Eagle Scout T-111
RSP 11625
Grower: HendRx Farms
General Information
- Sample Name
- ESC-TIII-7-20
- Accession Date
- July 28, 2020
- Reported Plant Sex
- Female
- Report Type
- StrainSEEK v2 3.2Mb
The strain rarity visualization shows how distant the strain is from the other cultivars in the Kannapedia database. The y-axis represents genetic distance, getting farther as you go up. The width of the visualization at any position along the y-axis shows how many strains there are in the database at that genetic distance. So, a common strain will have a more bottom-heavy shape, while uncommon and rare cultivars will have a visualization that is generally shifted towards the top.
Chemical Information
Cannabinoid and terpenoid information provided by the grower.
Cannabinoids
No information provided.
Terpenoids
No information provided.
Genetic Information
- Plant Type
- Type I
File Downloads
The bell curve in the heterozygosity visualization shows the distribution of heterozygosity levels for cannabis cultivars in the Kannapedia database. The green line shows where this particular strain fits within the distribution. Heterozygosity is associated with heterosis (aka hybrid vigor) but also leads to the production of more variable offspring. When plants have two genetically different parents, heterozygosity levels will be higher than if it has been inbred or backcrossed repeatedly.
The ratio of reads mapped to Y-contigs to reads mapped to the whole Cannabis genome (Y-ratios) has been demonstrated to be strongly correlated with plant sex typing. This plot shows the distribution of Y-ratios for all samples in our database which were sequenced with the same method (panel or WGS) as this sample and where this sample falls in the distribution.

This chart represents the Illumina sequence coverage over the Bt/Bd allele. These are the three regions in the cannabis genome that impact THCA, CBDA, CBGA production. Coverage over the Active CBDAS gene is highly correlated with Type II and Type III plants as described by Etienne de Meijer. Coverage over the THCA gene is highly correlated with Type I and Type II plants but is anti-correlated with Type III plants. Type I plants require coverage over the inactive CBDA loci and no coverage over the Active CBDA gene. Lack of coverage over the Active CBDA and Active THCA allele are presumed to be Type IV plants (CBGA dominant). While deletions of entire THCAS and CBDAS genes are the most common Bt:Bd alleles observed, it is possible to have plants with these genes where functional expression of the enzyme is disrupted by deactivating point mutations (Kojoma et al. 2006).



This chart represents the Illumina sequence coverage over the CBCA synthase gene.

Variants (THCAS, CBDAS, and CBCAS)
Variants (Select Genes of Interest)
PKSG-2a | c.995C>T | p.Ser332Phe | missense variant | moderate | contig700 | 1944395 | G/A | |
PKSG-2a | c.241G>A | p.Val81Met | missense variant | moderate | contig700 | 1945149 | C/T |
|
PKSG-2a | c.240T>G | p.Asp80Glu | missense variant | moderate | contig700 | 1945150 | A/C |
|
PKSG-2a | c.230T>C | p.Val77Ala | missense variant | moderate | contig700 | 1945160 | A/G |
|
PKSG-2a | c.224A>G | p.Lys75Arg | missense variant | moderate | contig700 | 1945166 | T/C | |
PKSG-2a | c.188T>G | p.Ile63Ser | missense variant | moderate | contig700 | 1945202 | A/C |
|
PKSG-2a | c.188T>A | p.Ile63Asn | missense variant | moderate | contig700 | 1945202 | A/T |
|
PKSG-2a | c.67T>A | p.Phe23Ile | missense variant | moderate | contig700 | 1945567 | A/T | |
PKSG-2a | c.31A>T | p.Thr11Ser | missense variant | moderate | contig700 | 1945603 | T/A | |
PKSG-2b | c.1152T>A | p.Asn384Lys | missense variant | moderate | contig700 | 1950486 | A/T | |
PKSG-2b | c.1132C>G | p.Leu378Val | missense variant | moderate | contig700 | 1950506 | G/C |
|
PKSG-2b | c.1117A>G | p.Ile373Val | missense variant | moderate | contig700 | 1950521 | T/C | |
PKSG-2b | c.948T>G | p.Asp316Glu | missense variant | moderate | contig700 | 1950690 | A/C |
|
PKSG-2b | c.945T>G | p.Ser315Arg | missense variant | moderate | contig700 | 1950693 | A/C |
|
PKSG-2b | c.944G>A | p.Ser315Asn | missense variant | moderate | contig700 | 1950694 | C/T |
|
PKSG-2b | c.934C>G | p.His312Asp | missense variant | moderate | contig700 | 1950704 | G/C |
|
PKSG-2b | c.774G>A | p.Met258Ile | missense variant | moderate | contig700 | 1950864 | C/T | |
PKSG-2b | c.241G>A | p.Val81Met | missense variant | moderate | contig700 | 1951397 | C/T |
|
PKSG-2b | c.240T>G | p.Asp80Glu | missense variant | moderate | contig700 | 1951398 | A/C |
|
PKSG-2b | c.230T>C | p.Val77Ala | missense variant | moderate | contig700 | 1951408 | A/G | |
PKSG-2b | c.224A>G | p.Lys75Arg | missense variant | moderate | contig700 | 1951414 | T/C | |
PKSG-2b | c.31A>T | p.Thr11Ser | missense variant | moderate | contig700 | 1951851 | T/A | |
PKSG-2b | c.-2_1dupATA | start lost & conservative inframe insertion | high | contig700 | 1951880 | A/ATAT |
|
|
PKSG-4b |
c.535_545del |
p.Ile179fs | frameshift variant | high | contig700 | 2721127 |
CCCCACTCCAAT |
|
PKSG-4b | c.523C>T | p.His175Tyr | missense variant | moderate | contig700 | 2721150 | G/A | |
PKSG-4b | c.489delT | p.Phe163fs | frameshift variant | high | contig700 | 2721183 | CA/C | |
PKSG-4b |
c.353_354ins |
p.Gly119fs | frameshift variant | high | contig700 | 2721319 | T/TGG |
|
DXR-2 | c.1319T>C | p.Ile440Thr | missense variant | moderate | contig380 | 285250 | A/G |
|
DXR-2 | c.431C>G | p.Ala144Gly | missense variant | moderate | contig380 | 287760 | G/C | |
FAD2-2 | c.161T>A | p.Leu54His | missense variant | moderate | contig83 | 1803208 | A/T |
|
aPT4 | c.16G>A | p.Val6Ile | missense variant | moderate | contig121 | 2828672 | G/A |
|
aPT4 | c.35A>C | p.Gln12Pro | missense variant | moderate | contig121 | 2828691 | A/C |
|
aPT4 | c.97T>C | p.Tyr33His | missense variant | moderate | contig121 | 2828753 | T/C |
|
aPT4 | c.153A>C | p.Lys51Asn | missense variant | moderate | contig121 | 2828809 | A/C |
|
aPT4 |
c.235_236del |
p.Val79fs | frameshift variant | high | contig121 | 2829030 | ATG/A |
|
aPT4 | c.238delT | p.Ser80fs | frameshift variant | high | contig121 | 2829034 | AT/A |
|
aPT4 | c.302A>G | p.Asn101Ser | missense variant | moderate | contig121 | 2829099 | A/G |
|
aPT4 | c.1111C>A | p.Leu371Ile | missense variant | moderate | contig121 | 2833296 | C/A |
|
aPT4 | c.1168T>C | p.Tyr390His | missense variant | moderate | contig121 | 2833503 | T/C |
|
aPT1 | c.406A>G | p.Ile136Val | missense variant | moderate | contig121 | 2839605 | A/G | |
aPT1 | c.629C>T | p.Thr210Ile | missense variant | moderate | contig121 | 2840237 | C/T | |
HDS-2 |
c.82_93delGT |
p.Val28_Thr3 |
conservative inframe deletion | moderate | contig95 | 1989748 |
CGTAACCGGAAC |
|
HDS-2 | c.127T>G | p.Ser43Ala | missense variant | moderate | contig95 | 1989794 | T/G |
|
HDS-1 |
c.-108+1_-10 |
splice donor variant & intron variant | high | contig1891 | 889975 | A/AC |
|
Nearest genetic relatives (All Samples)
- 0.189 Arcata Trainwreck (RSP11176)
- 0.211 Serious Happiness (RSP10763)
- 0.230 Rest (RSP11377)
- 0.232 Domnesia (RSP11184)
- 0.239 RKM-2018-019 (RSP11111)
- 0.240 Lift (RSP11378)
- 0.241 Blue Dream (RSP11010)
- 0.241 RINGO S ANGEL (RSP10085)
- 0.241 Doug s Varin (RSP11243)
- 0.242 Wedding Cake x MAC (RSP11464)
- 0.242 North Traveler (RSP11163)
- 0.243 JABBA S STASH (RSP11348)
- 0.244 Kimbo Slice (RSP10997)
- 0.247 Tahoe OG (RSP11189)
- 0.248 Trump x Trump (RSP11466)
- 0.250 Strawberry Cough (RSP11356)
- 0.250 JL Cross 6 (RSP11507)
- 0.251 Blueberry Cheesecake (RSP10684)
- 0.251 Electra (RSP11366)
- 0.252 Blue Dream (RSP11017)
Nearest genetic relatives (Base Tree)
- 0.241 RKM-2018-019 (RSP11111)
- 0.246 Kimbo Slice (RSP10997)
- 0.246 The Gift (RSP10988)
- 0.257 Blueberry Cheesecake (RSP10684)
- 0.261 RKM-2018-005 (RSP11096)
- 0.272 Liberty Haze (RSP11000)
- 0.274 QUEEN JESUS (RSP10105)
- 0.276 RKM-2018-034 (RSP11126)
- 0.280 Blueberry Cheesecake (RSP10680)
- 0.281 RKM-2018-032 (RSP11124)
- 0.289 Golden Goat 2 (RSP10991)
- 0.290 RKM-2018-033 (RSP11125)
- 0.293 Recon (RSP10755)
- 0.294 Sour Raspberry (RSP10551)
- 0.295 Tygra (RSP10667)
- 0.295 RKM-2018-026 (RSP11118)
- 0.296 Hermaphrodite ResearchSample2 (RSP11050)
- 0.299 RKM-2018-029 (RSP11121)
- 0.302 RKM-2018-009 (RSP11100)
- 0.307 Tisza (RSP10659)
Most genetically distant strains (All Samples)
- 0.458 Cherry Blossom (RSP11328)
- 0.440 Cherry Blossom (RSP11323)
- 0.436 JL yellow (RSP11075)
- 0.435 Tanao Sri 46 (RSP11486)
- 0.431 Cherry Blossom (RSP11309)
- 0.427 Unknown- Cherry Wine - 001 (RSP11268)
- 0.423 Unknown- Cherry Wine - 003 (RSP11270)
- 0.422 JL 3rd Gen Mother (RSP11214)
- 0.419 Ringo s Gift Katie s Cut (RSP11624)
- 0.416 Cherry Blossom (RSP11301)
- 0.416 AVIDEKEL USA (RSP11169)
- 0.414 Unknown- Cherry Wine - 002 (RSP11269)
- 0.412 80E (RSP11213)
- 0.410 Tanao Sri-white 80 (RSP11621)
- 0.404 JL 3rd Gen Mother (RSP11197)
- 0.402 Cherry Blossom (RSP11306)
- 0.402 Lemon Skunk (RSP11229)
- 0.401 Cherry Blossom (RSP11298)
- 0.401 Chematonic Cannatonic x Chemdawg (RSP11394)
- 0.397 Tiger Tail 30 (RSP11484)
Most genetically distant strains (Base Tree)
- 0.435 JL yellow (RSP11075)
- 0.384 Cbot-2019-001 (RSP11129)
- 0.378 Cherry (RSP11143)
- 0.376 RKM-2018-006 (RSP11097)
- 0.365 RKM-2018-027 (RSP11119)
- 0.364 Cherry (RSP11142)
- 0.363 RKM-2018-002 (RSP11093)
- 0.359 Monoica (RSP10241)
- 0.357 Cbot-2019-005 (RSP11133)
- 0.357 Carmagnola (RSP10979)
- 0.357 Feral (RSP10890)
- 0.352 Santhica27 (RSP11047)
- 0.349 RKM-2018-028 (RSP11120)
- 0.346 Skunk 18 (RSP11038)
- 0.346 Italian Kiss (RSP11034)
- 0.344 Lovrin (RSP10658)
- 0.343 Futura 75 (RSP10664)
- 0.343 RKM-2018-003 (RSP11094)
- 0.343 Blue Dream (RSP11033)
- 0.342 USO 31 (RSP10981)
Nearest genetic relative in Phylos dataset
- Overlapping SNPs:
- 88
- Concordance:
- 53
Nearest genetic relative in Lynch dataset
- Overlapping SNPs:
- 8
- Concordance:
- 8
Blockchain Registration Information
- SHASUM Hash
-
546885c9919e1996
5c0627691b1b2d5e ef464d575fe1ae6d a8d16320368647ec