Dog Patch
RSP 11725
Grower: Happy Valley Ventures
Summary
Dog Patch (RSP11725/Happy Valley Ventures) is a genetic Type I plant and its genetics appear rare. The sample's closest relative in the database is Super Sour Diesel (RSP11191/Salmon Creek, CA) and it is a potential sibling. The heterozygosity rate is 0.94% which is average (34.3 percentile).
General Information
- Accession Date
- December 9, 2020
- Reported Plant Sex
- Female
- Report Type
- StrainSEEK v2 3.2Mb
The strain rarity visualization shows how distant the strain is from the other cultivars in the Kannapedia database. The y-axis represents genetic distance, getting farther as you go up. The width of the visualization at any position along the y-axis shows how many strains there are in the database at that genetic distance. So, a common strain will have a more bottom-heavy shape, while uncommon and rare cultivars will have a visualization that is generally shifted towards the top.
Chemical Information
Cannabinoid and terpenoid information provided by the grower.
Cannabinoids
No information provided.
Terpenoids
No information provided.
Genetic Information
- Plant Type
- Type I
File Downloads
The bell curve in the heterozygosity visualization shows the distribution of heterozygosity levels for cannabis cultivars in the Kannapedia database. The green line shows where this particular strain fits within the distribution. Heterozygosity is associated with heterosis (aka hybrid vigor) but also leads to the production of more variable offspring. When plants have two genetically different parents, heterozygosity levels will be higher than if it has been inbred or backcrossed repeatedly.
The ratio of reads mapped to Y-contigs to reads mapped to the whole Cannabis genome (Y-ratios) has been demonstrated to be strongly correlated with plant sex typing. This plot shows the distribution of Y-ratios for all samples in our database which were sequenced with the same method (panel or WGS) as this sample and where this sample falls in the distribution.

This chart represents the Illumina sequence coverage over the Bt/Bd allele. These are the three regions in the cannabis genome that impact THCA, CBDA, CBGA production. Coverage over the Active CBDAS gene is highly correlated with Type II and Type III plants as described by Etienne de Meijer. Coverage over the THCA gene is highly correlated with Type I and Type II plants but is anti-correlated with Type III plants. Type I plants require coverage over the inactive CBDA loci and no coverage over the Active CBDA gene. Lack of coverage over the Active CBDA and Active THCA allele are presumed to be Type IV plants (CBGA dominant). While deletions of entire THCAS and CBDAS genes are the most common Bt:Bd alleles observed, it is possible to have plants with these genes where functional expression of the enzyme is disrupted by deactivating point mutations (Kojoma et al. 2006).



This chart represents the Illumina sequence coverage over the CBCA synthase gene.

Variants (THCAS, CBDAS, and CBCAS)
No variants to report
Variants (Select Genes of Interest)
PKSG-4a | c.37C>G | p.Gln13Glu | missense variant | moderate | contig700 | 1936734 | C/G |
|
PKSG-4a | c.617A>G | p.Tyr206Cys | missense variant | moderate | contig700 | 1938028 | A/G |
|
PKSG-4a |
c.626_628del |
p.Asn209del | disruptive inframe deletion | moderate | contig700 | 1938032 | CAAT/C |
|
PKSG-4a |
c.1191_1193d |
p.Tyr398del | disruptive inframe deletion | moderate | contig700 | 1938600 | AATT/A |
|
PKSG-2a | c.1117A>G | p.Ile373Val | missense variant | moderate | contig700 | 1944273 | T/C | |
PKSG-2a | c.67T>A | p.Phe23Ile | missense variant | moderate | contig700 | 1945567 | A/T | |
PKSG-2a | c.31A>T | p.Thr11Ser | missense variant | moderate | contig700 | 1945603 | T/A | |
PKSG-2b | c.1117A>G | p.Ile373Val | missense variant | moderate | contig700 | 1950521 | T/C | |
PKSG-2b | c.995C>T | p.Ser332Phe | missense variant | moderate | contig700 | 1950643 | G/A |
|
PKSG-4b | c.496A>G | p.Lys166Glu | missense variant | moderate | contig700 | 2721177 | T/C | |
PKSG-4b | c.489delT | p.Phe163fs | frameshift variant | high | contig700 | 2721183 | CA/C | |
PKSG-4b | c.485A>G | p.Lys162Arg | missense variant | moderate | contig700 | 2721188 | T/C | |
PKSG-4b | c.431T>G | p.Val144Gly | missense variant | moderate | contig700 | 2721242 | A/C | |
PKSG-4b | c.419A>G | p.Asp140Gly | missense variant | moderate | contig700 | 2721254 | T/C | |
PKSG-4b |
c.352_355del |
p.Thr118fs | frameshift variant | high | contig700 | 2721317 | CCTGT/C |
|
PKSG-4b | c.323A>G | p.Glu108Gly | missense variant | moderate | contig700 | 2721350 | T/C |
|
DXR-2 | c.1319T>C | p.Ile440Thr | missense variant | moderate | contig380 | 285250 | A/G |
|
DXR-2 | c.431C>G | p.Ala144Gly | missense variant | moderate | contig380 | 287760 | G/C | |
FAD2-2 | c.172G>T | p.Asp58Tyr | missense variant | moderate | contig83 | 1803197 | C/A |
|
FAD2-2 | c.161T>A | p.Leu54His | missense variant | moderate | contig83 | 1803208 | A/T |
|
aPT4 | c.216A>T | p.Lys72Asn | missense variant | moderate | contig121 | 2828872 | A/T |
|
aPT1 | c.406A>G | p.Ile136Val | missense variant | moderate | contig121 | 2839605 | A/G | |
HDS-2 |
c.82_93delGT |
p.Val28_Thr3 |
conservative inframe deletion | moderate | contig95 | 1989748 |
CGTAACCGGAAC |
|
HDS-2 | c.127T>G | p.Ser43Ala | missense variant | moderate | contig95 | 1989794 | T/G |
|
HDS-1 | c.1378G>A | p.Val460Ile | missense variant | moderate | contig1891 | 886370 | C/T |
|
HDS-1 |
c.-108+1_-10 |
splice donor variant & intron variant | high | contig1891 | 889975 | A/AC |
|
Nearest genetic relatives (All Samples)
- 0.121 Super Sour Diesel (RSP11191)
- 0.155 Sour D (RSP11343)
- 0.162 East Coast Sour Diesel (RSP10243)
- 0.163 New York City Deisel (RSP11225)
- 0.187 Star Dawg (RSP11352)
- 0.192 RKM-2018-002 (RSP11093)
- 0.207 RKM-2018-004 (RSP11095)
- 0.211 RKM-2018-005 (RSP11096)
- 0.212 Thank You Jerry (RSP11459)
- 0.219 JL Cross 3 (RSP11504)
- 0.226 C Temple (RSP11643)
- 0.227 RKM-2018-017 (RSP11109)
- 0.227 RKM-2018-021 (RSP11113)
- 0.227 RKM-2018-032 (RSP11124)
- 0.230 Dominion Skunk (RSP11354)
- 0.230 GG 4 (RSP11461)
- 0.235 Dave Alaska (RSP11627)
- 0.237 Serious Happiness (RSP10763)
- 0.237 501st OG (RSP11241)
- 0.242 Pure Power Plant (RSP11265)
Nearest genetic relatives (Base Tree)
- 0.202 RKM-2018-002 (RSP11093)
- 0.208 RKM-2018-005 (RSP11096)
- 0.229 RKM-2018-032 (RSP11124)
- 0.248 Blueberry Cheesecake (RSP10684)
- 0.260 RKM-2018-034 (RSP11126)
- 0.278 Durban Poison (RSP11014)
- 0.283 RKM-2018-033 (RSP11125)
- 0.290 Hermaphrodite Research Sample1 (RSP11049)
- 0.297 Skywalker OG (RSP10837)
- 0.301 RKM-2018-009 (RSP11100)
- 0.305 Gold Cracker (RSP11048)
- 0.308 Liberty Haze (RSP11000)
- 0.312 RKM-2018-019 (RSP11111)
- 0.314 RKM-2018-029 (RSP11121)
- 0.318 Blueberry Cheesecake (RSP10672)
- 0.319 RKM-2018-020 (RSP11112)
- 0.320 QUEEN JESUS (RSP10105)
- 0.321 Blueberry Cheesecake (RSP10680)
- 0.325 RKM-2018-026 (RSP11118)
- 0.328 RKM-2018-003 (RSP11094)
Most genetically distant strains (All Samples)
- 0.480 Cbot-2019-005 (RSP11133)
- 0.474 AVIDEKEL 2 0 (RSP11174)
- 0.466 Tanao Sri-white 80 (RSP11621)
- 0.465 Ringo s Gift Katie s Cut (RSP11624)
- 0.463 Wife (RSP11148)
- 0.448 Cherry Blossom (RSP11311)
- 0.446 Squirrel Tail 81 (RSP11622)
- 0.445 Cherry Blossom (RSP11300)
- 0.442 Northern Skunk (RSP11456)
- 0.442 High Amperage (RSP11726)
- 0.436 Cherry Blossom (RSP11314)
- 0.436 Cherry Blossom (RSP11306)
- 0.435 Unknown- Cherry Wine - 001 (RSP11268)
- 0.433 2nd Gen Cherry (RSP11141)
- 0.433 Cherry Blossom (RSP11325)
- 0.432 Cherry Blossom (RSP11322)
- 0.432 Cherry Blossom (RSP11301)
- 0.431 80E (RSP11213)
- 0.430 Feral (RSP11205)
- 0.429 Tanao Sri 46 (RSP11486)
Most genetically distant strains (Base Tree)
- 0.483 Cbot-2019-005 (RSP11133)
- 0.436 Cherry (RSP11142)
- 0.420 Cherry (RSP11143)
- 0.418 Kush Hemp E1 (RSP11128)
- 0.415 JL yellow (RSP11075)
- 0.414 Cbot-2019-001 (RSP11129)
- 0.405 Monoica (RSP10241)
- 0.404 RKM-2018-028 (RSP11120)
- 0.404 USO 31 (RSP10981)
- 0.402 Fedora 17 (RSP10661)
- 0.402 Lovrin (RSP10658)
- 0.400 Futura 75 (RSP10664)
- 0.400 Feral (RSP10890)
- 0.400 Ivory (RSP10668)
- 0.393 RKM-2018-022 (RSP11114)
- 0.391 Jiangji (RSP10653)
- 0.384 Carmagnola (RSP11037)
- 0.382 RKM-2018-006 (RSP11097)
- 0.378 RKM-2018-027 (RSP11119)
- 0.378 Santhica27 (RSP11047)
Nearest genetic relative in Phylos dataset
- Overlapping SNPs:
- 74
- Concordance:
- 56
Nearest genetic relative in Lynch dataset
- Overlapping SNPs:
- 14
- Concordance:
- 11
Blockchain Registration Information
- Transaction ID
-
19eef9e3e40bfe51
d99c595a1b18ef7b 725c71154d626b6d faa2802a314459fa - Stamping Certificate
- Download PDF (39.5 KB)
- SHASUM Hash
-
491c3ea9fe4332bb
0ad3e44ba952ce0e 4857226147d31121 d5318147d5a09721