Suver Haze

RSP 11364

Grower: TOKN CBD

General Information

Sample Name
TOKN-Suver Haze
Accession Date
November 18, 2019
Reported Plant Sex
Female

The strain rarity visualization shows how distant the strain is from the other cultivars in the Kannapedia database. The y-axis represents genetic distance, getting farther as you go up. The width of the visualization at any position along the y-axis shows how many strains there are in the database at that genetic distance. So, a common strain will have a more bottom-heavy shape, while uncommon and rare cultivars will have a visualization that is generally shifted towards the top.

Rarity: Uncommon
Most Distant Most Similar

Chemical Information

Cannabinoid and terpenoid information provided by the grower.

Cannabinoids

No information provided.

Terpenoids

No information provided.

Genetic Information

Plant Type
Type III

The bell curve in the heterozygosity visualization shows the distribution of heterozygosity levels for cannabis cultivars in the Kannapedia database. The green line shows where this particular strain fits within the distribution. Heterozygosity is associated with heterosis (aka hybrid vigor) but also leads to the production of more variable offspring. When plants have two genetically different parents, heterozygosity levels will be higher than if it has been inbred or backcrossed repeatedly.

Heterozygosity: 1.19%
Least Heterozygous Most Heterozygous

The ratio of reads mapped to Y-contigs to reads mapped to the whole Cannabis genome (Y-ratios) has been demonstrated to be strongly correlated with plant sex typing. This plot shows the distribution of Y-ratios for all samples in our database which were sequenced with the same method (panel or WGS) as this sample and where this sample falls in the distribution.

Y-Ratio Distribution: 0.0280
male female RSP11364

This chart represents the Illumina sequence coverage over the Bt/Bd allele. These are the three regions in the cannabis genome that impact THCA, CBDA, CBGA production. Coverage over the Active CBDAS gene is highly correlated with Type II and Type III plants as described by Etienne de Meijer. Coverage over the THCA gene is highly correlated with Type I and Type II plants but is anti-correlated with Type III plants. Type I plants require coverage over the inactive CBDA loci and no coverage over the Active CBDA gene. Lack of coverage over the Active CBDA and Active THCA allele are presumed to be Type IV plants (CBGA dominant). While deletions of entire THCAS and CBDAS genes are the most common Bt:Bd alleles observed, it is possible to have plants with these genes where functional expression of the enzyme is disrupted by deactivating point mutations (Kojoma et al. 2006).

Bt/Bd Allele Coverage

This chart represents the Illumina sequence coverage over the CBCA synthase gene.

CBCAS Coverage

Variants (THCAS, CBDAS, and CBCAS)

No variants to report

Variants (Select Genes of Interest)

PHL-2 c.1096G>A p.Ala366Thr missense variant moderate contig2621 340374

IGV: Start, Jump

G/A
NGS:
0.090
C90:
0.531
PHL-2 c.1166C>T p.Pro389Leu missense variant moderate contig2621 340444

IGV: Start, Jump

C/T
NGS:
0.011
C90:
0.057
PHL-2 c.1422C>A p.Asn474Lys missense variant moderate contig2621 340700

IGV: Start, Jump

C/A
NGS:
0.007
C90:
0.000
PHL-2 c.1642G>A p.Gly548Arg missense variant moderate contig2621 340920

IGV: Start, Jump

G/A
NGS:
0.004
C90:
0.000
PHL-2 c.3202A>C p.Thr1068Pro missense variant moderate contig2621 343245

IGV: Start, Jump

A/C
NGS:
0.053
C90:
0.000
PHL-2 c.3209A>G p.Gln1070Arg missense variant moderate contig2621 343252

IGV: Start, Jump

A/G
NGS:
0.103
C90:
0.885
PKSG-2b

UniProt

c.934C>G p.His312Asp missense variant moderate contig700 1950704

IGV: Start, Jump

G/C
NGS:
0.410
C90:
0.000
PKSG-2b

UniProt

c.31A>T p.Thr11Ser missense variant moderate contig700 1951851

IGV: Start, Jump

T/A
NGS:
0.844
C90:
0.880
PKSG-2b

UniProt

c.-2_1dupATA start lost & conservative inframe insertion high contig700 1951880

IGV: Start, Jump

A/ATAT
NGS:
0.410
C90:
0.000
PKSG-4b

UniProt

c.496A>G p.Lys166Glu missense variant moderate contig700 2721177

IGV: Start, Jump

T/C
NGS:
0.651
C90:
0.684
PKSG-4b

UniProt

c.489delT p.Phe163fs frameshift variant high contig700 2721183

IGV: Start, Jump

CA/C
NGS:
0.792
C90:
0.761
PKSG-4b

UniProt

c.485A>G p.Lys162Arg missense variant moderate contig700 2721188

IGV: Start, Jump

T/C
NGS:
0.643
C90:
0.301
DXR-1

UniProt

c.20G>T p.Cys7Phe missense variant moderate contig380 235947

IGV: Start, Jump

C/A
NGS:
0.020
C90:
0.000
ELF3

UniProt

c.574A>G p.Asn192Asp missense variant moderate contig97 242280

IGV: Start, Jump

A/G
NGS:
0.042
C90:
0.579
ELF3

UniProt

c.1466G>A p.Ser489Asn missense variant moderate contig97 244297

IGV: Start, Jump

G/A
NGS:
0.123
C90:
0.000
ELF3

UniProt

c.1803_1805delTCA p.His601del disruptive inframe deletion moderate contig97 244625

IGV: Start, Jump

ACAT/A
NGS:
0.092
C90:
0.000
ELF3

UniProt

c.1966C>G p.Pro656Ala missense variant moderate contig97 244797

IGV: Start, Jump

C/G
NGS:
0.123
C90:
0.632
aPT4

UniProt

c.235_236delGT p.Val79fs frameshift variant high contig121 2829030

IGV: Start, Jump

ATG/A
NGS:
0.417
C90:
0.000
aPT4

UniProt

c.238delT p.Ser80fs frameshift variant high contig121 2829034

IGV: Start, Jump

AT/A
NGS:
0.421
C90:
0.000
aPT4

UniProt

c.302A>G p.Asn101Ser missense variant moderate contig121 2829099

IGV: Start, Jump

A/G
NGS:
0.349
C90:
0.000
aPT4

UniProt

c.1168T>C p.Tyr390His missense variant moderate contig121 2833503

IGV: Start, Jump

T/C
NGS:
0.546
C90:
0.000
aPT1

UniProt

c.406A>G p.Ile136Val missense variant moderate contig121 2839605

IGV: Start, Jump

A/G
NGS:
0.579
C90:
0.761
aPT1

UniProt

c.629C>T p.Thr210Ile missense variant moderate contig121 2840237

IGV: Start, Jump

C/T
NGS:
0.561
C90:
0.598
HDS-2

UniProt

c.82_93delGTAACCGGAACT p.Val28_Thr31del conservative inframe deletion moderate contig95 1989748

IGV: Start, Jump

CGTAACCGGAACT/C
NGS:
0.805
C90:
0.000
HDS-2

UniProt

c.127T>G p.Ser43Ala missense variant moderate contig95 1989794

IGV: Start, Jump

T/G
NGS:
0.721
C90:
0.000
AAE1-2

UniProt

c.331A>G p.Asn111Asp missense variant moderate contig81 209293

IGV: Start, Jump

A/G
NGS:
0.123
C90:
0.000
AAE1-2

UniProt

c.1006A>G p.Lys336Glu missense variant moderate contig81 209968

IGV: Start, Jump

A/G
NGS:
0.116
C90:
0.000
AAE1-2

UniProt

c.1102C>A p.His368Asn missense variant moderate contig81 210064

IGV: Start, Jump

C/A
NGS:
0.033
C90:
0.000
Edestin

UniProt

c.16T>C p.Ser6Pro missense variant moderate contig850 3065274

IGV: Start, Jump

A/G
NGS:
0.059
C90:
0.000
TFL1

UniProt

c.304G>A p.Asp102Asn missense variant & splice region variant moderate contig1636 520613

IGV: Start, Jump

C/T
NGS:
0.024
C90:
0.000
TFL1

UniProt

c.302-1G>A splice acceptor variant & intron variant high contig1636 520616

IGV: Start, Jump

C/T
NGS:
0.103
C90:
0.794
HDS-1

UniProt

c.1618A>G p.Ile540Val missense variant moderate contig1891 885936

IGV: Start, Jump

T/C
NGS:
0.099
C90:
0.861
HDS-1

UniProt

c.1378G>A p.Val460Ile missense variant moderate contig1891 886370

IGV: Start, Jump

C/T
NGS:
0.167
C90:
0.000
HDS-1

UniProt

c.136G>A p.Val46Ile missense variant moderate contig1891 889256

IGV: Start, Jump

C/T
NGS:
0.088
C90:
0.593
HDS-1

UniProt

c.56C>G p.Ala19Gly missense variant moderate contig1891 889336

IGV: Start, Jump

G/C
NGS:
0.125
C90:
0.943
FT

UniProt

c.35_43dupATAATAATA p.Asn12_Asn14dup disruptive inframe insertion moderate contig1561 3124441

IGV: Start, Jump

T/TTAATAATAA
NGS:
0.048
C90:
0.000
FT

UniProt

c.32_43dupATAATAATAATA p.Asn11_Asn14dup disruptive inframe insertion moderate contig1561 3124441

IGV: Start, Jump

T/TTAATAATAATAA
NGS:
0.066
C90:
0.000
FLD

UniProt

c.2981T>C p.Met994Thr missense variant moderate contig1450 2044012

IGV: Start, Jump

A/G
NGS:
0.064
C90:
0.478
FLD

UniProt

c.2962G>A p.Asp988Asn missense variant moderate contig1450 2044031

IGV: Start, Jump

C/T
NGS:
0.009
C90:
0.000
AAE1-3

UniProt

c.722G>A p.Arg241Lys missense variant moderate contig976 1083132

IGV: Start, Jump

C/T
NGS:
0.070
C90:
0.000
GGR

UniProt

c.362A>T p.Tyr121Phe missense variant moderate contig2282 549354

IGV: Start, Jump

A/T
NGS:
0.029
C90:
0.000
PKSB-3

UniProt

c.1652A>G p.Glu551Gly missense variant moderate contig93 3339759

IGV: Start, Jump

A/G
NGS:
0.088
C90:
0.000

Nearest genetic relatives (All Samples)

0 0.050 0.100 0.150 0.200
clone distance sibling distance more distant
  1. 0.108 Doug s Varin (RSP11243)
  2. 0.139 FL30 (RSP11361)
  3. 0.147 Cherry Wine (RSP11305)
  4. 0.149 Cherry Wine (RSP11307)
  5. 0.159 Blue Dream (RSP11004)
  6. 0.160 Serious Happiness (RSP10763)
  7. 0.167 Queen Dream CBG (RSP11296)
  8. 0.168 Domnesia (RSP11184)
  9. 0.172 101st AIRBORN CBD (RSP11350)
  10. 0.175 Blue Dream (RSP11017)
  11. 0.176 Cherry Blossom (RSP11332)
  12. 0.178 Midnight (RSP10941)
  13. 0.180 Hot Blonde (RSP11292)
  14. 0.180 Durban Poison 1 (RSP11013)
  15. 0.180 Unknown- Cherry Wine - 005 (RSP11272)
  16. 0.183 Cherry Blossom (RSP11299)
  17. 0.185 Queen Dream CBG (RSP11285)
  18. 0.188 Alaska (RSP10939)
  19. 0.190 Queen Dream CBG (RSP11281)
  20. 0.190 Queen Dream CBG (RSP11297)

Nearest genetic relatives (Base Tree)

0 0.075 0.150 0.225 0.300
clone distance sibling distance more distant
  1. 0.189 Liberty Haze (RSP11000)
  2. 0.202 Blueberry Cheesecake (RSP10684)
  3. 0.223 UP Sunrise (RSP10989)
  4. 0.232 Gold Cracker (RSP11048)
  5. 0.235 Durban Poison (RSP11014)
  6. 0.242 Cbot-2019-001 (RSP11129)
  7. 0.255 QUEEN JESUS (RSP10105)
  8. 0.261 CST (RSP11002)
  9. 0.261 Cherry (RSP11143)
  10. 0.271 Kimbo Slice (RSP10997)
  11. 0.273 Golden Goat 2 (RSP10991)
  12. 0.274 Recon (RSP10755)
  13. 0.276 Blue Dream (RSP11033)
  14. 0.277 RKM-2018-031 (RSP11123)
  15. 0.284 RKM-2018-027 (RSP11119)
  16. 0.286 Cbot-2019-004 (RSP11132)
  17. 0.286 RKM-2018-003 (RSP11094)
  18. 0.290 RKM-2018-020 (RSP11112)
  19. 0.293 RKM-2018-005 (RSP11096)
  20. 0.293 Cherry (RSP11142)

Most genetically distant strains (All Samples)

0 0.108 0.217 0.325 0.433
clone distance sibling distance more distant
  1. 0.429 80E (RSP11213)
  2. 0.415 80E (RSP11211)
  3. 0.412 JL yellow (RSP11075)
  4. 0.408 Feral (RSP11205)
  5. 0.407 80E (RSP11212)
  6. 0.393 JL 3rd Gen Mother (RSP11214)
  7. 0.388 Carmagnola (RSP11037)
  8. 0.385 Santhica27 (RSP10056)
  9. 0.384 Chem 91 (RSP11185)
  10. 0.384 USO31 (RSP10233)
  11. 0.383 CS (RSP11208)
  12. 0.381 RKM-2018-026 (RSP11118)
  13. 0.380 Feral (RSP10890)
  14. 0.378 White Label 1 (RSP11336)
  15. 0.377 Feral (RSP10891)
  16. 0.377 Carmagnola (RSP10980)
  17. 0.377 Carmaleonte (RSP11207)
  18. 0.377 Arcata Trainwreck (RSP11176)
  19. 0.375 Red Eye OG (RSP11190)
  20. 0.374 USO 31 (RSP10983)

Most genetically distant strains (Base Tree)

0 0.108 0.217 0.325 0.433
clone distance sibling distance more distant
  1. 0.410 JL yellow (RSP11075)
  2. 0.388 RKM-2018-026 (RSP11118)
  3. 0.387 Carmagnola (RSP11037)
  4. 0.378 Skywalker OG (RSP10837)
  5. 0.376 Santhica27 (RSP11047)
  6. 0.375 Kush Hemp E1 (RSP11128)
  7. 0.373 Feral (RSP10890)
  8. 0.373 USO 31 (RSP10981)
  9. 0.372 Monoica (RSP10241)
  10. 0.368 RKM-2018-002 (RSP11093)
  11. 0.365 Futura 75 (RSP10664)
  12. 0.362 Fedora 17 (RSP10661)
  13. 0.359 Ivory (RSP10668)
  14. 0.359 Carmagnola (RSP10979)
  15. 0.355 RKM-2018-034 (RSP11126)
  16. 0.350 KYRG-11 (RSP11051)
  17. 0.349 Kyrgyz Gold (RSP11054)
  18. 0.349 Sour Raspberry (RSP10551)
  19. 0.347 RKM-2018-018 (RSP11110)
  20. 0.344 RKM-2018-022 (RSP11114)

Nearest genetic relative in Phylos dataset

Phylos Strain SRR4450115
Overlapping SNPs:
42
Concordance:
32

Nearest genetic relative in Lynch dataset

Lynch Strain SRR3495257
Overlapping SNPs:
7
Concordance:
7

Blockchain Registration Information

Transaction ID
1e2694d52d0819e8da2cae3ae442d441dc305018a243d178794ea3675f2b953b
Stamping Certificate
Download PDF (850.8 KB)
SHASUM Hash
6bbe42dcc706f8ce95fbdfd944c2454d2b0af2a9d2b9e5b4983d0c87ea61054c
QR code for RSP11364

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