018-003 (RSP11094)
- 0.359 Blueberry Cheesecake (RSP10672)
- 0.360 RKM-2018-020 (RSP11112)
- 0.360 Gold Cracker (RSP11048)
- 0.363 CST (RSP11002)
- 0.367 RKM-2018-027 (RSP11119)
- 0.369 RKM-2018-029 (RSP11121)
- 0.369 The Gift (RSP10988)
- 0.380 Cbot-2019-004 (RSP11132)
Most genetically distant strains (All Samples)
- 0.461 JL 4th Gen 2 (RSP11194)
- 0.459 JL yellow (RSP11075)
- 0.455 Abacus (RSP11266)
- 0.450 JL 4th Gen 5 (RSP11199)
- 0.448 RKM-2018-002 (RSP11093)
- 0.448 JL 3rd Gen Mother (RSP11214)
- 0.445 Kush Hemp E1 (RSP11128)
- 0.442 Arcata Trainwreck (RSP11176)
- 0.442 Feral (RSP11205)
- 0.441 Star Dawg (RSP11352)
- 0.436 JL 3rd Gen Father (RSP11196)
- 0.434 Feral (RSP10890)
- 0.431 Chem 91 (RSP11185)
- 0.430 Carmaleonte (RSP11207)
- 0.430 Garlic (RSP11341)
- 0.430 USO 31 (RSP10983)
- 0.430 RKM-2018-018 (RSP11110)
- 0.430 Feral (RSP10892)
- 0.430 USO31 (RSP10233)
- 0.428 Danny Noonan (RSP11070)
Most genetically distant strains (Base Tree)
- 0.469 JL yellow (RSP11075)
- 0.455 RKM-2018-002 (RSP11093)
- 0.453 Kush Hemp E1 (RSP11128)
- 0.446 RKM-2018-018 (RSP11110)
- 0.443 Feral (RSP10890)
- 0.437 RKM-2018-022 (RSP11114)
- 0.435 Skunk 18 (RSP11038)
- 0.432 Hermaphrodite Research Sample1 (RSP11049)
- 0.432 RKM-2018-026 (RSP11118)
- 0.428 Sour Raspberry (RSP10551)
- 0.426 RKM-2018-034 (RSP11126)
- 0.426 Carmagnola (RSP11037)
- 0.424 Ivory (RSP10668)
- 0.422 Pie Hoe (RSP11073)
- 0.420 Carmagnola (RSP10979)
- 0.419 Monoica (RSP10241)
- 0.416 Black Beauty (RSP11035)
- 0.415 Fedora 17 (RSP10661)
- 0.412 USO 31 (RSP10981)
- 0.412 Skywalker OG (RSP10837)
Nearest genetic relative in Phylos dataset
- Overlapping SNPs:
- 63
- Concordance:
- 42
Nearest genetic relative in Lynch dataset
- Overlapping SNPs:
- 4
- Concordance:
- 4
Blockchain Registration Information
- Transaction ID
-
609ae69214ba6522
447020eff3b65eac 5976bd63d00f00bf 0501aef85c61aa06 - Stamping Certificate
- Download PDF (854.7 KB)
- SHASUM Hash
-
b1498826b73874e1
c381577887a64d06 0f9249109f148411 629023b42431130f