Wilburs Great Adventure

RSP 11727

Grower: Ragged wizard

General Information

Accession Date
December 17, 2020
Reported Plant Sex
Female

The strain rarity visualization shows how distant the strain is from the other cultivars in the Kannapedia database. The y-axis represents genetic distance, getting farther as you go up. The width of the visualization at any position along the y-axis shows how many strains there are in the database at that genetic distance. So, a common strain will have a more bottom-heavy shape, while uncommon and rare cultivars will have a visualization that is generally shifted towards the top.

Rarity: Rare
Most Distant Most Similar

Chemical Information

Cannabinoid and terpenoid information provided by the grower.

Cannabinoids

No information provided.

Terpenoids

No information provided.

Genetic Information

Plant Type
Type II

The bell curve in the heterozygosity visualization shows the distribution of heterozygosity levels for cannabis cultivars in the Kannapedia database. The green line shows where this particular strain fits within the distribution. Heterozygosity is associated with heterosis (aka hybrid vigor) but also leads to the production of more variable offspring. When plants have two genetically different parents, heterozygosity levels will be higher than if it has been inbred or backcrossed repeatedly.

Heterozygosity: 0.93%
Least Heterozygous Most Heterozygous

The ratio of reads mapped to Y-contigs to reads mapped to the whole Cannabis genome (Y-ratios) has been demonstrated to be strongly correlated with plant sex typing. This plot shows the distribution of Y-ratios for all samples in our database which were sequenced with the same method (panel or WGS) as this sample and where this sample falls in the distribution.

Y-Ratio Distribution: 0.0464
male female RSP11727

This chart represents the Illumina sequence coverage over the Bt/Bd allele. These are the three regions in the cannabis genome that impact THCA, CBDA, CBGA production. Coverage over the Active CBDAS gene is highly correlated with Type II and Type III plants as described by Etienne de Meijer. Coverage over the THCA gene is highly correlated with Type I and Type II plants but is anti-correlated with Type III plants. Type I plants require coverage over the inactive CBDA loci and no coverage over the Active CBDA gene. Lack of coverage over the Active CBDA and Active THCA allele are presumed to be Type IV plants (CBGA dominant). While deletions of entire THCAS and CBDAS genes are the most common Bt:Bd alleles observed, it is possible to have plants with these genes where functional expression of the enzyme is disrupted by deactivating point mutations (Kojoma et al. 2006).

Bt/Bd Allele Coverage

This chart represents the Illumina sequence coverage over the CBCA synthase gene.

CBCAS Coverage

Variants (THCAS, CBDAS, and CBCAS)

No variants to report

Variants (Select Genes of Interest)

PKSG-2a

UniProt

c.774G>A p.Met258Ile missense variant moderate contig700 1944616 C/T
NGS:
0.123
C90:
0.000
PKSG-2a

UniProt

c.67T>A p.Phe23Ile missense variant moderate contig700 1945567 A/T
NGS:
0.825
C90:
0.904
PKSG-2a

UniProt

c.31A>T p.Thr11Ser missense variant moderate contig700 1945603 T/A
NGS:
0.763
C90:
0.876
PKSG-2b

UniProt

c.1152T>A p.Asn384Lys missense variant moderate contig700 1950486 A/T
NGS:
0.715
C90:
0.895
PKSG-2b

UniProt

c.1132C>G p.Leu378Val missense variant moderate contig700 1950506 G/C
NGS:
0.717
C90:
0.000
PKSG-2b

UniProt

c.1117A>G p.Ile373Val missense variant moderate contig700 1950521 T/C
NGS:
0.807
C90:
0.981
PKSG-2b

UniProt

c.948T>G p.Asp316Glu missense variant moderate contig700 1950690 A/C
NGS:
0.456
C90:
0.000
PKSG-2b

UniProt

c.945T>G p.Ser315Arg missense variant moderate contig700 1950693 A/C
NGS:
0.454
C90:
0.000
PKSG-2b

UniProt

c.944G>A p.Ser315Asn missense variant moderate contig700 1950694 C/T
NGS:
0.445
C90:
0.000
PKSG-2b

UniProt

c.934C>G p.His312Asp missense variant moderate contig700 1950704 G/C
NGS:
0.410
C90:
0.000
PKSG-2b

UniProt

c.774G>A p.Met258Ile missense variant moderate contig700 1950864 C/T
NGS:
0.366
C90:
0.947
PKSG-2b

UniProt

c.31A>T p.Thr11Ser missense variant moderate contig700 1951851 T/A
NGS:
0.844
C90:
0.880
PKSG-2b

UniProt

c.-2_1dupATA start lost & conservative inframe insertion high contig700 1951880 A/ATAT
NGS:
0.410
C90:
0.000
PKSG-4b

UniProt

c.496A>G p.Lys166Glu missense variant moderate contig700 2721177 T/C
NGS:
0.651
C90:
0.684
PKSG-4b

UniProt

c.492G>C p.Glu164Asp missense variant moderate contig700 2721181 C/G
NGS:
0.048
C90:
0.000
PKSG-4b

UniProt

c.489delT p.Phe163fs frameshift variant high contig700 2721183 CA/C
NGS:
0.792
C90:
0.761
PKSG-4b

UniProt

c.485A>G p.Lys162Arg missense variant moderate contig700 2721188 T/C
NGS:
0.643
C90:
0.301
PKSG-4b

UniProt

c.431T>G p.Val144Gly missense variant moderate contig700 2721242 A/C
NGS:
0.575
C90:
0.679
PKSG-4b

UniProt

c.419A>G p.Asp140Gly missense variant moderate contig700 2721254 T/C
NGS:
0.430
C90:
0.440
PKSG-4b

UniProt

c.352_355delACAG p.Thr118fs frameshift variant high contig700 2721317 CCTGT/C
NGS:
0.529
C90:
0.000
PKSG-4b

UniProt

c.323A>G p.Glu108Gly missense variant moderate contig700 2721350 T/C
NGS:
0.469
C90:
0.000
DXR-2

UniProt

c.1319T>C p.Ile440Thr missense variant moderate contig380 285250 A/G
NGS:
0.480
C90:
0.000
DXR-2

UniProt

c.431C>G p.Ala144Gly missense variant moderate contig380 287760 G/C
NGS:
0.182
C90:
0.550
aPT4

UniProt

c.16G>A p.Val6Ile missense variant moderate contig121 2828672 G/A
NGS:
0.158
C90:
0.000
aPT4

UniProt

c.97T>C p.Tyr33His missense variant moderate contig121 2828753 T/C
NGS:
0.439
C90:
0.000
aPT4

UniProt

c.153A>C p.Lys51Asn missense variant moderate contig121 2828809 A/C
NGS:
0.375
C90:
0.000
aPT4

UniProt

c.235_236delGT p.Val79fs frameshift variant high contig121 2829030 ATG/A
NGS:
0.417
C90:
0.000
aPT4

UniProt

c.238delT p.Ser80fs frameshift variant high contig121 2829034 AT/A
NGS:
0.421
C90:
0.000
aPT4

UniProt

c.302A>G p.Asn101Ser missense variant moderate contig121 2829099 A/G
NGS:
0.349
C90:
0.000
aPT4

UniProt

c.1168T>C p.Tyr390His missense variant moderate contig121 2833503 T/C
NGS:
0.546
C90:
0.000
aPT1

UniProt

c.629C>T p.Thr210Ile missense variant moderate contig121 2840237 C/T
NGS:
0.561
C90:
0.598
HDS-2

UniProt

c.82_93delGTAACCGGAACT p.Val28_Thr31del conservative inframe deletion moderate contig95 1989748 CGTAACCGGAACT/C
NGS:
0.805
C90:
0.000
HDS-2

UniProt

c.127T>G p.Ser43Ala missense variant moderate contig95 1989794 T/G
NGS:
0.721
C90:
0.000
HDS-1

UniProt

c.-108+1_-108+2insG splice donor variant & intron variant high contig1891 889975 A/AC
NGS:
0.217
C90:
0.000

Nearest genetic relatives (All Samples)

0 0.058 0.117 0.175 0.233
clone distance sibling distance more distant
  1. 0.184 TI (RSP11149)
  2. 0.189 UP Sunrise (RSP10989)
  3. 0.202 Rest (RSP11377)
  4. 0.202 Calm (RSP11379)
  5. 0.203 Electra (RSP11366)
  6. 0.213 Trump x Trump (RSP11466)
  7. 0.213 Doug s Varin (RSP11243)
  8. 0.214 Serious Happiness (RSP10763)
  9. 0.215 Blue Dream (RSP11004)
  10. 0.217 Blue Dream (RSP11009)
  11. 0.218 Blueberry Cheesecake (RSP10684)
  12. 0.221 Danny Noonan (RSP11070)
  13. 0.221 T S A G E (RSP11351)
  14. 0.221 Blue Dream (RSP11010)
  15. 0.224 Joy (RSP11380)
  16. 0.227 Medxotic (RSP11410)
  17. 0.227 Queen Dream CBG (RSP11275)
  18. 0.227 Lift (RSP11378)
  19. 0.228 Lemon Skunk (RSP11229)
  20. 0.229 Blue Dream (RSP11017)

Nearest genetic relatives (Base Tree)

0 0.083 0.167 0.250 0.333
clone distance sibling distance more distant
  1. 0.200 UP Sunrise (RSP10989)
  2. 0.238 Blueberry Cheesecake (RSP10684)
  3. 0.261 Gold Cracker (RSP11048)
  4. 0.265 Cbot-2019-001 (RSP11129)
  5. 0.268 Liberty Haze (RSP11000)
  6. 0.270 Italian Kiss (RSP11034)
  7. 0.273 Blue Dream (RSP11033)
  8. 0.274 RKM-2018-006 (RSP11097)
  9. 0.276 CST (RSP11002)
  10. 0.280 RKM-2018-027 (RSP11119)
  11. 0.280 RKM-2018-020 (RSP11112)
  12. 0.282 RKM-2018-028 (RSP11120)
  13. 0.288 Durban Poison (RSP11014)
  14. 0.288 Hermaphrodite Research Sample1 (RSP11049)
  15. 0.290 RKM-2018-009 (RSP11100)
  16. 0.302 Kush Hemp E1 (RSP11128)
  17. 0.308 Cbot-2019-004 (RSP11132)
  18. 0.313 Sour Raspberry (RSP10551)
  19. 0.313 QUEEN JESUS (RSP10105)
  20. 0.314 Pie Hoe (RSP11073)

Most genetically distant strains (All Samples)

0 0.117 0.233 0.350 0.467
clone distance sibling distance more distant
  1. 0.450 Cherry Blossom (RSP11334)
  2. 0.450 Cherry Blossom (RSP11328)
  3. 0.447 CS (RSP11208)
  4. 0.443 80E (RSP11211)
  5. 0.438 Feral (RSP11205)
  6. 0.436 80E (RSP11213)
  7. 0.435 Cherry Blossom (RSP11317)
  8. 0.435 Unknown- Cherry Wine - 004 (RSP11271)
  9. 0.434 Cherry Blossom (RSP11311)
  10. 0.432 Carmagnola (RSP11202)
  11. 0.430 R3 (RSP11616)
  12. 0.429 Carmaleonte (RSP11207)
  13. 0.428 Deadhead OG (RSP11463)
  14. 0.427 Eden (RSP11411)
  15. 0.426 Cherry Blossom (RSP11314)
  16. 0.425 Feral (RSP10890)
  17. 0.425 Unknown- Cherry Wine - 001 (RSP11268)
  18. 0.424 JL 3rd Gen Father (RSP11196)
  19. 0.424 Feral (RSP10891)
  20. 0.423 R4 (RSP11617)

Most genetically distant strains (Base Tree)

0 0.117 0.233 0.350 0.467
clone distance sibling distance more distant
  1. 0.446 Feral (RSP10890)
  2. 0.424 Carmagnola (RSP11037)
  3. 0.421 RKM-2018-002 (RSP11093)
  4. 0.410 Santhica27 (RSP11047)
  5. 0.407 Kyrgyz Gold (RSP11054)
  6. 0.402 Ivory (RSP10668)
  7. 0.399 Black Beauty (RSP11035)
  8. 0.398 Monoica (RSP10241)
  9. 0.396 Carmagnola (RSP10979)
  10. 0.394 RKM-2018-034 (RSP11126)
  11. 0.393 Jiangji (RSP10653)
  12. 0.391 Tisza (RSP11044)
  13. 0.388 Fedora 17 (RSP10661)
  14. 0.385 KYRG-11 (RSP11051)
  15. 0.380 Lovrin (RSP10658)
  16. 0.380 Futura 75 (RSP10664)
  17. 0.377 RKM-2018-019 (RSP11111)
  18. 0.375 RKM-2018-022 (RSP11114)
  19. 0.375 Skywalker OG (RSP10837)
  20. 0.371 RKM-2018-026 (RSP11118)

Nearest genetic relative in Phylos dataset

Phylos Strain SRR8347176
Overlapping SNPs:
74
Concordance:
45

Nearest genetic relative in Lynch dataset

Lynch Strain SRR3495160
Overlapping SNPs:
4
Concordance:
4

Blockchain Registration Information

Transaction ID
a4c1bfb3fcf7c00f5658367fc30b42754288d4bb2e32520f71b96c2443dcca6f
Stamping Certificate
Download PDF (39.5 KB)
SHASUM Hash
27fd8639a4f405c5865b59e3f114536ba508ea7f266fbb7273e41c1aee5ec140
QR code for RSP11727

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