Mother's Milk No. 31
RSP 11623
Grower: HendRx Farms
General Information
- Sample Name
- mm31-/7-20
- Accession Date
- July 28, 2020
- Reported Plant Sex
- Female
- Report Type
- StrainSEEK v2 3.2Mb
The strain rarity visualization shows how distant the strain is from the other cultivars in the Kannapedia database. The y-axis represents genetic distance, getting farther as you go up. The width of the visualization at any position along the y-axis shows how many strains there are in the database at that genetic distance. So, a common strain will have a more bottom-heavy shape, while uncommon and rare cultivars will have a visualization that is generally shifted towards the top.
Chemical Information
Cannabinoid and terpenoid information provided by the grower.
Cannabinoids
No information provided.
Terpenoids
No information provided.
Genetic Information
- Plant Type
- Type I
File Downloads
The bell curve in the heterozygosity visualization shows the distribution of heterozygosity levels for cannabis cultivars in the Kannapedia database. The green line shows where this particular strain fits within the distribution. Heterozygosity is associated with heterosis (aka hybrid vigor) but also leads to the production of more variable offspring. When plants have two genetically different parents, heterozygosity levels will be higher than if it has been inbred or backcrossed repeatedly.
The ratio of reads mapped to Y-contigs to reads mapped to the whole Cannabis genome (Y-ratios) has been demonstrated to be strongly correlated with plant sex typing. This plot shows the distribution of Y-ratios for all samples in our database which were sequenced with the same method (panel or WGS) as this sample and where this sample falls in the distribution.

This chart represents the Illumina sequence coverage over the Bt/Bd allele. These are the three regions in the cannabis genome that impact THCA, CBDA, CBGA production. Coverage over the Active CBDAS gene is highly correlated with Type II and Type III plants as described by Etienne de Meijer. Coverage over the THCA gene is highly correlated with Type I and Type II plants but is anti-correlated with Type III plants. Type I plants require coverage over the inactive CBDA loci and no coverage over the Active CBDA gene. Lack of coverage over the Active CBDA and Active THCA allele are presumed to be Type IV plants (CBGA dominant). While deletions of entire THCAS and CBDAS genes are the most common Bt:Bd alleles observed, it is possible to have plants with these genes where functional expression of the enzyme is disrupted by deactivating point mutations (Kojoma et al. 2006).



This chart represents the Illumina sequence coverage over the CBCA synthase gene.

Variants (THCAS, CBDAS, and CBCAS)
Variants (Select Genes of Interest)
PKSG-2a | c.774G>A | p.Met258Ile | missense variant | moderate | contig700 | 1944616 | C/T |
|
PKSG-2a | c.241G>A | p.Val81Met | missense variant | moderate | contig700 | 1945149 | C/T |
|
PKSG-2a | c.240T>G | p.Asp80Glu | missense variant | moderate | contig700 | 1945150 | A/C |
|
PKSG-2a | c.230T>C | p.Val77Ala | missense variant | moderate | contig700 | 1945160 | A/G |
|
PKSG-2a | c.224A>G | p.Lys75Arg | missense variant | moderate | contig700 | 1945166 | T/C | |
PKSG-2a | c.67T>A | p.Phe23Ile | missense variant | moderate | contig700 | 1945567 | A/T | |
PKSG-2a | c.31A>T | p.Thr11Ser | missense variant | moderate | contig700 | 1945603 | T/A | |
PKSG-2b | c.1152T>A | p.Asn384Lys | missense variant | moderate | contig700 | 1950486 | A/T | |
PKSG-2b | c.1132C>G | p.Leu378Val | missense variant | moderate | contig700 | 1950506 | G/C |
|
PKSG-2b | c.1117A>G | p.Ile373Val | missense variant | moderate | contig700 | 1950521 | T/C | |
PKSG-2b | c.948T>G | p.Asp316Glu | missense variant | moderate | contig700 | 1950690 | A/C |
|
PKSG-2b | c.945T>G | p.Ser315Arg | missense variant | moderate | contig700 | 1950693 | A/C |
|
PKSG-2b | c.944G>A | p.Ser315Asn | missense variant | moderate | contig700 | 1950694 | C/T |
|
PKSG-2b | c.774G>A | p.Met258Ile | missense variant | moderate | contig700 | 1950864 | C/T | |
PKSG-2b | c.241G>A | p.Val81Met | missense variant | moderate | contig700 | 1951397 | C/T |
|
PKSG-2b | c.240T>G | p.Asp80Glu | missense variant | moderate | contig700 | 1951398 | A/C |
|
PKSG-2b | c.230T>C | p.Val77Ala | missense variant | moderate | contig700 | 1951408 | A/G | |
PKSG-2b | c.224A>G | p.Lys75Arg | missense variant | moderate | contig700 | 1951414 | T/C | |
PKSG-2b | c.188T>G | p.Ile63Ser | missense variant | moderate | contig700 | 1951450 | A/C |
|
PKSG-2b | c.187A>T | p.Ile63Phe | missense variant | moderate | contig700 | 1951451 | T/A |
|
PKSG-2b | c.31A>T | p.Thr11Ser | missense variant | moderate | contig700 | 1951851 | T/A | |
PKSG-4b | c.496A>G | p.Lys166Glu | missense variant | moderate | contig700 | 2721177 | T/C | |
PKSG-4b | c.489delT | p.Phe163fs | frameshift variant | high | contig700 | 2721183 | CA/C | |
PKSG-4b | c.485A>G | p.Lys162Arg | missense variant | moderate | contig700 | 2721188 | T/C | |
PKSG-4b | c.431T>G | p.Val144Gly | missense variant | moderate | contig700 | 2721242 | A/C | |
PKSG-4b | c.419A>G | p.Asp140Gly | missense variant | moderate | contig700 | 2721254 | T/C | |
PKSG-4b |
c.352_355del |
p.Thr118fs | frameshift variant | high | contig700 | 2721317 | CCTGT/C |
|
PKSG-4b | c.323A>G | p.Glu108Gly | missense variant | moderate | contig700 | 2721350 | T/C |
|
DXR-2 | c.1319T>C | p.Ile440Thr | missense variant | moderate | contig380 | 285250 | A/G |
|
DXR-2 | c.431C>G | p.Ala144Gly | missense variant | moderate | contig380 | 287760 | G/C | |
aPT4 | c.35A>C | p.Gln12Pro | missense variant | moderate | contig121 | 2828691 | A/C |
|
aPT4 | c.97T>C | p.Tyr33His | missense variant | moderate | contig121 | 2828753 | T/C |
|
aPT4 | c.153A>C | p.Lys51Asn | missense variant | moderate | contig121 | 2828809 | A/C |
|
aPT4 | c.198A>C | p.Lys66Asn | missense variant | moderate | contig121 | 2828854 | A/C |
|
aPT4 | c.216A>T | p.Lys72Asn | missense variant | moderate | contig121 | 2828872 | A/T |
|
aPT4 |
c.235_236del |
p.Val79fs | frameshift variant | high | contig121 | 2829030 | ATG/A |
|
aPT4 | c.238delT | p.Ser80fs | frameshift variant | high | contig121 | 2829034 | AT/A |
|
aPT4 | c.626A>G | p.Asn209Ser | missense variant | moderate | contig121 | 2830904 | A/G |
|
aPT4 | c.1168T>C | p.Tyr390His | missense variant | moderate | contig121 | 2833503 | T/C |
|
aPT1 | c.160A>C | p.Thr54Pro | missense variant | moderate | contig121 | 2835867 | A/C | |
aPT1 | c.406A>G | p.Ile136Val | missense variant | moderate | contig121 | 2839605 | A/G | |
aPT1 | c.670T>A | p.Ser224Thr | missense variant | moderate | contig121 | 2840278 | T/A |
|
aPT1 | c.727G>T | p.Glu243* | stop gained | high | contig121 | 2841362 | G/T | |
HDS-2 |
c.82_93delGT |
p.Val28_Thr3 |
conservative inframe deletion | moderate | contig95 | 1989748 |
CGTAACCGGAAC |
|
HDS-2 | c.127T>G | p.Ser43Ala | missense variant | moderate | contig95 | 1989794 | T/G |
|
HDS-1 |
c.-108+1_-10 |
splice donor variant & intron variant | high | contig1891 | 889975 | A/AC |
|
Nearest genetic relatives (All Samples)
- 0.092 Mothers Milk 5 (RSP11186)
- 0.175 RKM-2018-002 (RSP11093)
- 0.176 501st OG (RSP11241)
- 0.180 JL Cross 11 (RSP11512)
- 0.187 Chem 91 (RSP11185)
- 0.189 Super Sour Diesel (RSP11191)
- 0.189 Headcheese (RSP11192)
- 0.196 JL Cross 10 (RSP11511)
- 0.203 Tahoe OG (RSP11189)
- 0.205 SHERBERT (RSP11355)
- 0.207 Star Dawg (RSP11352)
- 0.210 GG 4 (RSP11461)
- 0.210 East Coast Sour Diesel (RSP10243)
- 0.213 Domnesia (RSP11184)
- 0.216 Rugburn OG (RSP11353)
- 0.220 RKM-2018-017 (RSP11109)
- 0.221 RKM-2018-021 (RSP11113)
- 0.222 RKM-2018-032 (RSP11124)
- 0.224 RKM-2018-012 (RSP11103)
- 0.225 NSPM1 (RSP11362)
Nearest genetic relatives (Base Tree)
- 0.180 RKM-2018-002 (RSP11093)
- 0.228 RKM-2018-032 (RSP11124)
- 0.232 RKM-2018-009 (RSP11100)
- 0.242 RKM-2018-005 (RSP11096)
- 0.246 Skywalker OG (RSP10837)
- 0.247 Blueberry Cheesecake (RSP10684)
- 0.252 Blueberry Cheesecake (RSP10680)
- 0.260 Hermaphrodite ResearchSample2 (RSP11050)
- 0.267 Pie Hoe (RSP11073)
- 0.270 RKM-2018-026 (RSP11118)
- 0.272 Gold Cracker (RSP11048)
- 0.273 RKM-2018-020 (RSP11112)
- 0.277 Hermaphrodite Research Sample1 (RSP11049)
- 0.286 Durban Poison (RSP11014)
- 0.289 UP Sunrise (RSP10989)
- 0.290 Liberty Haze (RSP11000)
- 0.293 RKM-2018-033 (RSP11125)
- 0.297 RKM-2018-034 (RSP11126)
- 0.308 Sour Raspberry (RSP10551)
- 0.311 Blue Dream (RSP11033)
Most genetically distant strains (All Samples)
- 0.471 Tiger Tail 78 (RSP11619)
- 0.469 Tanao Sri-white 80 (RSP11621)
- 0.465 Squirrel Tail 81 (RSP11622)
- 0.461 JL 3rd Gen Father (RSP11196)
- 0.458 Cherry Blossom (RSP11314)
- 0.457 Tanao Sri 46 (RSP11486)
- 0.452 Tiger Tail 30 (RSP11484)
- 0.450 CS (RSP11208)
- 0.449 Cherry Blossom (RSP11311)
- 0.448 80E (RSP11213)
- 0.446 Unknown- Cherry Wine - 001 (RSP11268)
- 0.443 Feral (RSP10892)
- 0.441 R3 (RSP11616)
- 0.441 Cherry Blossom (RSP11274)
- 0.441 Cherry Blossom (RSP11317)
- 0.440 Tanao Sri-white 79 (RSP11620)
- 0.440 USO 31 (RSP10983)
- 0.437 R4 (RSP11617)
- 0.437 Squirrel Tail 31 (RSP11485)
- 0.437 Feral (RSP11205)
Most genetically distant strains (Base Tree)
- 0.444 JL yellow (RSP11075)
- 0.431 Ivory (RSP10668)
- 0.427 USO 31 (RSP10981)
- 0.426 Futura 75 (RSP10664)
- 0.425 Cbot-2019-005 (RSP11133)
- 0.420 Santhica27 (RSP11047)
- 0.419 Fedora 17 (RSP10661)
- 0.419 Monoica (RSP10241)
- 0.419 Feral (RSP10890)
- 0.419 Carmagnola (RSP11037)
- 0.413 Lovrin (RSP10658)
- 0.407 KYRG-11 (RSP11051)
- 0.403 RKM-2018-022 (RSP11114)
- 0.403 Black Beauty (RSP11035)
- 0.399 Cherry (RSP11142)
- 0.397 Carmagnola (RSP10979)
- 0.396 Cherry (RSP11143)
- 0.393 RKM-2018-019 (RSP11111)
- 0.393 Jiangji (RSP10653)
- 0.387 Tygra (RSP10667)
Nearest genetic relative in Phylos dataset
- Overlapping SNPs:
- 88
- Concordance:
- 77
Nearest genetic relative in Lynch dataset
- Overlapping SNPs:
- 5
- Concordance:
- 5
Blockchain Registration Information
- SHASUM Hash
-
0c7ba4ab06477e20
5300414d38cbfd3c c9e002c885e3d0b6 4bfb8e99922cfb86