Thank You Jerry
RSP 11459
Grower: Happy Valley
Summary
Thank You Jerry (RSP11459/Happy Valley) is a genetic Type I plant and its genetics appear uncommon. The sample's closest relative in the database is Domnesia (RSP11184/NETA) and it is a potential sibling. The heterozygosity rate is 1.06% which is average (43.4 percentile).
General Information
- Accession Date
- April 23, 2020
- Reported Plant Sex
- Female
- Report Type
- StrainSEEK v2 3.2Mb
The strain rarity visualization shows how distant the strain is from the other cultivars in the Kannapedia database. The y-axis represents genetic distance, getting farther as you go up. The width of the visualization at any position along the y-axis shows how many strains there are in the database at that genetic distance. So, a common strain will have a more bottom-heavy shape, while uncommon and rare cultivars will have a visualization that is generally shifted towards the top.
Chemical Information
Cannabinoid and terpenoid information provided by the grower.
Cannabinoids
No information provided.
Terpenoids
No information provided.
Genetic Information
- Plant Type
- Type I
File Downloads
The bell curve in the heterozygosity visualization shows the distribution of heterozygosity levels for cannabis cultivars in the Kannapedia database. The green line shows where this particular strain fits within the distribution. Heterozygosity is associated with heterosis (aka hybrid vigor) but also leads to the production of more variable offspring. When plants have two genetically different parents, heterozygosity levels will be higher than if it has been inbred or backcrossed repeatedly.
The ratio of reads mapped to Y-contigs to reads mapped to the whole Cannabis genome (Y-ratios) has been demonstrated to be strongly correlated with plant sex typing. This plot shows the distribution of Y-ratios for all samples in our database which were sequenced with the same method (panel or WGS) as this sample and where this sample falls in the distribution.

This chart represents the Illumina sequence coverage over the Bt/Bd allele. These are the three regions in the cannabis genome that impact THCA, CBDA, CBGA production. Coverage over the Active CBDAS gene is highly correlated with Type II and Type III plants as described by Etienne de Meijer. Coverage over the THCA gene is highly correlated with Type I and Type II plants but is anti-correlated with Type III plants. Type I plants require coverage over the inactive CBDA loci and no coverage over the Active CBDA gene. Lack of coverage over the Active CBDA and Active THCA allele are presumed to be Type IV plants (CBGA dominant). While deletions of entire THCAS and CBDAS genes are the most common Bt:Bd alleles observed, it is possible to have plants with these genes where functional expression of the enzyme is disrupted by deactivating point mutations (Kojoma et al. 2006).



This chart represents the Illumina sequence coverage over the CBCA synthase gene.

Variants (THCAS, CBDAS, and CBCAS)
Variants (Select Genes of Interest)
PKSG-2a | c.1105C>G | p.Pro369Ala | missense variant | moderate | contig700 | 1944285 | G/C |
|
PKSG-2a | c.995C>T | p.Ser332Phe | missense variant | moderate | contig700 | 1944395 | G/A | |
PKSG-2a | c.781T>A | p.Leu261Ile | missense variant | moderate | contig700 | 1944609 | A/T | |
PKSG-2a | c.774G>A | p.Met258Ile | missense variant | moderate | contig700 | 1944616 | C/T |
|
PKSG-2a | c.241G>A | p.Val81Met | missense variant | moderate | contig700 | 1945149 | C/T |
|
PKSG-2a | c.240T>G | p.Asp80Glu | missense variant | moderate | contig700 | 1945150 | A/C |
|
PKSG-2a | c.224A>G | p.Lys75Arg | missense variant | moderate | contig700 | 1945166 | T/C | |
PKSG-2a | c.188T>G | p.Ile63Ser | missense variant | moderate | contig700 | 1945202 | A/C |
|
PKSG-2a | c.188T>A | p.Ile63Asn | missense variant | moderate | contig700 | 1945202 | A/T |
|
PKSG-2a | c.187A>T | p.Ile63Phe | missense variant | moderate | contig700 | 1945203 | T/A |
|
PKSG-2a | c.167C>G | p.Thr56Ser | missense variant | moderate | contig700 | 1945223 | G/C |
|
PKSG-2a | c.67T>A | p.Phe23Ile | missense variant | moderate | contig700 | 1945567 | A/T | |
PKSG-2a | c.31A>T | p.Thr11Ser | missense variant | moderate | contig700 | 1945603 | T/A | |
PKSG-2b | c.1152T>A | p.Asn384Lys | missense variant | moderate | contig700 | 1950486 | A/T | |
PKSG-2b | c.1132C>G | p.Leu378Val | missense variant | moderate | contig700 | 1950506 | G/C |
|
PKSG-2b | c.1117A>G | p.Ile373Val | missense variant | moderate | contig700 | 1950521 | T/C | |
PKSG-2b | c.948T>G | p.Asp316Glu | missense variant | moderate | contig700 | 1950690 | A/C |
|
PKSG-2b | c.945T>G | p.Ser315Arg | missense variant | moderate | contig700 | 1950693 | A/C |
|
PKSG-2b | c.944G>A | p.Ser315Asn | missense variant | moderate | contig700 | 1950694 | C/T |
|
PKSG-2b | c.934C>G | p.His312Asp | missense variant | moderate | contig700 | 1950704 | G/C |
|
PKSG-2b | c.774G>A | p.Met258Ile | missense variant | moderate | contig700 | 1950864 | C/T | |
PKSG-2b | c.718T>A | p.Phe240Ile | missense variant | moderate | contig700 | 1950920 | A/T |
|
PKSG-2b | c.592A>G | p.Asn198Asp | missense variant | moderate | contig700 | 1951046 | T/C |
|
PKSG-2b | c.560C>T | p.Thr187Met | missense variant | moderate | contig700 | 1951078 | G/A |
|
PKSG-2b | c.558G>A | p.Met186Ile | missense variant | moderate | contig700 | 1951080 | C/T |
|
PKSG-2b | c.241G>A | p.Val81Met | missense variant | moderate | contig700 | 1951397 | C/T |
|
PKSG-2b | c.240T>G | p.Asp80Glu | missense variant | moderate | contig700 | 1951398 | A/C |
|
PKSG-2b | c.224A>G | p.Lys75Arg | missense variant | moderate | contig700 | 1951414 | T/C | |
PKSG-2b | c.188T>G | p.Ile63Ser | missense variant | moderate | contig700 | 1951450 | A/C |
|
PKSG-2b | c.187A>T | p.Ile63Phe | missense variant | moderate | contig700 | 1951451 | T/A |
|
PKSG-2b | c.167C>G | p.Thr56Ser | missense variant | moderate | contig700 | 1951471 | G/C | |
PKSG-2b | c.31A>T | p.Thr11Ser | missense variant | moderate | contig700 | 1951851 | T/A | |
PKSG-2b | c.-2_1dupATA | start lost & conservative inframe insertion | high | contig700 | 1951880 | A/ATAT |
|
|
PKSG-4b | c.496A>G | p.Lys166Glu | missense variant | moderate | contig700 | 2721177 | T/C | |
PKSG-4b | c.489delT | p.Phe163fs | frameshift variant | high | contig700 | 2721183 | CA/C | |
PKSG-4b | c.485A>G | p.Lys162Arg | missense variant | moderate | contig700 | 2721188 | T/C | |
PKSG-4b | c.431T>G | p.Val144Gly | missense variant | moderate | contig700 | 2721242 | A/C | |
PKSG-4b |
c.352_355del |
p.Thr118fs | frameshift variant | high | contig700 | 2721317 | CCTGT/C |
|
PKSG-4b | c.323A>G | p.Glu108Gly | missense variant | moderate | contig700 | 2721350 | T/C |
|
DXR-2 | c.1319T>C | p.Ile440Thr | missense variant | moderate | contig380 | 285250 | A/G |
|
DXR-2 | c.431C>G | p.Ala144Gly | missense variant | moderate | contig380 | 287760 | G/C | |
aPT4 | c.16G>A | p.Val6Ile | missense variant | moderate | contig121 | 2828672 | G/A |
|
aPT4 | c.35A>C | p.Gln12Pro | missense variant | moderate | contig121 | 2828691 | A/C |
|
aPT4 | c.97T>C | p.Tyr33His | missense variant | moderate | contig121 | 2828753 | T/C |
|
aPT4 | c.153A>C | p.Lys51Asn | missense variant | moderate | contig121 | 2828809 | A/C |
|
aPT4 | c.216A>T | p.Lys72Asn | missense variant | moderate | contig121 | 2828872 | A/T |
|
aPT4 |
c.235_236del |
p.Val79fs | frameshift variant | high | contig121 | 2829030 | ATG/A |
|
aPT4 | c.238delT | p.Ser80fs | frameshift variant | high | contig121 | 2829034 | AT/A |
|
aPT4 | c.302A>G | p.Asn101Ser | missense variant | moderate | contig121 | 2829099 | A/G |
|
aPT4 | c.1111C>A | p.Leu371Ile | missense variant | moderate | contig121 | 2833296 | C/A |
|
aPT4 | c.1168T>C | p.Tyr390His | missense variant | moderate | contig121 | 2833503 | T/C |
|
aPT1 | c.406A>G | p.Ile136Val | missense variant | moderate | contig121 | 2839605 | A/G | |
aPT1 | c.629C>T | p.Thr210Ile | missense variant | moderate | contig121 | 2840237 | C/T | |
HDS-2 |
c.82_93delGT |
p.Val28_Thr3 |
conservative inframe deletion | moderate | contig95 | 1989748 |
CGTAACCGGAAC |
|
HDS-2 | c.127T>G | p.Ser43Ala | missense variant | moderate | contig95 | 1989794 | T/G |
|
HDS-1 | c.1378G>A | p.Val460Ile | missense variant | moderate | contig1891 | 886370 | C/T |
|
HDS-1 |
c.-108+1_-10 |
splice donor variant & intron variant | high | contig1891 | 889975 | A/AC |
|
Nearest genetic relatives (All Samples)
- 0.168 Blueberry Cheesecake (RSP10684)
- 0.168 C Temple (RSP11643)
- 0.173 Electra (RSP11366)
- 0.174 Domnesia (RSP11184)
- 0.176 Serious Happiness (RSP10763)
- 0.177 Trump x Trump (RSP11466)
- 0.179 Lift (RSP11378)
- 0.184 RKM-2018-021 (RSP11113)
- 0.186 RKM-2018-017 (RSP11109)
- 0.186 GG4 (RSP12096)
- 0.186 GG#4 (RSP11461)
- 0.187 RKM-2018-032 (RSP11124)
- 0.190 CPH (RSP11367)
- 0.192 Super Lemon Haze (RSP11641)
- 0.195 Whitey (RSP11363)
- 0.197 Lime OG (RSP12101)
- 0.197 Rest (RSP11377)
- 0.197 Dog Patch (RSP11725)
- 0.200 Suver Haze (RSP11364)
- 0.202 CBG-#40 (RSP11444)
Nearest genetic relatives (Base Tree)
- 0.173 Blueberry Cheesecake (RSP10684)
- 0.191 RKM-2018-032 (RSP11124)
- 0.204 Liberty Haze (RSP11000)
- 0.221 UP Sunrise (RSP10989)
- 0.223 Durban Poison (RSP11014)
- 0.231 Golden Goat 2 (RSP10991)
- 0.236 Hermaphrodite Research Sample1 (RSP11049)
- 0.245 RKM-2018-020 (RSP11112)
- 0.247 RKM-2018-009 (RSP11100)
- 0.247 RKM-2018-033 (RSP11125)
- 0.257 RKM-2018-004 (RSP11096)
- 0.259 RKM-2018-002 (RSP11093)
- 0.262 Cbot-2019-004 (RSP11132)
- 0.264 Gold Cracker (RSP11048)
- 0.269 Blueberry Cheesecake (RSP10680)
- 0.269 CST (RSP11002)
- 0.271 The Gift (RSP10988)
- 0.271 RKM-2018-028 (RSP11120)
- 0.273 RKM-2018-034 (RSP11126)
- 0.274 RKM-2018-003 (RSP11094)
Most genetically distant strains (All Samples)
- 0.449 JL yellow (RSP11075)
- 0.429 JL 3rd Gen Mother (RSP11214)
- 0.426 80E (RSP11213)
- 0.416 Cherry Blossom (RSP11317)
- 0.416 IUP2 (SRR14708257)
- 0.408 JL 3rd Gen Mother (RSP11197)
- 0.406 Tiger Tail -30- (RSP11484)
- 0.405 IUP3 (SRR14708256)
- 0.404 80E (RSP11212)
- 0.403 Unknown--Cherry Wine---003- (RSP11270)
- 0.402 JL 3rd Gen Father (RSP11196)
- 0.402 JL 4th Gen 5 (RSP11199)
- 0.401 Cherry Blossom (RSP11323)
- 0.399 R3in134 (SRR14708220)
- 0.399 IUP1 (SRR14708258)
- 0.398 R1in136 (SRR14708226)
- 0.397 JL 4th Gen 2 (RSP11194)
- 0.397 Tanao Sri-white -80- (RSP11621)
- 0.397 Feral (RSP11205)
- 0.397 Cherry Blossom (RSP11298)
Most genetically distant strains (Base Tree)
- 0.450 JL yellow (RSP11075)
- 0.393 Feral (RSP10890)
- 0.384 Carmagnola (RSP11037)
- 0.382 Monoica (RSP10241)
- 0.370 Ivory (RSP10668)
- 0.370 Cherry (RSP11142)
- 0.366 USO 31 (RSP10981)
- 0.365 Fedora 17 (RSP10661)
- 0.363 Futura 75 (RSP10664)
- 0.362 Kyrgyz Gold (RSP11054)
- 0.360 KYRG-11 (RSP11051)
- 0.357 Carmagnola (RSP10979)
- 0.353 Tisza (RSP11044)
- 0.353 Lovrin (RSP10658)
- 0.353 Santhica27 (RSP11047)
- 0.350 Jiangji (RSP10653)
- 0.349 RKM-2018-006 (RSP11097)
- 0.349 Skunk#18 (RSP11038)
- 0.342 RKM-2018-022 (RSP11114)
- 0.332 Kush Hemp E1 (RSP11128)
Nearest genetic relative in Phylos dataset
- Overlapping SNPs:
- 68
- Concordance:
- 47
Nearest genetic relative in Lynch dataset
- Overlapping SNPs:
- 2
- Concordance:
- 2
Blockchain Registration Information
- Transaction ID
-
44acf6324e4d39ee
243e024199f04f88 7f1a1c3c5a86c4ff 75f925861fd7380a - Stamping Certificate
- Download PDF (39.6 KB)
- SHASUM Hash
-
071b241904413597
b880ede08785071a 6dce1ce358ca7f0c 53bb36c62a539d4e