Super Lemon Haze
RSP 11641
Grower: Happy Valley
Summary
Super Lemon Haze (RSP11641/Happy Valley) is a genetic Type I plant and its genetics appear uncommon. The sample's closest relative in the database is Blue Dream (RSP11004/JGB Enterprises) and it is a potential sibling. The heterozygosity rate is 1.03% which is average (39.1 percentile).
General Information

- Accession Date
- September 17, 2020
- Reported Plant Sex
- Female
- Report Type
- StrainSEEK v2 3.2Mb
The strain rarity visualization shows how distant the strain is from the other cultivars in the Kannapedia database. The y-axis represents genetic distance, getting farther as you go up. The width of the visualization at any position along the y-axis shows how many strains there are in the database at that genetic distance. So, a common strain will have a more bottom-heavy shape, while uncommon and rare cultivars will have a visualization that is generally shifted towards the top.
Chemical Information
Cannabinoid and terpenoid information provided by the grower.
Cannabinoids
No information provided.
Terpenoids
No information provided.
Genetic Information
- Plant Type
- Type I
File Downloads
The bell curve in the heterozygosity visualization shows the distribution of heterozygosity levels for cannabis cultivars in the Kannapedia database. The green line shows where this particular strain fits within the distribution. Heterozygosity is associated with heterosis (aka hybrid vigor) but also leads to the production of more variable offspring. When plants have two genetically different parents, heterozygosity levels will be higher than if it has been inbred or backcrossed repeatedly.
The ratio of reads mapped to Y-contigs to reads mapped to the whole Cannabis genome (Y-ratios) has been demonstrated to be strongly correlated with plant sex typing. This plot shows the distribution of Y-ratios for all samples in our database which were sequenced with the same method (panel or WGS) as this sample and where this sample falls in the distribution.

This chart represents the Illumina sequence coverage over the Bt/Bd allele. These are the three regions in the cannabis genome that impact THCA, CBDA, CBGA production. Coverage over the Active CBDAS gene is highly correlated with Type II and Type III plants as described by Etienne de Meijer. Coverage over the THCA gene is highly correlated with Type I and Type II plants but is anti-correlated with Type III plants. Type I plants require coverage over the inactive CBDA loci and no coverage over the Active CBDA gene. Lack of coverage over the Active CBDA and Active THCA allele are presumed to be Type IV plants (CBGA dominant). While deletions of entire THCAS and CBDAS genes are the most common Bt:Bd alleles observed, it is possible to have plants with these genes where functional expression of the enzyme is disrupted by deactivating point mutations (Kojoma et al. 2006).



This chart represents the Illumina sequence coverage over the CBCA synthase gene.

Variants (THCAS, CBDAS, and CBCAS)
Variants (Select Genes of Interest)
PKSG-2a | c.67T>A | p.Phe23Ile | missense variant | moderate | contig700 | 1945567 | A/T | |
PKSG-2a | c.31A>T | p.Thr11Ser | missense variant | moderate | contig700 | 1945603 | T/A | |
PKSG-2b | c.1152T>A | p.Asn384Lys | missense variant | moderate | contig700 | 1950486 | A/T | |
PKSG-2b | c.1132C>G | p.Leu378Val | missense variant | moderate | contig700 | 1950506 | G/C |
|
PKSG-2b | c.1117A>G | p.Ile373Val | missense variant | moderate | contig700 | 1950521 | T/C | |
PKSG-2b | c.948T>G | p.Asp316Glu | missense variant | moderate | contig700 | 1950690 | A/C |
|
PKSG-2b | c.945T>G | p.Ser315Arg | missense variant | moderate | contig700 | 1950693 | A/C |
|
PKSG-2b | c.944G>A | p.Ser315Asn | missense variant | moderate | contig700 | 1950694 | C/T |
|
PKSG-2b | c.934C>G | p.His312Asp | missense variant | moderate | contig700 | 1950704 | G/C |
|
PKSG-2b | c.31A>T | p.Thr11Ser | missense variant | moderate | contig700 | 1951851 | T/A | |
PKSG-2b | c.31A>C | p.Thr11Pro | missense variant | moderate | contig700 | 1951851 | T/G |
|
PKSG-2b | c.-2_1dupATA | start lost & conservative inframe insertion | high | contig700 | 1951880 | A/ATAT |
|
|
PKSG-4b | c.527G>T | p.Trp176Leu | missense variant | moderate | contig700 | 2721146 | C/A |
|
PKSG-4b | c.526T>C | p.Trp176Arg | missense variant | moderate | contig700 | 2721147 | A/G |
|
PKSG-4b | c.496A>G | p.Lys166Glu | missense variant | moderate | contig700 | 2721177 | T/C | |
PKSG-4b | c.489delT | p.Phe163fs | frameshift variant | high | contig700 | 2721183 | CA/C | |
PKSG-4b | c.485A>G | p.Lys162Arg | missense variant | moderate | contig700 | 2721188 | T/C | |
PKSG-4b | c.431T>G | p.Val144Gly | missense variant | moderate | contig700 | 2721242 | A/C | |
PKSG-4b | c.419A>G | p.Asp140Gly | missense variant | moderate | contig700 | 2721254 | T/C | |
PKSG-4b |
c.352_355del |
p.Thr118fs | frameshift variant | high | contig700 | 2721317 | CCTGT/C |
|
PKSG-4b | c.323A>G | p.Glu108Gly | missense variant | moderate | contig700 | 2721350 | T/C |
|
DXR-2 | c.1319T>C | p.Ile440Thr | missense variant | moderate | contig380 | 285250 | A/G |
|
DXR-2 | c.431C>G | p.Ala144Gly | missense variant | moderate | contig380 | 287760 | G/C | |
FAD2-2 | c.172G>T | p.Asp58Tyr | missense variant | moderate | contig83 | 1803197 | C/A |
|
FAD2-2 | c.161T>A | p.Leu54His | missense variant | moderate | contig83 | 1803208 | A/T |
|
aPT4 | c.97T>C | p.Tyr33His | missense variant | moderate | contig121 | 2828753 | T/C |
|
aPT4 | c.153A>C | p.Lys51Asn | missense variant | moderate | contig121 | 2828809 | A/C |
|
aPT4 | c.775delT | p.Tyr259fs | frameshift variant | high | contig121 | 2831380 | AT/A |
|
aPT4 | c.1168T>C | p.Tyr390His | missense variant | moderate | contig121 | 2833503 | T/C |
|
aPT1 | c.406A>G | p.Ile136Val | missense variant | moderate | contig121 | 2839605 | A/G | |
aPT1 | c.629C>T | p.Thr210Ile | missense variant | moderate | contig121 | 2840237 | C/T | |
HDS-2 |
c.82_93delGT |
p.Val28_Thr3 |
conservative inframe deletion | moderate | contig95 | 1989748 |
CGTAACCGGAAC |
|
HDS-2 | c.127T>G | p.Ser43Ala | missense variant | moderate | contig95 | 1989794 | T/G |
|
HDS-1 |
c.-108+1_-10 |
splice donor variant & intron variant | high | contig1891 | 889975 | A/AC |
|
Nearest genetic relatives (All Samples)
- 0.146 Blue Dream (RSP11004)
- 0.152 BLACK JACK (RSP11346)
- 0.157 Black Jack (RSP10603)
- 0.157 RKM-2018-025 (RSP11117)
- 0.158 Super Blue Dream (RSP11011)
- 0.160 RKM-2018-016 (RSP11108)
- 0.164 Blue Dream (RSP11009)
- 0.165 Blue Dream (RSP11012)
- 0.166 Blue Dream (RSP11006)
- 0.168 Blue Dream (RSP11010)
- 0.170 UP Sunrise (RSP10989)
- 0.171 Blue Dream (RSP11008)
- 0.172 Snoops Dream (RSP11031)
- 0.174 Blue Dream (RSP11007)
- 0.175 Blue Dream (RSP11017)
- 0.179 Snoops Dream (RSP11003)
- 0.180 RKM-2018-027 (RSP11119)
- 0.181 Cheese (RSP10460)
- 0.183 Blue Dream (RSP11033)
- 0.185 Blue Dream (RSP11032)
Nearest genetic relatives (Base Tree)
- 0.183 UP Sunrise (RSP10989)
- 0.189 Blue Dream (RSP11033)
- 0.197 RKM-2018-027 (RSP11119)
- 0.219 Gold Cracker (RSP11048)
- 0.222 Durban Poison (RSP11014)
- 0.248 Golden Goat 2 (RSP10991)
- 0.253 Hermaphrodite Research Sample1 (RSP11049)
- 0.254 Blueberry Cheesecake (RSP10684)
- 0.258 Italian Kiss (RSP11034)
- 0.259 RKM-2018-020 (RSP11112)
- 0.265 RKM-2018-003 (RSP11094)
- 0.266 Liberty Haze (RSP11000)
- 0.267 RKM-2018-032 (RSP11124)
- 0.268 RKM-2018-009 (RSP11100)
- 0.276 RKM-2018-023 (RSP11115)
- 0.283 CST (RSP11002)
- 0.288 RKM-2018-018 (RSP11110)
- 0.292 RKM-2018-006 (RSP11097)
- 0.293 RKM-2018-033 (RSP11125)
- 0.295 Recon (RSP10755)
Most genetically distant strains (All Samples)
- 0.441 Cherry Blossom (RSP11328)
- 0.432 Cherry Blossom (RSP11298)
- 0.431 Cherry Blossom (RSP11323)
- 0.424 Cherry Blossom (RSP11311)
- 0.423 Unknown- Cherry Wine - 001 (RSP11268)
- 0.420 Carmaleonte (RSP11207)
- 0.417 80E (RSP11213)
- 0.415 Feral (RSP11205)
- 0.412 Feral (RSP11206)
- 0.408 R4 (RSP11617)
- 0.408 Cherry Blossom (RSP11318)
- 0.406 Unknown- Cherry Wine - 003 (RSP11270)
- 0.406 Cherry Blossom (RSP11312)
- 0.405 Cherry Blossom (RSP11334)
- 0.405 CS (RSP11208)
- 0.405 Cherry Blossom (RSP11317)
- 0.400 YMCM (RSP11416)
- 0.400 80E (RSP11212)
- 0.400 Cherry Blossom (RSP11309)
- 0.398 Feral (RSP10892)
Most genetically distant strains (Base Tree)
- 0.414 Feral (RSP10890)
- 0.398 Kush Hemp E1 (RSP11128)
- 0.391 Monoica (RSP10241)
- 0.390 Ivory (RSP10668)
- 0.388 Fedora 17 (RSP10661)
- 0.384 JL yellow (RSP11075)
- 0.384 Santhica27 (RSP11047)
- 0.381 Black Beauty (RSP11035)
- 0.380 RKM-2018-022 (RSP11114)
- 0.375 Carmagnola (RSP11037)
- 0.375 Tisza (RSP11044)
- 0.373 Kyrgyz Gold (RSP11054)
- 0.372 Futura 75 (RSP10664)
- 0.371 Jiangji (RSP10653)
- 0.369 Cherry (RSP11143)
- 0.363 Carmagnola (RSP10979)
- 0.359 KYRG-11 (RSP11051)
- 0.358 RKM-2018-026 (RSP11118)
- 0.357 Skywalker OG (RSP10837)
- 0.357 Lovrin (RSP10658)
Nearest genetic relative in Phylos dataset
- Overlapping SNPs:
- 66
- Concordance:
- 45
Nearest genetic relative in Lynch dataset
- Overlapping SNPs:
- 2
- Concordance:
- 2
Blockchain Registration Information
- Transaction ID
-
e4e93b227a0f1b55
ea1638a0cd2f3330 757c0dcc447137c0 cb97a960ca00b310 - Stamping Certificate
- Download PDF (39.4 KB)
- SHASUM Hash
-
88be76f397278866
a55972d33daa22f3 39e752a06f5aeb22 e7cf195bf8b3389f