Jolly Rancher
RSP 11639
Grower: Happy Valley
Summary
Jolly Rancher (RSP11639/Happy Valley) is a genetic Type I plant and its genetics appear uncommon. The sample's closest relative in the database is Electra (RSP11366/TOKN CBD) and it is a potential sibling. The heterozygosity rate is 1.11% which is average (54.1 percentile).
General Information
- Accession Date
- September 17, 2020
- Reported Plant Sex
- Female
- Report Type
- StrainSEEK v2 3.2Mb
The strain rarity visualization shows how distant the strain is from the other cultivars in the Kannapedia database. The y-axis represents genetic distance, getting farther as you go up. The width of the visualization at any position along the y-axis shows how many strains there are in the database at that genetic distance. So, a common strain will have a more bottom-heavy shape, while uncommon and rare cultivars will have a visualization that is generally shifted towards the top.
Chemical Information
Cannabinoid and terpenoid information provided by the grower.
Cannabinoids
No information provided.
Terpenoids
No information provided.
Genetic Information
- Plant Type
- Type I
File Downloads
The bell curve in the heterozygosity visualization shows the distribution of heterozygosity levels for cannabis cultivars in the Kannapedia database. The green line shows where this particular strain fits within the distribution. Heterozygosity is associated with heterosis (aka hybrid vigor) but also leads to the production of more variable offspring. When plants have two genetically different parents, heterozygosity levels will be higher than if it has been inbred or backcrossed repeatedly.
The ratio of reads mapped to Y-contigs to reads mapped to the whole Cannabis genome (Y-ratios) has been demonstrated to be strongly correlated with plant sex typing. This plot shows the distribution of Y-ratios for all samples in our database which were sequenced with the same method (panel or WGS) as this sample and where this sample falls in the distribution.

This chart represents the Illumina sequence coverage over the Bt/Bd allele. These are the three regions in the cannabis genome that impact THCA, CBDA, CBGA production. Coverage over the Active CBDAS gene is highly correlated with Type II and Type III plants as described by Etienne de Meijer. Coverage over the THCA gene is highly correlated with Type I and Type II plants but is anti-correlated with Type III plants. Type I plants require coverage over the inactive CBDA loci and no coverage over the Active CBDA gene. Lack of coverage over the Active CBDA and Active THCA allele are presumed to be Type IV plants (CBGA dominant). While deletions of entire THCAS and CBDAS genes are the most common Bt:Bd alleles observed, it is possible to have plants with these genes where functional expression of the enzyme is disrupted by deactivating point mutations (Kojoma et al. 2006).



This chart represents the Illumina sequence coverage over the CBCA synthase gene.

Variants (THCAS, CBDAS, and CBCAS)
Variants (Select Genes of Interest)
PKSG-2a | c.67T>A | p.Phe23Ile | missense variant | moderate | contig700 | 1945567 | A/T | |
PKSG-2a | c.31A>T | p.Thr11Ser | missense variant | moderate | contig700 | 1945603 | T/A | |
PKSG-2b | c.1152T>A | p.Asn384Lys | missense variant | moderate | contig700 | 1950486 | A/T | |
PKSG-2b | c.1132C>G | p.Leu378Val | missense variant | moderate | contig700 | 1950506 | G/C |
|
PKSG-2b | c.1117A>G | p.Ile373Val | missense variant | moderate | contig700 | 1950521 | T/C | |
PKSG-2b | c.945T>G | p.Ser315Arg | missense variant | moderate | contig700 | 1950693 | A/C |
|
PKSG-2b | c.944G>A | p.Ser315Asn | missense variant | moderate | contig700 | 1950694 | C/T |
|
PKSG-2b | c.31A>T | p.Thr11Ser | missense variant | moderate | contig700 | 1951851 | T/A | |
PKSG-2b | c.-2_1dupATA | start lost & conservative inframe insertion | high | contig700 | 1951880 | A/ATAT |
|
|
PKSG-4b | c.489delT | p.Phe163fs | frameshift variant | high | contig700 | 2721183 | CA/C | |
aPT4 | c.775delT | p.Tyr259fs | frameshift variant | high | contig121 | 2831380 | AT/A |
|
aPT4 | c.1168T>C | p.Tyr390His | missense variant | moderate | contig121 | 2833503 | T/C |
|
aPT1 | c.406A>G | p.Ile136Val | missense variant | moderate | contig121 | 2839605 | A/G | |
aPT1 | c.629C>T | p.Thr210Ile | missense variant | moderate | contig121 | 2840237 | C/T | |
HDS-2 |
c.82_93delGT |
p.Val28_Thr3 |
conservative inframe deletion | moderate | contig95 | 1989748 |
CGTAACCGGAAC |
|
HDS-2 | c.127T>G | p.Ser43Ala | missense variant | moderate | contig95 | 1989794 | T/G |
|
Nearest genetic relatives (All Samples)
- 0.184 Electra (RSP11366)
- 0.190 UP Wendigo (RSP11261)
- 0.191 Lift (RSP11378)
- 0.192 Serious Happiness (RSP10763)
- 0.195 Joy (RSP11380)
- 0.198 Super Blue Dream (RSP11011)
- 0.198 UP Sunrise (RSP10989)
- 0.200 UnObtanium (RSP11611)
- 0.200 Blue Dream (RSP11017)
- 0.205 Doug s Varin (RSP11243)
- 0.206 Banana Daddy 1 Big (RSP11496)
- 0.208 Mother s Milk No 31 (RSP11623)
- 0.210 Whitey (RSP11363)
- 0.211 Blue Dream (RSP11009)
- 0.213 Blue Dream (RSP11004)
- 0.213 JL Cross 10 (RSP11511)
- 0.214 CPH (RSP11367)
- 0.215 Blue Dream (RSP11006)
- 0.216 Golden Goat 2 (RSP10991)
- 0.218 Lifter (RSP11365)
Nearest genetic relatives (Base Tree)
- 0.207 UP Sunrise (RSP10989)
- 0.217 Golden Goat 2 (RSP10991)
- 0.248 Blueberry Cheesecake (RSP10684)
- 0.252 Blue Dream (RSP11033)
- 0.265 RKM-2018-020 (RSP11112)
- 0.269 RKM-2018-027 (RSP11119)
- 0.269 RKM-2018-023 (RSP11115)
- 0.270 RKM-2018-005 (RSP11096)
- 0.273 RKM-2018-032 (RSP11124)
- 0.274 Durban Poison (RSP11014)
- 0.291 Liberty Haze (RSP11000)
- 0.297 Cbot-2019-006 (RSP11134)
- 0.297 Gold Cracker (RSP11048)
- 0.302 Skunk 18 (RSP11038)
- 0.302 RKM-2018-029 (RSP11121)
- 0.303 Hermaphrodite Research Sample1 (RSP11049)
- 0.307 Blueberry Cheesecake (RSP10680)
- 0.307 RKM-2018-018 (RSP11110)
- 0.308 Italian Kiss (RSP11034)
- 0.309 The Gift (RSP10988)
Most genetically distant strains (All Samples)
- 0.458 80E (RSP11213)
- 0.439 Ivory (RSP10668)
- 0.438 Northern Lights (RSP11501)
- 0.436 80E (RSP11212)
- 0.434 Cbot-2019-005 (RSP11133)
- 0.434 80E (RSP11211)
- 0.432 Squirrel Tail 81 (RSP11622)
- 0.428 Feral (RSP10892)
- 0.427 Feral (RSP11205)
- 0.427 Feral (RSP10891)
- 0.426 Tanao Sri-white 80 (RSP11621)
- 0.421 Tanao Sri 46 (RSP11486)
- 0.421 Carmagnola (RSP11202)
- 0.418 Tiger Tail 30 (RSP11484)
- 0.418 Kush Hemp E1 (RSP11128)
- 0.418 Unknown- Cherry Wine - 001 (RSP11268)
- 0.416 Santhica27 (RSP11046)
- 0.416 CS (RSP11208)
- 0.415 USO 31 (RSP10983)
- 0.414 Feral (RSP10890)
Most genetically distant strains (Base Tree)
- 0.438 Cbot-2019-005 (RSP11133)
- 0.437 Ivory (RSP10668)
- 0.427 Feral (RSP10890)
- 0.424 Kush Hemp E1 (RSP11128)
- 0.420 Monoica (RSP10241)
- 0.415 Fedora 17 (RSP10661)
- 0.411 Carmagnola (RSP11037)
- 0.404 Santhica27 (RSP11047)
- 0.399 Kyrgyz Gold (RSP11054)
- 0.393 JL yellow (RSP11075)
- 0.392 KYRG-11 (RSP11051)
- 0.390 Jiangji (RSP10653)
- 0.390 USO 31 (RSP10981)
- 0.387 Lovrin (RSP10658)
- 0.385 Futura 75 (RSP10664)
- 0.384 Cbot-2019-004 (RSP11132)
- 0.377 Carmagnola (RSP10979)
- 0.376 Tisza (RSP11044)
- 0.362 Tygra (RSP10667)
- 0.361 Cherry (RSP11142)
Nearest genetic relative in Phylos dataset
- Overlapping SNPs:
- 85
- Concordance:
- 54
Nearest genetic relative in Lynch dataset
- Overlapping SNPs:
- 2
- Concordance:
- 2
Blockchain Registration Information
- Transaction ID
-
975da35d3858b4b7
edc8369b1b391896 08c95a5b714e1d7c 26b388afd251270d - Stamping Certificate
- Download PDF (39.4 KB)
- SHASUM Hash
-
a8912fb3ee140cf0
a6d550efcefdf884 901c78c7c7ae54a4 6c1e51624152b98a