101st AIRBORN CBD

RSP 11350

Grower: Happy Valley

Summary

101st AIRBORN CBD (RSP11350/Happy Valley) is a genetic Type II plant and its genetics appear uncommon. The sample's closest relative in the database is Cbot-2019-003 (RSP11131/Research Development Cannabinoid) and it is a potential sibling. The heterozygosity rate is 1.12% which is average (55.6 percentile).

General Information

Accession Date
October 22, 2019
Reported Plant Sex
Female

The strain rarity visualization shows how distant the strain is from the other cultivars in the Kannapedia database. The y-axis represents genetic distance, getting farther as you go up. The width of the visualization at any position along the y-axis shows how many strains there are in the database at that genetic distance. So, a common strain will have a more bottom-heavy shape, while uncommon and rare cultivars will have a visualization that is generally shifted towards the top.

Rarity: Uncommon
Most Distant Most Similar

Chemical Information

Cannabinoid and terpenoid information provided by the grower.

Cannabinoids

No information provided.

Terpenoids

No information provided.

Genetic Information

Plant Type
Type II

The bell curve in the heterozygosity visualization shows the distribution of heterozygosity levels for cannabis cultivars in the Kannapedia database. The green line shows where this particular strain fits within the distribution. Heterozygosity is associated with heterosis (aka hybrid vigor) but also leads to the production of more variable offspring. When plants have two genetically different parents, heterozygosity levels will be higher than if it has been inbred or backcrossed repeatedly.

Heterozygosity: 1.12%
Least Heterozygous Most Heterozygous

The ratio of reads mapped to Y-contigs to reads mapped to the whole Cannabis genome (Y-ratios) has been demonstrated to be strongly correlated with plant sex typing. This plot shows the distribution of Y-ratios for all samples in our database which were sequenced with the same method (panel or WGS) as this sample and where this sample falls in the distribution.

Y-Ratio Distribution: 0.0441
male female RSP11350

This chart represents the Illumina sequence coverage over the Bt/Bd allele. These are the three regions in the cannabis genome that impact THCA, CBDA, CBGA production. Coverage over the Active CBDAS gene is highly correlated with Type II and Type III plants as described by Etienne de Meijer. Coverage over the THCA gene is highly correlated with Type I and Type II plants but is anti-correlated with Type III plants. Type I plants require coverage over the inactive CBDA loci and no coverage over the Active CBDA gene. Lack of coverage over the Active CBDA and Active THCA allele are presumed to be Type IV plants (CBGA dominant). While deletions of entire THCAS and CBDAS genes are the most common Bt:Bd alleles observed, it is possible to have plants with these genes where functional expression of the enzyme is disrupted by deactivating point mutations (Kojoma et al. 2006).

Bt/Bd Allele Coverage

This chart represents the Illumina sequence coverage over the CBCA synthase gene.

CBCAS Coverage

Variants (THCAS, CBDAS, and CBCAS)

No variants to report

Variants (Select Genes of Interest)

PKSG-2a

UniProt

c.67T>A p.Phe23Ile missense variant moderate contig700 1945567

IGV: Start, Jump

A/T
NGS:
0.825
C90:
0.904
PKSG-2a

UniProt

c.31A>T p.Thr11Ser missense variant moderate contig700 1945603

IGV: Start, Jump

T/A
NGS:
0.763
C90:
0.876
PKSG-2b

UniProt

c.1152T>A p.Asn384Lys missense variant moderate contig700 1950486

IGV: Start, Jump

A/T
NGS:
0.715
C90:
0.895
PKSG-2b

UniProt

c.1132C>G p.Leu378Val missense variant moderate contig700 1950506

IGV: Start, Jump

G/C
NGS:
0.717
C90:
0.000
PKSG-2b

UniProt

c.1117A>G p.Ile373Val missense variant moderate contig700 1950521

IGV: Start, Jump

T/C
NGS:
0.807
C90:
0.981
PKSG-2b

UniProt

c.948T>G p.Asp316Glu missense variant moderate contig700 1950690

IGV: Start, Jump

A/C
NGS:
0.456
C90:
0.000
PKSG-2b

UniProt

c.945T>G p.Ser315Arg missense variant moderate contig700 1950693

IGV: Start, Jump

A/C
NGS:
0.454
C90:
0.000
PKSG-2b

UniProt

c.944G>A p.Ser315Asn missense variant moderate contig700 1950694

IGV: Start, Jump

C/T
NGS:
0.445
C90:
0.000
PKSG-2b

UniProt

c.934C>G p.His312Asp missense variant moderate contig700 1950704

IGV: Start, Jump

G/C
NGS:
0.410
C90:
0.000
PKSG-2b

UniProt

c.31A>T p.Thr11Ser missense variant moderate contig700 1951851

IGV: Start, Jump

T/A
NGS:
0.844
C90:
0.880
PKSG-2b

UniProt

c.-2_1delATA p.Met1del start lost & conservative inframe deletion high contig700 1951880

IGV: Start, Jump

ATAT/A
NGS:
0.009
C90:
0.000
PKSG-4b

UniProt

c.496A>G p.Lys166Glu missense variant moderate contig700 2721177

IGV: Start, Jump

T/C
NGS:
0.651
C90:
0.684
PKSG-4b

UniProt

c.492G>C p.Glu164Asp missense variant moderate contig700 2721181

IGV: Start, Jump

C/G
NGS:
0.048
C90:
0.000
PKSG-4b

UniProt

c.489delT p.Phe163fs frameshift variant high contig700 2721183

IGV: Start, Jump

CA/C
NGS:
0.792
C90:
0.761
PKSG-4b

UniProt

c.485A>G p.Lys162Arg missense variant moderate contig700 2721188

IGV: Start, Jump

T/C
NGS:
0.643
C90:
0.301
PKSG-4b

UniProt

c.431T>G p.Val144Gly missense variant moderate contig700 2721242

IGV: Start, Jump

A/C
NGS:
0.575
C90:
0.679
PKSG-4b

UniProt

c.419A>G p.Asp140Gly missense variant moderate contig700 2721254

IGV: Start, Jump

T/C
NGS:
0.430
C90:
0.440
PKSG-4b

UniProt

c.352_355delACAG p.Thr118fs frameshift variant high contig700 2721317

IGV: Start, Jump

CCTGT/C
NGS:
0.529
C90:
0.000
PKSG-4b

UniProt

c.323A>G p.Glu108Gly missense variant moderate contig700 2721350

IGV: Start, Jump

T/C
NGS:
0.469
C90:
0.000
DXR-2

UniProt

c.1319T>C p.Ile440Thr missense variant moderate contig380 285250

IGV: Start, Jump

A/G
NGS:
0.480
C90:
0.000
aPT4

UniProt

c.16G>A p.Val6Ile missense variant moderate contig121 2828672

IGV: Start, Jump

G/A
NGS:
0.158
C90:
0.000
aPT4

UniProt

c.97T>C p.Tyr33His missense variant moderate contig121 2828753

IGV: Start, Jump

T/C
NGS:
0.439
C90:
0.000
aPT4

UniProt

c.153A>C p.Lys51Asn missense variant moderate contig121 2828809

IGV: Start, Jump

A/C
NGS:
0.375
C90:
0.000
aPT4

UniProt

c.235_236delGT p.Val79fs frameshift variant high contig121 2829030

IGV: Start, Jump

ATG/A
NGS:
0.417
C90:
0.000
aPT4

UniProt

c.238delT p.Ser80fs frameshift variant high contig121 2829034

IGV: Start, Jump

AT/A
NGS:
0.421
C90:
0.000
aPT4

UniProt

c.302A>G p.Asn101Ser missense variant moderate contig121 2829099

IGV: Start, Jump

A/G
NGS:
0.349
C90:
0.000
aPT4

UniProt

c.1168T>C p.Tyr390His missense variant moderate contig121 2833503

IGV: Start, Jump

T/C
NGS:
0.546
C90:
0.000
aPT1

UniProt

c.629C>T p.Thr210Ile missense variant moderate contig121 2840237

IGV: Start, Jump

C/T
NGS:
0.561
C90:
0.598
HDS-2

UniProt

c.82_93delGTAACCGGAACT p.Val28_Thr31del conservative inframe deletion moderate contig95 1989748

IGV: Start, Jump

CGTAACCGGAACT/C
NGS:
0.805
C90:
0.000
HDS-2

UniProt

c.127T>G p.Ser43Ala missense variant moderate contig95 1989794

IGV: Start, Jump

T/G
NGS:
0.721
C90:
0.000
HDS-1

UniProt

c.-108+1_-108+2insG splice donor variant & intron variant high contig1891 889975

IGV: Start, Jump

A/AC
NGS:
0.217
C90:
0.000

Nearest genetic relatives (All Samples)

0 0.058 0.117 0.175 0.233
clone distance sibling distance more distant
  1. 0.119 Cbot-2019-003 (RSP11131)
  2. 0.148 Electra (RSP11366)
  3. 0.163 Lift (RSP11378)
  4. 0.172 Suver Haze (RSP11364)
  5. 0.185 Midnight 05MAY2017 (RSP10941)
  6. 0.188 Lifter (RSP11365)
  7. 0.189 Cbot-2019-001 (RSP11129)
  8. 0.192 CANNATONIC (RSP11349)
  9. 0.194 Blueberry Cheesecake (RSP10684)
  10. 0.195 Joy (RSP11380)
  11. 0.195 Doug s Varin (RSP11243)
  12. 0.197 Liberty Haze (RSP11000)
  13. 0.200 Domnesia (RSP11184)
  14. 0.206 Medxotic (RSP11410)
  15. 0.206 AVIDEKEL 2 0 (RSP11174)
  16. 0.207 FL30 7 11 2019 (RSP11361)
  17. 0.208 Unknown--Cherry Wine---005- (RSP11272)
  18. 0.212 Cherry Wine (RSP11307)
  19. 0.214 Cherry Wine (RSP11305)
  20. 0.218 Queen Dream CBG (RSP11297)

Nearest genetic relatives (Base Tree)

0 0.083 0.167 0.250 0.333
clone distance sibling distance more distant
  1. 0.201 Cbot-2019-001 (RSP11129)
  2. 0.215 Liberty Haze (RSP11000)
  3. 0.232 Blueberry Cheesecake (RSP10684)
  4. 0.245 UP Sunrise (RSP10989)
  5. 0.261 Cbot-2019-005 (RSP11133)
  6. 0.265 Durban Poison (RSP11014)
  7. 0.270 Cherry (RSP11143)
  8. 0.277 RKM-2018-031 (RSP11123)
  9. 0.279 Blueberry Cheesecake (RSP10672)
  10. 0.283 Recon (RSP10755)
  11. 0.287 Cbot-2019-004 (RSP11132)
  12. 0.295 Queen Jesus (RSP10105)
  13. 0.296 Hermaphrodite ResearchSample2 (RSP11050)
  14. 0.300 RKM-2018-029 (RSP11121)
  15. 0.304 RKM-2018-020 (RSP11112)
  16. 0.307 Golden Goat 2 (RSP10991)
  17. 0.308 Blueberry Cheesecake (RSP10680)
  18. 0.309 Kimbo Slice (RSP10997)
  19. 0.311 CST (RSP11002)
  20. 0.311 RKM-2018-004 (RSP11096)

Most genetically distant strains (All Samples)

0 0.108 0.217 0.325 0.433
clone distance sibling distance more distant
  1. 0.416 Cherry Blossom (RSP11323)
  2. 0.413 Ruderalis Indica (SRR14708267)
  3. 0.412 JL yellow (RSP11075)
  4. 0.405 JL 3rd Gen Mother (RSP11214)
  5. 0.402 80E (RSP11213)
  6. 0.397 Tanao Sri -46- (RSP11486)
  7. 0.393 Northern Lights (RSP11501)
  8. 0.390 Big Bud (SRR14708270)
  9. 0.387 R1in136 (SRR14708226)
  10. 0.387 80E (RSP11212)
  11. 0.387 JL 3rd Gen Mother (RSP11197)
  12. 0.386 JL 3rd Gen Father (RSP11196)
  13. 0.386 R3in134 (SRR14708220)
  14. 0.385 GMO x Garlic Breath (RSP12507)
  15. 0.385 80E (RSP11211)
  16. 0.384 White Label 1 (RSP11336)
  17. 0.384 IUP3 (SRR14708256)
  18. 0.383 BagSeed (RSP12501)
  19. 0.382 R3in134 (SRR14708218)
  20. 0.382 VIR 223 - Bernburgskaya Odnodomnaya - bm (SRR14708217)

Most genetically distant strains (Base Tree)

0 0.108 0.217 0.325 0.433
clone distance sibling distance more distant
  1. 0.411 JL yellow (RSP11075)
  2. 0.380 RKM-2018-028 (RSP11120)
  3. 0.377 Hermaphrodite Research Sample1 (RSP11049)
  4. 0.375 RKM-2018-022 (RSP11114)
  5. 0.375 Carmagnola (RSP11037)
  6. 0.371 Skunk#18 (RSP11038)
  7. 0.369 Monoica (RSP10241)
  8. 0.369 Black Beauty (RSP11035)
  9. 0.369 Feral (RSP10890)
  10. 0.367 RKM-2018-002 (RSP11093)
  11. 0.367 RKM-2018-018 (RSP11110)
  12. 0.365 RKM-2018-034 (RSP11126)
  13. 0.365 KYRG-11 (RSP11051)
  14. 0.362 Kush Hemp E1 (RSP11128)
  15. 0.361 Skywalker OG (RSP10837)
  16. 0.361 Italian Kiss (RSP11034)
  17. 0.359 USO 31 (RSP10981)
  18. 0.358 RKM-2018-026 (RSP11118)
  19. 0.358 Fedora 17 (RSP10661)
  20. 0.356 Kyrgyz Gold (RSP11054)

Nearest genetic relative in Phylos dataset

Phylos Strain SRR8346935
Overlapping SNPs:
66
Concordance:
48

Nearest genetic relative in Lynch dataset

Lynch Strain SRR3495236
Overlapping SNPs:
6
Concordance:
6

Blockchain Registration Information

Transaction ID
43d5eaba79f446a11f5ec0e8ccb20e4114f9d34ee6f2047eeca3d80723ab7699
Stamping Certificate
Download PDF (845.5 KB)
SHASUM Hash
3fe4b8cd73e900ede24900b7a610bf9fcb2e92be0dfccd3ab199093251ddb1c9
QR code for RSP11350

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