Banana Kush
RSP 11739
Grower: Atlas Seed
General Information
- Accession Date
- January 13, 2021
- Reported Plant Sex
- Female
- Report Type
- StrainSEEK v2 3.2Mb
The strain rarity visualization shows how distant the strain is from the other cultivars in the Kannapedia database. The y-axis represents genetic distance, getting farther as you go up. The width of the visualization at any position along the y-axis shows how many strains there are in the database at that genetic distance. So, a common strain will have a more bottom-heavy shape, while uncommon and rare cultivars will have a visualization that is generally shifted towards the top.
Chemical Information
Cannabinoid and terpenoid information provided by the grower.
Cannabinoids
No information provided.
Terpenoids
No information provided.
Genetic Information
- Plant Type
- Type I
File Downloads
The bell curve in the heterozygosity visualization shows the distribution of heterozygosity levels for cannabis cultivars in the Kannapedia database. The green line shows where this particular strain fits within the distribution. Heterozygosity is associated with heterosis (aka hybrid vigor) but also leads to the production of more variable offspring. When plants have two genetically different parents, heterozygosity levels will be higher than if it has been inbred or backcrossed repeatedly.
The ratio of reads mapped to Y-contigs to reads mapped to the whole Cannabis genome (Y-ratios) has been demonstrated to be strongly correlated with plant sex typing. This plot shows the distribution of Y-ratios for all samples in our database which were sequenced with the same method (panel or WGS) as this sample and where this sample falls in the distribution.

This chart represents the Illumina sequence coverage over the Bt/Bd allele. These are the three regions in the cannabis genome that impact THCA, CBDA, CBGA production. Coverage over the Active CBDAS gene is highly correlated with Type II and Type III plants as described by Etienne de Meijer. Coverage over the THCA gene is highly correlated with Type I and Type II plants but is anti-correlated with Type III plants. Type I plants require coverage over the inactive CBDA loci and no coverage over the Active CBDA gene. Lack of coverage over the Active CBDA and Active THCA allele are presumed to be Type IV plants (CBGA dominant). While deletions of entire THCAS and CBDAS genes are the most common Bt:Bd alleles observed, it is possible to have plants with these genes where functional expression of the enzyme is disrupted by deactivating point mutations (Kojoma et al. 2006).



This chart represents the Illumina sequence coverage over the CBCA synthase gene.

Variants (THCAS, CBDAS, and CBCAS)
Variants (Select Genes of Interest)
PKSG-2a | c.67T>A | p.Phe23Ile | missense variant | moderate | contig700 | 1945567 | A/T | |
PKSG-2a | c.31A>T | p.Thr11Ser | missense variant | moderate | contig700 | 1945603 | T/A | |
PKSG-2b | c.1152T>A | p.Asn384Lys | missense variant | moderate | contig700 | 1950486 | A/T | |
PKSG-2b | c.1132C>G | p.Leu378Val | missense variant | moderate | contig700 | 1950506 | G/C |
|
PKSG-2b | c.1117A>G | p.Ile373Val | missense variant | moderate | contig700 | 1950521 | T/C | |
PKSG-2b | c.774G>A | p.Met258Ile | missense variant | moderate | contig700 | 1950864 | C/T | |
PKSG-2b | c.31A>T | p.Thr11Ser | missense variant | moderate | contig700 | 1951851 | T/A | |
PKSG-4b |
c.535_545del |
p.Ile179fs | frameshift variant | high | contig700 | 2721127 |
CCCCACTCCAAT |
|
PKSG-4b | c.523C>T | p.His175Tyr | missense variant | moderate | contig700 | 2721150 | G/A | |
PKSG-4b | c.489delT | p.Phe163fs | frameshift variant | high | contig700 | 2721183 | CA/C | |
PKSG-4b |
c.353_354ins |
p.Gly119fs | frameshift variant | high | contig700 | 2721319 | T/TGG |
|
DXR-2 | c.1319T>C | p.Ile440Thr | missense variant | moderate | contig380 | 285250 | A/G |
|
aPT4 | c.35A>C | p.Gln12Pro | missense variant | moderate | contig121 | 2828691 | A/C |
|
aPT4 | c.80A>G | p.Lys27Arg | missense variant | moderate | contig121 | 2828736 | A/G |
|
aPT4 | c.202T>A | p.Leu68Ile | missense variant | moderate | contig121 | 2828858 | T/A |
|
aPT4 | c.216A>T | p.Lys72Asn | missense variant | moderate | contig121 | 2828872 | A/T |
|
aPT4 | c.916C>T | p.His306Tyr | missense variant & splice region variant | moderate | contig121 | 2832711 | C/T |
|
aPT4 | c.1111C>A | p.Leu371Ile | missense variant | moderate | contig121 | 2833296 | C/A |
|
aPT4 | c.1168T>C | p.Tyr390His | missense variant | moderate | contig121 | 2833503 | T/C |
|
aPT1 | c.160A>C | p.Thr54Pro | missense variant | moderate | contig121 | 2835867 | A/C | |
aPT1 | c.406A>G | p.Ile136Val | missense variant | moderate | contig121 | 2839605 | A/G | |
aPT1 | c.670T>A | p.Ser224Thr | missense variant | moderate | contig121 | 2840278 | T/A |
|
aPT1 | c.727G>T | p.Glu243* | stop gained | high | contig121 | 2841362 | G/T | |
aPT1 | c.864C>G | p.Asn288Lys | missense variant | moderate | contig121 | 2842407 | C/G | |
HDS-2 |
c.82_93delGT |
p.Val28_Thr3 |
conservative inframe deletion | moderate | contig95 | 1989748 |
CGTAACCGGAAC |
|
HDS-2 | c.127T>G | p.Ser43Ala | missense variant | moderate | contig95 | 1989794 | T/G |
|
HDS-1 |
c.-108+1_-10 |
splice donor variant & intron variant | high | contig1891 | 889975 | A/AC |
|
Nearest genetic relatives (All Samples)
- 0.177 Electra (RSP11366)
- 0.191 Lift (RSP11378)
- 0.193 UP Sunrise (RSP10989)
- 0.197 Serious Happiness (RSP10763)
- 0.205 Doug s Varin (RSP11243)
- 0.209 Blue Dream (RSP11007)
- 0.209 Black 84 (RSP11188)
- 0.212 Blue Dream (RSP11010)
- 0.213 Lifter (RSP11365)
- 0.216 Suver Haze (RSP11364)
- 0.218 Joy (RSP11380)
- 0.219 Blue Dream (RSP11017)
- 0.222 JL Cross 25 (RSP11526)
- 0.225 Calm (RSP11379)
- 0.227 Super Blue Dream (RSP11011)
- 0.228 RKM-2018-028 (RSP11120)
- 0.229 Blue Dream (RSP11009)
- 0.229 Blue Dream (RSP11006)
- 0.232 Domnesia (RSP11184)
- 0.233 Blue Dream (RSP11008)
Nearest genetic relatives (Base Tree)
- 0.208 UP Sunrise (RSP10989)
- 0.225 Liberty Haze (RSP11000)
- 0.229 RKM-2018-028 (RSP11120)
- 0.248 Durban Poison (RSP11014)
- 0.252 Blueberry Cheesecake (RSP10684)
- 0.260 Blue Dream (RSP11033)
- 0.260 RKM-2018-018 (RSP11110)
- 0.267 Sour Raspberry (RSP10551)
- 0.274 Hermaphrodite Research Sample1 (RSP11049)
- 0.274 RKM-2018-019 (RSP11111)
- 0.275 Cbot-2019-006 (RSP11134)
- 0.276 Italian Kiss (RSP11034)
- 0.279 RKM-2018-023 (RSP11115)
- 0.281 Golden Goat 2 (RSP10991)
- 0.283 QUEEN JESUS (RSP10105)
- 0.283 RKM-2018-003 (RSP11094)
- 0.288 RKM-2018-029 (RSP11121)
- 0.288 CST (RSP11002)
- 0.290 RKM-2018-027 (RSP11119)
- 0.291 Cherry (RSP11143)
Most genetically distant strains (All Samples)
- 0.463 Fatso (RSP11741)
- 0.447 RKM-2018-026 (RSP11118)
- 0.442 RKM-2018-012 (RSP11103)
- 0.437 Red Eye OG (RSP11190)
- 0.433 RKM-2018-002 (RSP11093)
- 0.433 Abacus (RSP11266)
- 0.427 Right Mark (RSP11628)
- 0.426 SFVxTK (RSP11072)
- 0.425 Chem 91 (RSP11185)
- 0.425 Noetic OG (RSP11455)
- 0.415 Skywalker OG (RSP10837)
- 0.413 Cherry Blossom (RSP11323)
- 0.413 Cherry Blossom (RSP11328)
- 0.409 JL yellow (RSP11075)
- 0.403 RKM-2018-013 (RSP11104)
- 0.403 501st OG (RSP11241)
- 0.401 Rugburn OG (RSP11353)
- 0.400 RKM-2018-034 (RSP11126)
- 0.399 JL 4th Gen 2 (RSP11194)
- 0.398 Deadhead OG (RSP11463)
Most genetically distant strains (Base Tree)
- 0.454 RKM-2018-026 (RSP11118)
- 0.432 Skywalker OG (RSP10837)
- 0.431 RKM-2018-002 (RSP11093)
- 0.406 RKM-2018-034 (RSP11126)
- 0.406 Kush Hemp E1 (RSP11128)
- 0.399 JL yellow (RSP11075)
- 0.395 Cbot-2019-005 (RSP11133)
- 0.378 Pie Hoe (RSP11073)
- 0.372 Santhica27 (RSP11047)
- 0.371 RKM-2018-032 (RSP11124)
- 0.368 Feral (RSP10890)
- 0.364 Monoica (RSP10241)
- 0.363 Kyrgyz Gold (RSP11054)
- 0.355 The Gift (RSP10988)
- 0.355 Carmagnola (RSP11037)
- 0.353 Carmagnola (RSP10979)
- 0.351 RKM-2018-020 (RSP11112)
- 0.350 RKM-2018-005 (RSP11096)
- 0.344 USO 31 (RSP10981)
- 0.344 Blueberry Cheesecake (RSP10680)
Nearest genetic relative in Phylos dataset
- Overlapping SNPs:
- 73
- Concordance:
- 53
Nearest genetic relative in Lynch dataset
- Overlapping SNPs:
- 2
- Concordance:
- 2
Blockchain Registration Information
- Transaction ID
-
926568ab179208c2
ef2bbceca5be8478 5c04639b795f7889 14370dc5280961ee - Stamping Certificate
- Download PDF (39.5 KB)
- SHASUM Hash
-
5c66c458ecf2681f
3872cbdff613f1e1 d47e46d8db092b3b 346f2a099f5f4f00