UnObtanium
RSP 11611
Grower: Kevin McKernan
General Information

- Accession Date
- June 23, 2020
- Reported Plant Sex
- not reported
- Report Type
- Whole-Genome Sequencing
The strain rarity visualization shows how distant the strain is from the other cultivars in the Kannapedia database. The y-axis represents genetic distance, getting farther as you go up. The width of the visualization at any position along the y-axis shows how many strains there are in the database at that genetic distance. So, a common strain will have a more bottom-heavy shape, while uncommon and rare cultivars will have a visualization that is generally shifted towards the top.
Chemical Information
Cannabinoid and terpenoid information provided by the grower.
Cannabinoids
No information provided.
Terpenoids
No information provided.
Genetic Information
- Plant Type
- Type II
File Downloads
The bell curve in the heterozygosity visualization shows the distribution of heterozygosity levels for cannabis cultivars in the Kannapedia database. The green line shows where this particular strain fits within the distribution. Heterozygosity is associated with heterosis (aka hybrid vigor) but also leads to the production of more variable offspring. When plants have two genetically different parents, heterozygosity levels will be higher than if it has been inbred or backcrossed repeatedly.
The ratio of reads mapped to Y-contigs to reads mapped to the whole Cannabis genome (Y-ratios) has been demonstrated to be strongly correlated with plant sex typing. This plot shows the distribution of Y-ratios for all samples in our database which were sequenced with the same method (panel or WGS) as this sample and where this sample falls in the distribution.

This chart represents the Illumina sequence coverage over the Bt/Bd allele. These are the three regions in the cannabis genome that impact THCA, CBDA, CBGA production. Coverage over the Active CBDAS gene is highly correlated with Type II and Type III plants as described by Etienne de Meijer. Coverage over the THCA gene is highly correlated with Type I and Type II plants but is anti-correlated with Type III plants. Type I plants require coverage over the inactive CBDA loci and no coverage over the Active CBDA gene. Lack of coverage over the Active CBDA and Active THCA allele are presumed to be Type IV plants (CBGA dominant). While deletions of entire THCAS and CBDAS genes are the most common Bt:Bd alleles observed, it is possible to have plants with these genes where functional expression of the enzyme is disrupted by deactivating point mutations (Kojoma et al. 2006).



This chart represents the Illumina sequence coverage over the CBCA synthase gene.

Variants (THCAS, CBDAS, and CBCAS)
No variants to report
Variants (Select Genes of Interest)
PKSG-2a | c.67T>A | p.Phe23Ile | missense variant | moderate | contig700 | 1945567 | A/T | |
PKSG-2a | c.31A>T | p.Thr11Ser | missense variant | moderate | contig700 | 1945603 | T/A | |
PKSG-2b | c.31A>T | p.Thr11Ser | missense variant | moderate | contig700 | 1951851 | T/A | |
PKSG-4b |
c.535_545del |
p.Ile179fs | frameshift variant | high | contig700 | 2721127 |
CCCCACTCCAAT |
|
PKSG-4b | c.496A>G | p.Lys166Glu | missense variant | moderate | contig700 | 2721177 | T/C | |
PKSG-4b | c.489delT | p.Phe163fs | frameshift variant | high | contig700 | 2721183 | CA/C | |
PKSG-4b | c.485A>G | p.Lys162Arg | missense variant | moderate | contig700 | 2721188 | T/C | |
PKSG-4b | c.431T>G | p.Val144Gly | missense variant | moderate | contig700 | 2721242 | A/C | |
PKSG-4b |
c.352_355del |
p.Thr118fs | frameshift variant | high | contig700 | 2721317 | CCTGT/C |
|
PKSG-4b | c.323A>G | p.Glu108Gly | missense variant | moderate | contig700 | 2721350 | T/C |
|
DXR-2 | c.1319T>C | p.Ile440Thr | missense variant | moderate | contig380 | 285250 | A/G |
|
DXR-2 | c.431C>G | p.Ala144Gly | missense variant | moderate | contig380 | 287760 | G/C | |
FAD2-2 | c.172G>T | p.Asp58Tyr | missense variant | moderate | contig83 | 1803197 | C/A |
|
FAD2-2 | c.161T>A | p.Leu54His | missense variant | moderate | contig83 | 1803208 | A/T |
|
ELF3 | c.358G>A | p.Gly120Arg | missense variant | moderate | contig97 | 242064 | G/A | |
ELF3 | c.430delC | p.Gln144fs | frameshift variant | high | contig97 | 242134 | GC/G |
|
ELF3 | c.520A>C | p.Asn174His | missense variant | moderate | contig97 | 242226 | A/C | |
ELF3 | c.574A>G | p.Asn192Asp | missense variant | moderate | contig97 | 242280 | A/G | |
ELF3 | c.772A>G | p.Ser258Gly | missense variant | moderate | contig97 | 242478 | A/G |
|
ELF3 | c.812G>C | p.Gly271Ala | missense variant | moderate | contig97 | 242518 | G/C | |
ELF3 |
c.1230-2_123 |
splice acceptor variant & intron variant | high | contig97 | 243676 | TAG/T | ||
ELF3 | c.1466G>A | p.Ser489Asn | missense variant | moderate | contig97 | 244297 | G/A |
|
ELF3 | c.1630A>G | p.Thr544Ala | missense variant | moderate | contig97 | 244461 | A/G | |
ELF3 | c.1966C>G | p.Pro656Ala | missense variant | moderate | contig97 | 244797 | C/G | |
ELF3 | c.2198G>T | p.Arg733Leu | missense variant | moderate | contig97 | 245029 | G/T | |
ELF3 | c.2216A>G | p.His739Arg | missense variant | moderate | contig97 | 245047 | A/G | |
aPT4 | c.16G>A | p.Val6Ile | missense variant | moderate | contig121 | 2828672 | G/A |
|
aPT4 | c.97T>C | p.Tyr33His | missense variant | moderate | contig121 | 2828753 | T/C |
|
aPT4 | c.153A>C | p.Lys51Asn | missense variant | moderate | contig121 | 2828809 | A/C |
|
aPT4 |
c.235_236del |
p.Val79fs | frameshift variant | high | contig121 | 2829030 | ATG/A |
|
aPT4 | c.238delT | p.Ser80fs | frameshift variant | high | contig121 | 2829034 | AT/A |
|
aPT4 | c.302A>G | p.Asn101Ser | missense variant | moderate | contig121 | 2829099 | A/G |
|
aPT4 | c.1168T>C | p.Tyr390His | missense variant | moderate | contig121 | 2833503 | T/C |
|
aPT1 |
c.95_97delGT |
p.Cys32del | disruptive inframe deletion | moderate | contig121 | 2835800 | ATGT/A | |
aPT1 | c.406A>G | p.Ile136Val | missense variant | moderate | contig121 | 2839605 | A/G | |
aPT1 | c.629C>T | p.Thr210Ile | missense variant | moderate | contig121 | 2840237 | C/T | |
HDS-2 |
c.82_93delGT |
p.Val28_Thr3 |
conservative inframe deletion | moderate | contig95 | 1989748 |
CGTAACCGGAAC |
|
HDS-2 | c.127T>G | p.Ser43Ala | missense variant | moderate | contig95 | 1989794 | T/G |
|
AAE1-2 | c.1006A>G | p.Lys336Glu | missense variant | moderate | contig81 | 209968 | A/G |
|
AAE1-2 | c.1118C>G | p.Thr373Ser | missense variant | moderate | contig81 | 210080 | C/G |
|
AAE1-2 | c.1541T>C | p.Val514Ala | missense variant | moderate | contig81 | 210503 | T/C |
|
PHL-1 | c.2651C>T | p.Ala884Val | missense variant | moderate | contig1439 | 1487146 | G/A | |
PHL-1 | c.2623A>G | p.Thr875Ala | missense variant | moderate | contig1439 | 1487174 | T/C |
|
PHL-1 | c.2561A>T | p.Asn854Ile | missense variant | moderate | contig1439 | 1487236 | T/A | |
PHL-1 | c.1387A>G | p.Thr463Ala | missense variant | moderate | contig1439 | 1489811 | T/C | |
Edestin | c.16T>C | p.Ser6Pro | missense variant | moderate | contig850 | 3065274 | A/G |
|
HDS-1 | c.1618A>G | p.Ile540Val | missense variant | moderate | contig1891 | 885936 | T/C | |
HDS-1 | c.1378G>A | p.Val460Ile | missense variant | moderate | contig1891 | 886370 | C/T |
|
HDS-1 | c.136G>A | p.Val46Ile | missense variant | moderate | contig1891 | 889256 | C/T | |
HDS-1 | c.56C>G | p.Ala19Gly | missense variant | moderate | contig1891 | 889336 | G/C | |
HDS-1 | c.35G>A | p.Cys12Tyr | missense variant | moderate | contig1891 | 889357 | C/T | |
HDS-1 |
c.-108+1_-10 |
splice donor variant & intron variant | high | contig1891 | 889975 | A/AC |
|
|
FT |
c.32_43dupAT |
p.Asn11_Asn1 |
disruptive inframe insertion | moderate | contig1561 | 3124441 |
T/TTAATAATAA |
|
PIE1-1 | c.6725C>T | p.Ala2242Val | missense variant | moderate | contig1225 | 2289290 | C/T | |
PKSB-3 | c.1266delA | p.Gly423fs | frameshift variant | high | contig93 | 3339372 | GA/G |
|
Nearest genetic relatives (All Samples)
- 0.108 Doug s Varin (RSP11243)
- 0.110 Serious Happiness (RSP10763)
- 0.123 Electra (RSP11366)
- 0.125 Blue Dream (RSP11009)
- 0.131 Domnesia (RSP11184)
- 0.132 Blue Dream (RSP11017)
- 0.133 Super Blue Dream (RSP11011)
- 0.133 Blue Dream (RSP11004)
- 0.134 Lift (RSP11378)
- 0.135 Blue Dream (RSP11006)
- 0.135 Blueberry Cheesecake (RSP10684)
- 0.142 JL 4th Gen 7 (RSP11153)
- 0.145 Blue Dream (RSP11010)
- 0.147 Joy (RSP11380)
- 0.151 Blue Dream (RSP11008)
- 0.154 CBG- 40 (RSP11444)
- 0.160 Liberty Haze (RSP11000)
- 0.163 Blue Dream (RSP11007)
- 0.164 Blue Dream (RSP11012)
- 0.164 Durban Poison 1 (RSP10996)
Nearest genetic relatives (Base Tree)
- 0.156 Blueberry Cheesecake (RSP10684)
- 0.165 Liberty Haze (RSP11000)
- 0.167 Durban Poison (RSP11014)
- 0.188 Golden Goat 2 (RSP10991)
- 0.198 UP Sunrise (RSP10989)
- 0.199 Gold Cracker (RSP11048)
- 0.207 RKM-2018-020 (RSP11112)
- 0.207 RKM-2018-033 (RSP11125)
- 0.217 Blue Dream (RSP11033)
- 0.233 Hermaphrodite ResearchSample2 (RSP11050)
- 0.233 RKM-2018-027 (RSP11119)
- 0.233 CST (RSP11002)
- 0.235 RKM-2018-023 (RSP11115)
- 0.239 QUEEN JESUS (RSP10105)
- 0.242 Hermaphrodite Research Sample1 (RSP11049)
- 0.245 RKM-2018-003 (RSP11094)
- 0.247 Skunk 18 (RSP11038)
- 0.248 Cbot-2019-006 (RSP11134)
- 0.249 Recon (RSP10755)
- 0.254 RKM-2018-018 (RSP11110)
Most genetically distant strains (All Samples)
- 0.418 80E (RSP11213)
- 0.416 80E (RSP11212)
- 0.402 Feral (RSP11205)
- 0.399 80E (RSP11211)
- 0.390 Cherry Blossom (RSP11323)
- 0.389 CS (RSP11208)
- 0.389 Chem 91 (RSP11185)
- 0.388 Chematonic Cannatonic x Chemdawg (RSP11394)
- 0.382 Feral (RSP10891)
- 0.376 Tanao Sri 46 (RSP11486)
- 0.375 Feral (RSP11206)
- 0.375 Cherry Blossom (RSP11306)
- 0.375 Carmaleonte (RSP11207)
- 0.370 Feral (RSP10890)
- 0.369 Carmagnola (RSP11202)
- 0.369 Feral (RSP10892)
- 0.365 Cherry Blossom (RSP11333)
- 0.364 Red Eye OG (RSP11190)
- 0.364 Cherry Blossom (RSP11317)
- 0.363 RKM-2018-012 (RSP11103)
Most genetically distant strains (Base Tree)
- 0.381 Kush Hemp E1 (RSP11128)
- 0.381 Feral (RSP10890)
- 0.374 Cbot-2019-005 (RSP11133)
- 0.372 Carmagnola (RSP11037)
- 0.367 Santhica27 (RSP11047)
- 0.361 RKM-2018-026 (RSP11118)
- 0.358 Carmagnola (RSP10979)
- 0.356 Monoica (RSP10241)
- 0.353 Lovrin (RSP10658)
- 0.345 Futura 75 (RSP10664)
- 0.343 USO 31 (RSP10981)
- 0.341 Fedora 17 (RSP10661)
- 0.341 KYRG-11 (RSP11051)
- 0.339 Skywalker OG (RSP10837)
- 0.339 Ivory (RSP10668)
- 0.336 JL yellow (RSP11075)
- 0.334 Kyrgyz Gold (RSP11054)
- 0.327 RKM-2018-006 (RSP11097)
- 0.325 Tisza (RSP11044)
- 0.322 Jiangji (RSP10653)
Nearest genetic relative in Phylos dataset
- Overlapping SNPs:
- 47
- Concordance:
- 36
Nearest genetic relative in Lynch dataset
- Overlapping SNPs:
- 9
- Concordance:
- 9
Blockchain Registration Information
- SHASUM Hash
-
88dbf848be299ff8
64dcb5d1d3b09210 9de300dd5aef7b37 36467931c18b21e3