Advanced Strain Search

Peanut Butter Breath

RSP 11640

Grower: Happy Valley

Summary

Peanut Butter Breath (RSP11640/Happy Valley) is a genetic Type I plant and its genetics appear rare. The sample's closest relative in the database is Garlic (RSP11341/Happy Valley) and it is a potential sibling. The heterozygosity rate is 1.18% which is average (65.7 percentile).

General Information

Accession Date
September 17, 2020
Reported Plant Sex
Female
DNA Extracted From
Stem

The strain rarity visualization shows how distant the strain is from the other cultivars in the Kannapedia database. The y-axis represents genetic distance, getting farther as you go up. The width of the visualization at any position along the y-axis shows how many strains there are in the database at that genetic distance. So, a common strain will have a more bottom-heavy shape, while uncommon and rare cultivars will have a visualization that is generally shifted towards the top.

Rarity: Uncommon
Most Distant Most Similar

Chemical Information

Cannabinoid and terpenoid information provided by the grower.

Cannabinoids

No information provided.

Terpenoids

No information provided.

Genetic Information

Plant Type
Type I

File Downloads

The bell curve in the heterozygosity visualization shows the distribution of heterozygosity levels for cannabis cultivars in the Kannapedia database. The green line shows where this particular strain fits within the distribution. Heterozygosity is associated with heterosis (aka hybrid vigor) but also leads to the production of more variable offspring. When plants have two genetically different parents, heterozygosity levels will be higher than if it has been inbred or backcrossed repeatedly.

Heterozygosity: 1.18%
Least Heterozygous Most Heterozygous

The ratio of reads mapped to Y-contigs to reads mapped to the whole Cannabis genome (Y-ratios) has been demonstrated to be strongly correlated with plant sex typing. This plot shows the distribution of Y-ratios for all samples in our database which were sequenced with the same method (panel or WGS) as this sample and where this sample falls in the distribution.

Y-Ratio Distribution: 0.0462
male female RSP11640

This chart represents the Illumina sequence coverage over the Bt/Bd allele. These are the three regions in the cannabis genome that impact THCA, CBDA, CBGA production. Coverage over the Active CBDAS gene is highly correlated with Type II and Type III plants as described by Etienne de Meijer. Coverage over the THCA gene is highly correlated with Type I and Type II plants but is anti-correlated with Type III plants. Type I plants require coverage over the inactive CBDA loci and no coverage over the Active CBDA gene. Lack of coverage over the Active CBDA and Active THCA allele are presumed to be Type IV plants (CBGA dominant). While deletions of entire THCAS and CBDAS genes are the most common Bt:Bd alleles observed, it is possible to have plants with these genes where functional expression of the enzyme is disrupted by deactivating point mutations (Kojoma et al. 2006).

Bt/Bd Allele Coverage

This chart represents the Illumina sequence coverage over the CBCA synthase gene.

CBCAS Coverage

Variants (THCAS, CBDAS, and CBCAS)

Gene HGVS.c HGVS.p Annotation Annotation Impact Contig Contig Pos Ref/Alt Var Freq
THCAS c.998C>G p.Pro333Arg missense variant moderate contig741 4416830

IGV: Start, Jump

G/C
NGS:
0.182
C90:
0.000

Variants (Select Genes of Interest)
PKSG-2a

UniProt

c.67T>A p.Phe23Ile missense variant moderate contig700 1945567

IGV: Start, Jump

A/T
NGS:
0.825
C90:
0.904
PKSG-2a

UniProt

c.31A>T p.Thr11Ser missense variant moderate contig700 1945603

IGV: Start, Jump

T/A
NGS:
0.763
C90:
0.876
PKSG-2b

UniProt

c.1152T>A p.Asn384Lys missense variant moderate contig700 1950486

IGV: Start, Jump

A/T
NGS:
0.715
C90:
0.895
PKSG-2b

UniProt

c.1132C>G p.Leu378Val missense variant moderate contig700 1950506

IGV: Start, Jump

G/C
NGS:
0.717
C90:
0.000
PKSG-2b

UniProt

c.1117A>G p.Ile373Val missense variant moderate contig700 1950521

IGV: Start, Jump

T/C
NGS:
0.807
C90:
0.981
PKSG-2b

UniProt

c.948T>G p.Asp316Glu missense variant moderate contig700 1950690

IGV: Start, Jump

A/C
NGS:
0.456
C90:
0.000
PKSG-2b

UniProt

c.945T>G p.Ser315Arg missense variant moderate contig700 1950693

IGV: Start, Jump

A/C
NGS:
0.454
C90:
0.000
PKSG-2b

UniProt

c.944G>A p.Ser315Asn missense variant moderate contig700 1950694

IGV: Start, Jump

C/T
NGS:
0.445
C90:
0.000
PKSG-2b

UniProt

c.934C>G p.His312Asp missense variant moderate contig700 1950704

IGV: Start, Jump

G/C
NGS:
0.410
C90:
0.000
PKSG-2b

UniProt

c.31A>T p.Thr11Ser missense variant moderate contig700 1951851

IGV: Start, Jump

T/A
NGS:
0.844
C90:
0.880
DXR-2

UniProt

c.431C>G p.Ala144Gly missense variant moderate contig380 287760

IGV: Start, Jump

G/C
NGS:
0.182
C90:
0.550
HDS-2

UniProt

c.82_93delGTAACCGGAACT p.Val28_Thr31del conservative inframe deletion moderate contig95 1989748

IGV: Start, Jump

CGTAACCGGAACT/C
NGS:
0.805
C90:
0.000
HDS-2

UniProt

c.127T>G p.Ser43Ala missense variant moderate contig95 1989794

IGV: Start, Jump

T/G
NGS:
0.721
C90:
0.000

Nearest genetic relatives (All Samples)

0 0.058 0.117 0.175 0.233
clone distance sibling distance more distant
  1. 0.149 Garlic (RSP11341)
  2. 0.179 Gorilla Cookies (RSP11231)
  3. 0.188 GMO (RSP12091)
  4. 0.196 MENDO BREATH (RSP11242)
  5. 0.199 GMO x Zkittlez #43 (RSP11976)
  6. 0.203 Mendo Breath (RSP11747)
  7. 0.209 Star Dawg (RSP11352)
  8. 0.210 Fatso (RSP11741)
  9. 0.216 Rugburn OG (RSP11353)
  10. 0.216 Hermaphrodite ResearchSample2 (RSP11050)
  11. 0.217 Mother s Milk No 31 (RSP11623)
  12. 0.218 NSPM1 (RSP11362)
  13. 0.219 Pure Power Plant (RSP11265)
  14. 0.220 NSPM x NSPM (RSP11487)
  15. 0.221 RKM-2018-026 (RSP11118)
  16. 0.223 Cherry Lime Runtz (RSP12486)
  17. 0.226 Hermaphrodite ResearchSample2 (RSP11043)
  18. 0.230 Right Mark (RSP11628)
  19. 0.230 Grape Stomper (RSP11180)
  20. 0.233 Chem 91 (RSP11185)

Most genetically distant strains (All Samples)

0 0.125 0.250 0.375 0.500
clone distance sibling distance more distant
  1. 0.483 Cherry Blossom (RSP11318)
  2. 0.469 JL yellow (RSP11075)
  3. 0.460 JL 3rd Gen Mother (RSP11214)
  4. 0.454 Cherry Blossom (RSP11323)
  5. 0.453 Tanao Sri -46- (RSP11486)
  6. 0.446 Cherry Blossom (RSP11325)
  7. 0.444 Northern Skunk (RSP11456)
  8. 0.442 Brunswick High (RSP11164)
  9. 0.440 Cherry Blossom (RSP11328)
  10. 0.439 Cherry Blossom (RSP11274)
  11. 0.438 Cherry Blossom (RSP11306)
  12. 0.437 JL 4th Gen 5 (RSP11199)
  13. 0.433 Unknown--Cherry Wine---001- (RSP11268)
  14. 0.433 Gorilla Glue (RSP11493)
  15. 0.432 Cherry Blossom (RSP11301)
  16. 0.431 JL x NSPM1 4 (RSP11482)
  17. 0.427 North Traveler (RSP11168)
  18. 0.427 JL X NSPM1 12 (RSP11472)
  19. 0.426 Avidekel 05MAY2017 (RSP10938)
  20. 0.426 JL 3rd Gen Mother (RSP11197)

Nearest genetic relative in Phylos dataset

Phylos Strain SRR8349028
Overlapping SNPs:
85
Concordance:
54

Nearest genetic relative in Lynch dataset

Lynch Strain SRR3495242
Overlapping SNPs:
3
Concordance:
3

Blockchain Registration Information

Transaction ID
9bbc3c3e570c86d0adefb02aabf567c6aa00842cc5ed4c49f9a46abcc3c7d6a7
Stamping Certificate
Download PDF (39.6 KB)
SHASUM Hash
108229a1730cb1472e8583c90b358808cb7858c9016144631312481dd4aadc1a
QR code for RSP11640

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