Eagle Scout T-111
RSP 11625
Grower: HendRx Farms
General Information
- Sample Name
- ESC-TIII-7-20
- Accession Date
- July 28, 2020
- Reported Plant Sex
- Female
- Report Type
- StrainSEEK v2 3.2Mb
The strain rarity visualization shows how distant the strain is from the other cultivars in the Kannapedia database. The y-axis represents genetic distance, getting farther as you go up. The width of the visualization at any position along the y-axis shows how many strains there are in the database at that genetic distance. So, a common strain will have a more bottom-heavy shape, while uncommon and rare cultivars will have a visualization that is generally shifted towards the top.
Chemical Information
Cannabinoid and terpenoid information provided by the grower.
Cannabinoids
No information provided.
Terpenoids
No information provided.
Genetic Information
- Plant Type
- Type I
File Downloads
The bell curve in the heterozygosity visualization shows the distribution of heterozygosity levels for cannabis cultivars in the Kannapedia database. The green line shows where this particular strain fits within the distribution. Heterozygosity is associated with heterosis (aka hybrid vigor) but also leads to the production of more variable offspring. When plants have two genetically different parents, heterozygosity levels will be higher than if it has been inbred or backcrossed repeatedly.
The ratio of reads mapped to Y-contigs to reads mapped to the whole Cannabis genome (Y-ratios) has been demonstrated to be strongly correlated with plant sex typing. This plot shows the distribution of Y-ratios for all samples in our database which were sequenced with the same method (panel or WGS) as this sample and where this sample falls in the distribution.

This chart represents the Illumina sequence coverage over the Bt/Bd allele. These are the three regions in the cannabis genome that impact THCA, CBDA, CBGA production. Coverage over the Active CBDAS gene is highly correlated with Type II and Type III plants as described by Etienne de Meijer. Coverage over the THCA gene is highly correlated with Type I and Type II plants but is anti-correlated with Type III plants. Type I plants require coverage over the inactive CBDA loci and no coverage over the Active CBDA gene. Lack of coverage over the Active CBDA and Active THCA allele are presumed to be Type IV plants (CBGA dominant). While deletions of entire THCAS and CBDAS genes are the most common Bt:Bd alleles observed, it is possible to have plants with these genes where functional expression of the enzyme is disrupted by deactivating point mutations (Kojoma et al. 2006).



This chart represents the Illumina sequence coverage over the CBCA synthase gene.

Variants (THCAS, CBDAS, and CBCAS)
Variants (Select Genes of Interest)
PKSG-2a | c.995C>T | p.Ser332Phe | missense variant | moderate | contig700 | 1944395 | G/A | |
PKSG-2a | c.241G>A | p.Val81Met | missense variant | moderate | contig700 | 1945149 | C/T |
|
PKSG-2a | c.240T>G | p.Asp80Glu | missense variant | moderate | contig700 | 1945150 | A/C |
|
PKSG-2a | c.230T>C | p.Val77Ala | missense variant | moderate | contig700 | 1945160 | A/G |
|
PKSG-2a | c.224A>G | p.Lys75Arg | missense variant | moderate | contig700 | 1945166 | T/C | |
PKSG-2a | c.188T>G | p.Ile63Ser | missense variant | moderate | contig700 | 1945202 | A/C |
|
PKSG-2a | c.188T>A | p.Ile63Asn | missense variant | moderate | contig700 | 1945202 | A/T |
|
PKSG-2a | c.67T>A | p.Phe23Ile | missense variant | moderate | contig700 | 1945567 | A/T | |
PKSG-2a | c.31A>T | p.Thr11Ser | missense variant | moderate | contig700 | 1945603 | T/A | |
PKSG-2b | c.1152T>A | p.Asn384Lys | missense variant | moderate | contig700 | 1950486 | A/T | |
PKSG-2b | c.1132C>G | p.Leu378Val | missense variant | moderate | contig700 | 1950506 | G/C |
|
PKSG-2b | c.1117A>G | p.Ile373Val | missense variant | moderate | contig700 | 1950521 | T/C | |
PKSG-2b | c.948T>G | p.Asp316Glu | missense variant | moderate | contig700 | 1950690 | A/C |
|
PKSG-2b | c.945T>G | p.Ser315Arg | missense variant | moderate | contig700 | 1950693 | A/C |
|
PKSG-2b | c.944G>A | p.Ser315Asn | missense variant | moderate | contig700 | 1950694 | C/T |
|
PKSG-2b | c.934C>G | p.His312Asp | missense variant | moderate | contig700 | 1950704 | G/C |
|
PKSG-2b | c.774G>A | p.Met258Ile | missense variant | moderate | contig700 | 1950864 | C/T | |
PKSG-2b | c.241G>A | p.Val81Met | missense variant | moderate | contig700 | 1951397 | C/T |
|
PKSG-2b | c.240T>G | p.Asp80Glu | missense variant | moderate | contig700 | 1951398 | A/C |
|
PKSG-2b | c.230T>C | p.Val77Ala | missense variant | moderate | contig700 | 1951408 | A/G | |
PKSG-2b | c.224A>G | p.Lys75Arg | missense variant | moderate | contig700 | 1951414 | T/C | |
PKSG-2b | c.31A>T | p.Thr11Ser | missense variant | moderate | contig700 | 1951851 | T/A | |
PKSG-2b | c.-2_1dupATA | start lost & conservative inframe insertion | high | contig700 | 1951880 | A/ATAT |
|
|
PKSG-4b |
c.535_545del |
p.Ile179fs | frameshift variant | high | contig700 | 2721127 |
CCCCACTCCAAT |
|
PKSG-4b | c.523C>T | p.His175Tyr | missense variant | moderate | contig700 | 2721150 | G/A | |
PKSG-4b | c.489delT | p.Phe163fs | frameshift variant | high | contig700 | 2721183 | CA/C | |
PKSG-4b |
c.353_354ins |
p.Gly119fs | frameshift variant | high | contig700 | 2721319 | T/TGG |
|
DXR-2 | c.1319T>C | p.Ile440Thr | missense variant | moderate | contig380 | 285250 | A/G |
|
DXR-2 | c.431C>G | p.Ala144Gly | missense variant | moderate | contig380 | 287760 | G/C | |
FAD2-2 | c.161T>A | p.Leu54His | missense variant | moderate | contig83 | 1803208 | A/T |
|
aPT4 | c.16G>A | p.Val6Ile | missense variant | moderate | contig121 | 2828672 | G/A |
|
aPT4 | c.35A>C | p.Gln12Pro | missense variant | moderate | contig121 | 2828691 | A/C |
|
aPT4 | c.97T>C | p.Tyr33His | missense variant | moderate | contig121 | 2828753 | T/C |
|
aPT4 | c.153A>C | p.Lys51Asn | missense variant | moderate | contig121 | 2828809 | A/C |
|
aPT4 |
c.235_236del |
p.Val79fs | frameshift variant | high | contig121 | 2829030 | ATG/A |
|
aPT4 | c.238delT | p.Ser80fs | frameshift variant | high | contig121 | 2829034 | AT/A |
|
aPT4 | c.302A>G | p.Asn101Ser | missense variant | moderate | contig121 | 2829099 | A/G |
|
aPT4 | c.1111C>A | p.Leu371Ile | missense variant | moderate | contig121 | 2833296 | C/A |
|
aPT4 | c.1168T>C | p.Tyr390His | missense variant | moderate | contig121 | 2833503 | T/C |
|
aPT1 | c.406A>G | p.Ile136Val | missense variant | moderate | contig121 | 2839605 | A/G | |
aPT1 | c.629C>T | p.Thr210Ile | missense variant | moderate | contig121 | 2840237 | C/T | |
HDS-2 |
c.82_93delGT |
p.Val28_Thr3 |
conservative inframe deletion | moderate | contig95 | 1989748 |
CGTAACCGGAAC |
|
HDS-2 | c.127T>G | p.Ser43Ala | missense variant | moderate | contig95 | 1989794 | T/G |
|
HDS-1 |
c.-108+1_-10 |
splice donor variant & intron variant | high | contig1891 | 889975 | A/AC |
|
Nearest genetic relatives (All Samples)
- 0.193 Arcata Trainwreck (RSP11176)
- 0.227 Pai 60w (RSP11743)
- 0.228 Serious Happiness (RSP10763)
- 0.231 JABBA S STASH (RSP11348)
- 0.233 RKM-2018-019 (RSP11111)
- 0.234 North Traveler (RSP11163)
- 0.234 Rest (RSP11377)
- 0.236 Electra (RSP11366)
- 0.237 Lift (RSP11378)
- 0.237 Wedding Cake x MAC (RSP11464)
- 0.239 C Temple (RSP11643)
- 0.246 Doug s Varin (RSP11243)
- 0.247 Banana Kush (RSP11739)
- 0.249 Cherry Gar-See-Ya (RSP11642)
- 0.249 Black 84 (RSP11188)
- 0.249 Harlox (RSP11178)
- 0.250 Blueberry Cheesecake (RSP10684)
- 0.250 Domnesia (RSP11184)
- 0.251 Tahoe OG (RSP11189)
- 0.252 MBD (RSP11368)
Nearest genetic relatives (Base Tree)
- 0.235 RKM-2018-019 (RSP11111)
- 0.250 Kimbo Slice (RSP10997)
- 0.254 RKM-2018-004 (RSP11096)
- 0.255 RKM-2018-034 (RSP11126)
- 0.255 Blueberry Cheesecake (RSP10684)
- 0.255 Blueberry Cheesecake (RSP10680)
- 0.259 RKM-2018-033 (RSP11125)
- 0.265 Queen Jesus (RSP10105)
- 0.265 Tisza (RSP10659)
- 0.270 The Gift (RSP10988)
- 0.270 Hermaphrodite ResearchSample2 (RSP11050)
- 0.272 Liberty Haze (RSP11000)
- 0.277 RKM-2018-026 (RSP11118)
- 0.279 RKM-2018-032 (RSP11124)
- 0.279 RKM-2018-029 (RSP11121)
- 0.279 RKM-2018-009 (RSP11100)
- 0.281 Recon (RSP10755)
- 0.281 Sour Raspberry (RSP10551)
- 0.284 Golden Goat 2 (RSP10991)
- 0.287 Pie Hoe (RSP11073)
Most genetically distant strains (All Samples)
- 0.453 Cherry Blossom (RSP11328)
- 0.446 Cherry Blossom (RSP11323)
- 0.427 Cherry Blossom (RSP11309)
- 0.420 Cherry Blossom (RSP11301)
- 0.419 Unknown--Cherry Wine---001- (RSP11268)
- 0.416 Cherry Blossom (RSP11298)
- 0.415 JL yellow (RSP11075)
- 0.414 Unknown--Cherry Wine---003- (RSP11270)
- 0.407 Cherry Blossom (RSP11318)
- 0.403 JL 3rd Gen Mother (RSP11214)
- 0.403 Tanao Sri -46- (RSP11486)
- 0.398 Unknown--Cherry Wine---002- (RSP11269)
- 0.398 Ringo s Gift -Katie s Cut- (RSP11624)
- 0.396 BagSeed (RSP12627)
- 0.396 AVIDEKEL USA (RSP11169)
- 0.386 AVIDEKEL 2 0 (RSP11174)
- 0.386 Cherry Blossom (RSP11300)
- 0.385 Wife (RSP11148)
- 0.384 Avidekel 05MAY2017 (RSP10938)
- 0.384 JL 3rd Gen Father (RSP11196)
Most genetically distant strains (Base Tree)
- 0.407 JL yellow (RSP11075)
- 0.370 Cbot-2019-005 (RSP11133)
- 0.359 Cbot-2019-001 (RSP11129)
- 0.353 Cherry (RSP11143)
- 0.352 RKM-2018-006 (RSP11097)
- 0.350 Cherry (RSP11142)
- 0.347 RKM-2018-027 (RSP11119)
- 0.341 RKM-2018-028 (RSP11120)
- 0.339 Kush Hemp E1 (RSP11128)
- 0.338 RKM-2018-023 (RSP11115)
- 0.333 Italian Kiss (RSP11034)
- 0.333 Monoica (RSP10241)
- 0.331 RKM-2018-002 (RSP11093)
- 0.329 Feral (RSP10890)
- 0.324 Blue Dream (RSP11033)
- 0.323 RKM-2018-003 (RSP11094)
- 0.319 RKM-2018-022 (RSP11114)
- 0.318 RKM-2018-018 (RSP11110)
- 0.317 UP Sunrise (RSP10989)
- 0.316 Skunk#18 (RSP11038)
Nearest genetic relative in Phylos dataset
- Overlapping SNPs:
- 88
- Concordance:
- 53
Nearest genetic relative in Lynch dataset
- Overlapping SNPs:
- 8
- Concordance:
- 8
Blockchain Registration Information
- SHASUM Hash
-
546885c9919e1996
5c0627691b1b2d5e ef464d575fe1ae6d a8d16320368647ec